A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

S

s - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

s - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod

s - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition

Array for internal storage of singular values.

SAMPLE_SIZE_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator

Optional parameter to specify the treshold for the size of the random sample to use, must be an integer greater than 0.

sampleMinMax(Relation<O>, DistanceQuery<O, D>) - Method in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses

sampleSize - Variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator.Parameterizer

sampleSize - Variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator

Holds the value of DependencyDerivator.SAMPLE_SIZE_ID.

sampleSize - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD.Parameterizer

sampleSize - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

Variable to store fast mode sampling value.

samplesize - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints.Parameterizer

Holds the value of RandomGeneratedReferencePoints.N_ID.

samplesize - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints

Holds the value of RandomGeneratedReferencePoints.N_ID.

samplesize - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomSampleReferencePoints.Parameterizer

Holds the value of RandomSampleReferencePoints.N_ID.

samplesize - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomSampleReferencePoints

Holds the value of RandomSampleReferencePoints.N_ID.

sampling - Variable in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses.Parameterizer

Sampling

sampling - Variable in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses

Sampling

SAMPLING_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses

Flag to enable sampling

sanitizeName(String) - Static method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Return a sanitized version of the given string.

save() - Method in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile

Save the current data to the given file.

saveAsANY(File, int, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Save a file trying to auto-guess the file type.

saveAsEPS(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Transcode file to EPS.

saveAsJPEG(File, int, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Transcode file to JPEG.

saveAsJPEG(File, int, int) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Transcode file to JPEG.

saveAsPDF(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Transcode file to PDF.

saveAsPNG(File, int, int) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Transcode file to PNG.

saveAsPS(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Transcode file to PS.

saveAsSVG(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Save document into a SVG file.

saveButton - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

saveCurrentPlot() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Save/export the current plot.

saveCurrentPlot() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.SimpleSVGViewer

Save/export the current plot.

SAVED_SETTINGS_FILENAME - Static variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Filename for saved settings

savedCombo - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Combo box for saved settings

savedCombo - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel

The combo box to use

SavedSettingsFile - Class in de.lmu.ifi.dbs.elki.gui.util

Class to manage saved settings in a text file.

SavedSettingsFile(String) - Constructor for class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile

Constructor.

savedSettingsModel - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Model to link the combobox with

savedSettingsModel - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel

Settings combo box.

SavedSettingsTabPanel - Class in de.lmu.ifi.dbs.elki.gui.multistep.panels

Tab panel to manage saved settings.

SavedSettingsTabPanel(SavedSettingsFile, MultiStepGUI) - Constructor for class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel

Constructor.

SavedSettingsTabPanel.SettingsComboboxModel - Class in de.lmu.ifi.dbs.elki.gui.multistep.panels

Class to interface between the saved settings list and a JComboBox

SavedSettingsTabPanel.SettingsComboboxModel(SavedSettingsFile) - Constructor for class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel.SettingsComboboxModel

Constructor

SaveOptionsPanel - Class in de.lmu.ifi.dbs.elki.visualization.savedialog

A component (JPanel) which can be displayed in the save dialog to show additional options when saving as JPEG or PNG.

SaveOptionsPanel(JFileChooser, int, int) - Constructor for class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

Construct a new Save Options Panel.

scalarProduct(BitVector) - Method in class de.lmu.ifi.dbs.elki.data.BitVector

Provides the scalar product (inner product) of this BitVector and the given BitVector.

scalarProduct(DoubleVector) - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector

Provides the scalar product (inner product) of this and the given DoubleVector.

scalarProduct(FloatVector) - Method in class de.lmu.ifi.dbs.elki.data.FloatVector

Provides the scalar product (inner product) of this and the given FloatVector.

scalarProduct(IntegerVector) - Method in class de.lmu.ifi.dbs.elki.data.IntegerVector

Provides the scalar product (inner product) of this and the given IntegerVector.

scalarProduct(V) - Method in interface de.lmu.ifi.dbs.elki.data.NumberVector

Provides the scalar product (inner product) of this NumberVector of V and the given NumberVector of V.

scalarProduct(OneDimensionalDoubleVector) - Method in class de.lmu.ifi.dbs.elki.data.OneDimensionalDoubleVector

scalarProduct(SparseFloatVector) - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

Provides the scalar product (inner product) of this and the given SparseFloatVector.

scalarProduct(int, Matrix, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the scalar product of the colA column of this and the colB column of B.

scalarProduct(int, Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the scalar product of the colA column of this and the colB column of B.

scalarProduct(Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Returns the scalar product of this vector and the specified vector v.

scale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints.Parameterizer

Holds the value of RandomGeneratedReferencePoints.SCALE_ID.

scale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints

Holds the value of RandomGeneratedReferencePoints.SCALE_ID.

scale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints.Parameterizer

Holds the value of StarBasedReferencePoints.SCALE_ID.

scale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints

Holds the value of StarBasedReferencePoints.SCALE_ID.

scale - Variable in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

Scale to use

SCALE - Static variable in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection

Scaling constant.

SCALE - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Scaling constant.

SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints

Parameter for additional scaling of the space, to allow out-of-space reference points.

SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints

Parameter to specify the extra scaling of the space, to allow out-of-data-space reference points.

scaledmax - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.HeDESNormalizationOutlierScaling

Maximum after scaling

scaledmin - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.HeDESNormalizationOutlierScaling

Minimum after scaling

scales - Variable in class de.lmu.ifi.dbs.elki.visualization.projections.AbstractProjection

Scales in data set

scales - Variable in class de.lmu.ifi.dbs.elki.visualization.projector.HistogramProjector

Axis scales

scales - Variable in class de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector

Axis scales

Scales - Class in de.lmu.ifi.dbs.elki.visualization.scales

Scales helper class.

Scales() - Constructor for class de.lmu.ifi.dbs.elki.visualization.scales.Scales

scaleval - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling

Scaling value, set by MultiplicativeInverseScaling.prepare(de.lmu.ifi.dbs.elki.result.outlier.OutlierResult).

scaling - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore.Parameterizer

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.RescaleMetaOutlierAlgorithm.Parameterizer

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.RescaleMetaOutlierAlgorithm

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram.Parameterizer

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.evaluation.outlier.JudgeOutlierScores.Parameterizer

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.evaluation.outlier.JudgeOutlierScores

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.evaluation.similaritymatrix.ComputeSimilarityMatrixImage.Parameterizer

Scaling function to use

scaling - Variable in class de.lmu.ifi.dbs.elki.evaluation.similaritymatrix.ComputeSimilarityMatrixImage

Scaling function to use

scaling - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussStddevWeight

Constant scaling factor of Gaussian distribution.

scaling - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.QuadraticStddevWeight

Scaling: at scaling * stddev the function will hit 0.0

scaling - Variable in class de.lmu.ifi.dbs.elki.result.KMLOutputHandler.Parameterizer

Scaling function

scaling - Variable in class de.lmu.ifi.dbs.elki.result.KMLOutputHandler

Scaling function

scaling - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization.Factory.Parameterizer

Scaling function to use for Bubbles

scaling - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization.Factory

Scaling function to use for Bubbles

scaling - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization

Scaling function to use for Bubbles

SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore.Parameterizer

Parameter to specify a scaling function to use.

SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.RescaleMetaOutlierAlgorithm

Parameter to specify a scaling function to use.

SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram

Parameter to specify a scaling function to use.

SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.evaluation.outlier.JudgeOutlierScores

Parameter to specify a scaling function to use.

SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.evaluation.similaritymatrix.ComputeSimilarityMatrixImage

OptionID for the scaling function to use

SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.result.KMLOutputHandler.Parameterizer

Parameter for scaling functions Key: -kml.scaling

SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization.Factory

Parameter for scaling functions Key: -bubble.scaling

ScalingFunction - Interface in de.lmu.ifi.dbs.elki.utilities.scaling

Interface for scaling functions used e.g. by outlier evaluation such as Histograms and visualization.

ScatterPlotFactory - Class in de.lmu.ifi.dbs.elki.visualization.projector

Produce scatterplot projections.

ScatterPlotFactory(int) - Constructor for class de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotFactory

Constructor.

ScatterPlotFactory.Parameterizer - Class in de.lmu.ifi.dbs.elki.visualization.projector

Parameterization class.

ScatterPlotFactory.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotFactory.Parameterizer

ScatterPlotProjector<V extends NumberVector<?,?>> - Class in de.lmu.ifi.dbs.elki.visualization.projector

ScatterPlotProjector is responsible for producing a set of scatterplot visualizations.

ScatterPlotProjector(Relation<V>, int) - Constructor for class de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector

Constructor.

scheduleDetach(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas

Schedule a detach.

scheduleUpdate(Runnable) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Schedule an update.

scomparator - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.PairUtil.Compare

A comparator for type FIRST.

scomparator - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.PairUtil.CompareSwapped

A comparator for type FIRST.

SCORE_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore.Parameterizer

Parameter that specifies the object score pattern Key: -externaloutlier.scorepattern

scorepattern - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore.Parameterizer

object score pattern

scorepattern - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore

object score pattern

scores - Variable in class de.lmu.ifi.dbs.elki.evaluation.roc.ROC.OutlierScoreAdapter

Outlier score

scores - Variable in class de.lmu.ifi.dbs.elki.result.outlier.OrderingFromRelation

Outlier scores.

scores - Variable in class de.lmu.ifi.dbs.elki.result.outlier.OutlierResult

Outlier scores.

scores - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.RankingPseudoOutlierScaling

The actual scores

SCPair<FIRST,SECOND extends Comparable<? super SECOND>> - Class in de.lmu.ifi.dbs.elki.utilities.pairs

Pair that can only be compared by it's second component.

SCPair(FIRST, SECOND) - Constructor for class de.lmu.ifi.dbs.elki.utilities.pairs.SCPair

Initialize pair

SCREEN - Static variable in class de.lmu.ifi.dbs.elki.data.images.BlendComposite

"Screen" blending.

screenheight - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot

Screen size (used for thumbnail sizing)

screenwidth - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot

Screen size (used for thumbnail sizing)

second - Variable in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBIDPair

Second value in pair

second - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessEqualGlobalConstraint

Second number parameter.

second - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessGlobalConstraint

Second number parameter.

second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair

second value

second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair

second value

second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleObjPair

Second object value

second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair

second value

second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair

second value

second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair

Second value in pair

second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

Second value

secondAssignments - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

The assignments to the second routing object.

secondCoveringRadius - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

The second covering radius.

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS.Parameterizer

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS

Holds the value of ORCLUS.SEED_ID.

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.EM.Parameterizer

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.EM

Holds the value of EM.SEED_ID.

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.KMeans.Parameterizer

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.KMeans

Holds the value of KMeans.SEED_ID.

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS.Parameterizer

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS

Holds the value of PROCLUS.SEED_ID.

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuEvolutionary.Parameterizer

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuEvolutionary

Holds the value of AggarwalYuEvolutionary.SEED_ID.

seed - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.FeatureBagging.Parameterizer

Random generator seed

seed - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.ShuffleObjectsFilter.Parameterizer

seed - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.ShuffleObjectsFilter

Seed for randomly shuffling the rows of the database.

seed - Variable in class de.lmu.ifi.dbs.elki.datasource.RandomDoubleVectorDatabaseConnection.Parameterizer

seed - Variable in class de.lmu.ifi.dbs.elki.datasource.RandomDoubleVectorDatabaseConnection

Seed to use

seed - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.RandomStableDistanceFunction

Seed for reproducible random.

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS

Parameter to specify the random generator seed.

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.EM

Parameter to specify the random generator seed.

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.KMeans

Parameter to specify the random generator seed.

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS

Parameter to specify the random generator seed.

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuEvolutionary

Parameter to specify the random generator seed.

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.FeatureBagging.Parameterizer

The parameter to specify the random seed Key: -fbagging.seed

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.filter.ShuffleObjectsFilter

Optional parameter to specify a seed for randomly shuffling the rows of the database.

SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.RandomDoubleVectorDatabaseConnection.Parameterizer

Random generator seed.

selcss - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot

The CSS class used on "selectable" rectangles.

selected - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

Selected entry

selected - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel.SettingsComboboxModel

Selected entry

SELECTED_ATTRIBUTES_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.filter.AbstractFeatureSelectionFilter

Selected attributes parameter.

SELECTED_ATTRIBUTES_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.filter.SplitNumberVectorFilter.Parameterizer

The parameter listing the split dimensions.

selectedAttributes - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.AbstractFeatureSelectionFilter.Parameterizer

selectedAttributes - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.AbstractFeatureSelectionFilter

Keeps the selection of the subspace to project onto.

selectedAttributes - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.AbstractRandomFeatureSelectionFilter

The selected attributes

SELECTEDHULL - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionConvexHullVisualization

Generic tag to indicate the type of element.

selectedIds - Variable in class de.lmu.ifi.dbs.elki.result.DBIDSelection

Selected IDs

selection - Variable in class de.lmu.ifi.dbs.elki.result.SelectionResult

The actual selection

SELECTION - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Selection color and opacity

SELECTION - Static variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerContext

Identifier for the selection

SELECTION_ACTIVE - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Selection color and opacity during selecting process

SelectionConvexHullVisualization<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Visualizer for generating an SVG-Element containing the convex hull of the selected points

SelectionConvexHullVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionConvexHullVisualization

Constructor.

SelectionConvexHullVisualization.Factory<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Factory for visualizers to generate an SVG-Element containing the convex hull of the selected points

SelectionConvexHullVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionConvexHullVisualization.Factory

Constructor

SelectionCubeVisualization<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Visualizer for generating an SVG-Element containing a cube as marker representing the selected range for each dimension

SelectionCubeVisualization(VisualizationTask, boolean) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionCubeVisualization

SelectionCubeVisualization.Factory<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Factory for visualizers to generate an SVG-Element containing a cube as marker representing the selected range for each dimension

SelectionCubeVisualization.Factory(boolean) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionCubeVisualization.Factory

Constructor.

SelectionCubeVisualization.Factory.Parameterizer<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Parameterization class.

SelectionCubeVisualization.Factory.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionCubeVisualization.Factory.Parameterizer

SelectionDotVisualization<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Visualizer for generating an SVG-Element containing dots as markers representing the selected Database's objects.

SelectionDotVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionDotVisualization

Constructor.

SelectionDotVisualization.Factory<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Factory for visualizers to generate an SVG-Element containing dots as markers representing the selected Database's objects.

SelectionDotVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionDotVisualization.Factory

Constructor

selectionMatrixOfStrongEigenvectors() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns a copy of the selection matrix of the strong eigenvectors (E_czech) of this LocalPCA.

selectionMatrixOfWeakEigenvectors() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns a copy of the selection matrix of the weak eigenvectors (E_hat) of the object to which this PCA belongs to.

SelectionResult - Class in de.lmu.ifi.dbs.elki.result

Selection result wrapper.

SelectionResult() - Constructor for class de.lmu.ifi.dbs.elki.result.SelectionResult

Constructor.

SelectionTableWindow - Class in de.lmu.ifi.dbs.elki.visualization.gui

Visualizes selected Objects in a JTable, objects can be selected, changed and deleted

SelectionTableWindow(VisualizerContext) - Constructor for class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow

The actual visualization instance, for a single projection

SelectionTableWindow.DatabaseTableModel - Class in de.lmu.ifi.dbs.elki.visualization.gui

View onto the database

SelectionTableWindow.DatabaseTableModel() - Constructor for class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow.DatabaseTableModel

SelectionToolCubeVisualization<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Tool-Visualization for the tool to select ranges

SelectionToolCubeVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolCubeVisualization

Constructor.

SelectionToolCubeVisualization.Factory<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Factory for tool visualizations for selecting ranges and the inclosed objects

SelectionToolCubeVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolCubeVisualization.Factory

Constructor, adhering to Parameterizable

SelectionToolDotVisualization<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Tool-Visualization for the tool to select objects

SelectionToolDotVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolDotVisualization

Constructor.

SelectionToolDotVisualization.Factory<NV extends NumberVector<NV,?>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Factory for tool visualizations for selecting objects

SelectionToolDotVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolDotVisualization.Factory

Constructor, adhering to Parameterizable

SelectionToolDotVisualization.Mode - Enum in de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d

Input modes

SelectionToolDotVisualization.Mode() - Constructor for enum de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolDotVisualization.Mode

selectivity(double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique.CLIQUEUnit

Returns the selectivity of this unit, which is defined as the fraction of total feature vectors contained in this unit.

SEPARATOR - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.CorrelationDistance

The component separator used by correlation distances.

SEPARATOR - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

Indicates a separator.

SEPARATOR - Static variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream

String to separate different entries while printing.

separatorPattern - Variable in class de.lmu.ifi.dbs.elki.data.HierarchicalClassLabel

Holds the Pattern to separate different levels parsing input.

separatorString - Variable in class de.lmu.ifi.dbs.elki.data.HierarchicalClassLabel

A String to separate different levels in a String representation of this HierarchicalClassLabel.

SER_MARKER - Static variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream

Marker used in text serialization (and re-parsing)

serialize() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization

Serialize parameters.

serialize(StringBuffer) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager

Serialize managed CSS classes to rule file.

SerializedParameterization - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization

Manage a parameterization serialized as String array, e.g. from command line.

SerializedParameterization() - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization

Constructor

SerializedParameterization(String[]) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization

Constructor

SerializedParameterization(List<String>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization

Constructor

serializeParameters() - Method in class de.lmu.ifi.dbs.elki.gui.multistep.MultiStepGUI

Get the serialized parameters

serializeParameters() - Method in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters

Serialize parameters into an array list to pass to setParameters()

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Serial version number

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.application.jsmap.JSONBuffer.JSONException

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow.SeriesLabelRenderer

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.data.Bit

Generated serial version UID.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.data.HyperBoundingBox

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.data.LabelList

Serial number

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.data.ModifiableHyperBoundingBox

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.data.RationalNumber

Generated serial version UID.

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.data.type.NoSupportedDataTypeException

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent

Serialization ID since Java EventObjects are expected to be serializable.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.database.ids.generic.GenericArrayModifiableDBIDs

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.database.ids.generic.GenericHashSetModifiableDBIDs

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.database.ids.generic.GenericTreeSetModifiableDBIDs

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.datasource.bundle.BundleMeta

Serial version

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.datasource.filter.NonNumericFeaturesException

Generated serial version UID.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.BitDistance

Generated serial version UID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.CorrelationDistance

Generated SerialVersionUID.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance

Generated serialVersionUID.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

Generated serialVersionUID.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance

Created serial version UID.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.PCACorrelationDistance

Serial

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.PreferenceVectorBasedCorrelationDistance

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

Serial version number.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.configurator.ClassListParameterConfigurator.SuperPopup

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.configurator.ConfiguratorPanel

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.MultiStepGUI

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.AlgorithmTabPanel

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.EvaluationTabPanel

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.InputTabPanel

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.LoggingTabPanel

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.OutputTabPanel

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel.SettingsComboboxModel

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.LogPane

Serialization version number

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.LogPanel

Serial

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.AdjustingEditor

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ClassListEditor

Serial version number

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ClassListEditor.SuperPopup

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ColorfulRenderer

Serial Version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.DropdownEditor

Serial Version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.FileNameEditor

Serial version number

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.KNNChangeEvent

Serialization ID since Java EventObjects are expected to be serializable.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppDirectoryEntry

Serial version UID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppLeafEntry

Serial Version UID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTreeNode

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.PolynomialApproximation

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ApproximationLine

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPDirectoryEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTreeNode

Serial version UID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxDirectoryEntry

Serial version UID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxLeafEntry

Serial version number

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTreeNode

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabDirectoryEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabLeafEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabTreeNode

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree.MTreeNode

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluDirectoryEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluLeafEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluNode

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar.RStarTreeNode

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialPointLeafEntry

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord

Serial Version UID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.logging.progress.ProgressLogRecord

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.Centroid

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.ProjectedCentroid

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.QRDecomposition

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.persistent.AbstractPage

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskUpperTriangleMatrix

Serial number, also used for generating a magic

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.AnyMap

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.HashMapList

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.Heap

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.KNNHeap

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.KNNList

Serial ID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.TiedTopBoundedHeap

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.TopBoundedHeap

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.designpattern.Observers

Serial version

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException

Serial UID.

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.exceptions.APIViolationException

Serial version

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.exceptions.ObjectNotFoundException

Serial version

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.InternalParameterizationErrors

Serial version ID

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.NoParameterValueException

Serial version UID

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnspecifiedParameterException

Serial UID

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException

Generated serial version UID.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas

Serial version number.

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.visualization.css.CSSClass.InvalidCSS

Serial version UID.

serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict

Serial version UID

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.DetailViewSelectedEvent

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow.DatabaseTableModel

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.SimpleSVGViewer

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.VisualizationTask

Serial number

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerContext

Serial version.

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent

Serial version

serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.events.ResizedEvent

Serial version

SERIESID - Static variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

SVG graph object ID (for replacing)

SERIESID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.CurveVisFactory

SVG class name for plot line

SERIESID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.HistogramVisFactory

CSS class name for the series.

seriesList - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

server - Variable in class de.lmu.ifi.dbs.elki.application.jsmap.JSONResultHandler

The actual web server

server - Variable in class de.lmu.ifi.dbs.elki.application.jsmap.JSONWebServer

Server instance

set(DBID, Double) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult

set(DBID, int, T) - Method in class de.lmu.ifi.dbs.elki.database.datastore.memory.ArrayRecordStore

Actual setter

set(DBID, int, T) - Method in class de.lmu.ifi.dbs.elki.database.datastore.memory.MapRecordStore

Actual setter

set(DBID, String) - Method in class de.lmu.ifi.dbs.elki.database.relation.ConvertToStringView

set(DBID, DBID) - Method in class de.lmu.ifi.dbs.elki.database.relation.DBIDView

set(DBID, O) - Method in class de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation

set(DBID, O) - Method in class de.lmu.ifi.dbs.elki.database.relation.ProxyView

set(DBID, O) - Method in interface de.lmu.ifi.dbs.elki.database.relation.Relation

Set an object representation.

set(int, int, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Set a single element.

set(int, int, double) - Method in interface de.lmu.ifi.dbs.elki.math.linearalgebra.MatrixLike

Set a single element.

set(int, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Sets the value at the specified row.

set(int, int, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

set(DBID, DBID) - Method in class de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult.PredecessorAdapter

set(DBID, D) - Method in class de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult.ReachabilityDistanceAdapter

set(int, DistanceResultPair<D>) - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.KNNList

set - Variable in class de.lmu.ifi.dbs.elki.utilities.InspectionUtil.DirClassIterator

set(E) - Method in class de.lmu.ifi.dbs.elki.utilities.iterator.ReverseListIterator

set(T) - Method in class de.lmu.ifi.dbs.elki.utilities.iterator.UnmodifiableListIterator

SET - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag

Constant indicating that the flag is set.

setActualMaximum(double) - Method in class de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta

setActualMinimum(double) - Method in class de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta

setAtt(Element, String, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Set a SVG attribute

setAtt(Element, String, int) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Set a SVG attribute

setAtt(Element, String, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Set a SVG attribute

setCached(String, String, T) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

Set a cache value

setCacheSize(int) - Method in class de.lmu.ifi.dbs.elki.persistent.LRUCache

Sets the maximum size of this cache.

setCentroid(V) - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationModel

Assign new Centroid

setClipping(Vector, Vector) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Set a clipping box. min needs to be smaller than max in each component.

setColumn(int, Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Sets the jth column of this matrix to the specified column.

setColumnVector(int, Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Sets the jth column of this matrix to the specified column.

setCompleted() - Method in class de.lmu.ifi.dbs.elki.logging.progress.IndefiniteProgress

Deprecated.

setCompleted(Logging) - Method in class de.lmu.ifi.dbs.elki.logging.progress.IndefiniteProgress

Set the completion flag and log it

setCompleted() - Method in class de.lmu.ifi.dbs.elki.logging.progress.StepProgress

Deprecated.

setCompleted(Logging) - Method in class de.lmu.ifi.dbs.elki.logging.progress.StepProgress

Mark the progress as completed and log it.

setConservativeKnnDistanceApproximation(ApproximationLine) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPDirectoryEntry

Sets the conservative approximation line

setConservativeKnnDistanceApproximation(ApproximationLine) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPEntry

Sets the conservative approximation line

setConservativeKnnDistanceApproximation(ApproximationLine) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry

Sets the conservative approximation line

setCovarianceMatrix(Matrix) - Method in class de.lmu.ifi.dbs.elki.data.model.EMModel

setCovarianceMatrixBuilder(CovarianceMatrixBuilder<V>) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCARunner

Set covariance matrix builder.

setCoveringRadius(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry

Sets the covering radius of this entry.

setCoveringRadius(D) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry

Sets the covering radius of this entry if this entry is a directory entry, throws an UnsupportedOperationException otherwise.

setCoveringRadius(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry

Throws an UnsupportedOperationException, since a leaf entry has no covering radius.

setCSSClass(Element, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Set the CSS class of an Element.

setCurrent(IntIntPair) - Method in class de.lmu.ifi.dbs.elki.evaluation.paircounting.generator.PairSortedGenerator

Set the current pair.

SetDBIDs - Interface in de.lmu.ifi.dbs.elki.database.ids

Interface for DBIDs that support fast "set" operations, in particular "contains" lookups.

setDefaultHandlerVisualizer() - Static method in class de.lmu.ifi.dbs.elki.workflow.OutputStep

Set the default handler to the ResultVisualizer.

setDefaultHandlerWriter() - Static method in class de.lmu.ifi.dbs.elki.workflow.OutputStep

Set the default handler to the ResultWriter.

setDefaultLevel(Level) - Static method in class de.lmu.ifi.dbs.elki.logging.LoggingConfiguration

Set the default level.

setDefaultValue(T) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Sets the default value of this parameter.

setDensityCorrection(double) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Set density correction factor.

setDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID

Sets the description of this OptionID.

setDimension(int) - Method in class de.lmu.ifi.dbs.elki.data.model.DimensionModel

Set cluster dimensionality

setDimensionality(int) - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

Sets the dimensionality to the new value.

setDirty(boolean) - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractPage

Sets the dirty flag of this page.

setDirty(boolean) - Method in interface de.lmu.ifi.dbs.elki.persistent.Page

Sets the dirty flag of this page.

setDisableInteractions(boolean) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Disable Batik predefined interactions.

setDiscarded(int) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Notify cluster of discarded points.

setDistance(D) - Method in interface de.lmu.ifi.dbs.elki.database.query.DistanceResultPair

Setter for first

setDistance(DoubleDistance) - Method in class de.lmu.ifi.dbs.elki.database.query.DoubleDistanceResultPair

setDistance(D) - Method in class de.lmu.ifi.dbs.elki.database.query.GenericDistanceResultPair

Setter for first

setDistanceQuery(DistanceQuery<O, D>) - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.ProxyDistanceFunction

setDocument(Document) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas

Deprecated. Document cannot be synchronized - use JSVGSynchronizedCanvas.setPlot(de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot) and a SVGPlot object!

setEmptyPagesSize(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

Set the size required by the listing of empty pages.

setExpanded(SpatialEntry, SpatialEntry) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTree

Marks the nodes with the specified ids as expanded.

setFirst(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair

Set first value

setFirst(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair

Set first value

setFirst(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair

Set first value

setFirst(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair

Set first value

setFirst(FIRST) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair

Setter for first

setFirst(FIRST) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

Setter for first

setForceincomments(boolean) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream

Set the force-in-comments flag.

setFormat(String) - Method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

setGzipCompression(boolean) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.MultipleFilesOutput

Set GZIP compression flag.

setHandled(DBID, O) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTreeIndex

Marks the specified object as handled and returns the path of node ids from the root to the objects's parent.

setHasHandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluDirectoryEntry

setHasHandled(boolean) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluEntry

Sets the flag to marks the node (or its child nodes) which is represented by this entry to contain handled data objects.

setHasHandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluLeafEntry

setHasUnhandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluDirectoryEntry

setHasUnhandled(boolean) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluEntry

Sets the flag to marks the node (or its child nodes) which is represented by this entry to contain unhandled data objects.

setHasUnhandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluLeafEntry

setHeight(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Sets the height of this R*-Tree.

setHierarchy(ResultHierarchy) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult

setHierarchy(Hierarchy<Cluster<M>>) - Method in class de.lmu.ifi.dbs.elki.data.Cluster

Set hierarchy object

setHierarchy(ResultHierarchy) - Method in class de.lmu.ifi.dbs.elki.result.AbstractHierarchicalResult

setHierarchy(ResultHierarchy) - Method in interface de.lmu.ifi.dbs.elki.result.HierarchicalResult

Set (exchange) the hierarchy implementation (e.g. after merging!)

setHierarchy(ResultHierarchy) - Method in class de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult.PredecessorAdapter

setHierarchy(ResultHierarchy) - Method in class de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult.ReachabilityDistanceAdapter

setID(DBID) - Method in interface de.lmu.ifi.dbs.elki.database.query.DistanceResultPair

Setter for second

setID(DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.DoubleDistanceResultPair

setID(DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.GenericDistanceResultPair

Setter for second

setIDs(DBIDs) - Method in class de.lmu.ifi.dbs.elki.data.Cluster

Access group object

setInvertedRows(DBIDs) - Method in class de.lmu.ifi.dbs.elki.data.model.BiclusterWithInverted

Sets the ids of the inverted rows.

setKnnDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxDirectoryEntry

setKnnDistance(D) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxEntry

Sets the knn distance of the entry.

setKnnDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxLeafEntry

setKnnDistanceApproximation(PolynomialApproximation) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppDirectoryEntry

Sets the polynomial approximation.

setKnnDistanceApproximation(PolynomialApproximation) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppEntry

Sets the polynomial approximation.

setKnnDistanceApproximation(PolynomialApproximation) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppLeafEntry

Sets the polynomial approximation.

setKnnDistances(List<D>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabDirectoryEntry

setKnnDistances(List<D>) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabEntry

Sets the knn distances of the entry.

setKnnDistances(List<D>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabLeafEntry

setLargestPageID(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

setLes(LinearEquationSystem) - Method in class de.lmu.ifi.dbs.elki.data.model.LinearEquationModel

Assign new Linear Equation System.

setLevelFor(String, String) - Static method in class de.lmu.ifi.dbs.elki.logging.LoggingConfiguration

Set the logging level for a particular package/class.

setMatrix(int, int, int, int, Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Set a submatrix.

setMatrix(int[], int[], Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Set a submatrix.

setMatrix(int[], int, int, Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Set a submatrix.

setMatrix(int, int, int[], Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Set a submatrix.

setMax(int, double) - Method in class de.lmu.ifi.dbs.elki.data.ModifiableHyperBoundingBox

Set the maximum bound in dimension dimension to value value.

setMBR(HyperBoundingBox) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

Sets the MBR of this entry.

setMean(V) - Method in class de.lmu.ifi.dbs.elki.data.model.MeanModel

setMib(double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepDownArea

Update the maximum in-between value

setMin(int, double) - Method in class de.lmu.ifi.dbs.elki.data.ModifiableHyperBoundingBox

Set the minimum bound in dimension dimension to value value.

setModel(M) - Method in class de.lmu.ifi.dbs.elki.data.Cluster

Access model object

setName(String) - Method in class de.lmu.ifi.dbs.elki.data.Cluster

Set Cluster name

setName(String) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Set the class name.

setNextPageID(int) - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractStoringPageFile

Sets the next page id.

setNextPageID(int) - Method in class de.lmu.ifi.dbs.elki.persistent.LRUCache

setNextPageID(int) - Method in interface de.lmu.ifi.dbs.elki.persistent.PageFile

Sets the next page id.

setNextPageID(int) - Method in class de.lmu.ifi.dbs.elki.persistent.PersistentPageFile

Set the next page id to the given value.

setNoise(boolean) - Method in class de.lmu.ifi.dbs.elki.data.Cluster

Setter for noise flag.

setOptional(boolean) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Specifies if this parameter is an optional parameter.

setPageID(int) - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractPage

Sets the unique id of this Page.

setPageID(P) - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractStoringPageFile

Sets the id of the given page.

setPageID(P) - Method in class de.lmu.ifi.dbs.elki.persistent.LRUCache

setPageID(int) - Method in interface de.lmu.ifi.dbs.elki.persistent.Page

Sets the unique id of this Page.

setPageID(P) - Method in interface de.lmu.ifi.dbs.elki.persistent.PageFile

Sets the id of the given page.

setParameters(Parameterization) - Method in class de.lmu.ifi.dbs.elki.gui.multistep.MultiStepGUI

Set the parameters.

setParameters(Parameterization) - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Do the actual setParameters invocation.

setParentDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry

Sets the distance from the object to its parent object.

setParentDistance(D) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry

Sets the distance from the routing object to routing object of its parent.

setParentDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry

Sets the distance from the underlying data object to its parent's routing object.

setPCAResult(PCAFilteredResult) - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationModel

Assign new PCA result

setPlot(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas

Choose a new plot to display.

setPlot(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.SimpleSVGViewer

Set the plot to show

setPoints(LinkedList<Vector>) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Set the list of points in the cluster

setProcessed(int) - Method in class de.lmu.ifi.dbs.elki.logging.progress.AbstractProgress

Sets the number of items already processed at a time being.

setProcessed(int, Logging) - Method in class de.lmu.ifi.dbs.elki.logging.progress.AbstractProgress

Sets the number of items already processed at a time being.

setProcessed(int) - Method in class de.lmu.ifi.dbs.elki.logging.progress.FiniteProgress

Sets the number of items already processed at a time being.

setProgressiveKnnDistanceApproximation(ApproximationLine) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry

Sets the progressive approximation line

setRatio(double) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.detail.DetailView

Set the plot ratio

setRatio(double) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot

setRatio(double) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Change the plot ratio.

setRkNNReach(RKNNQuery<O, D>) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.LOF.LOFResult

Sets the RkNN query w.r.t. the reachability distance.

setRkNNRefer(RKNNQuery<O, D>) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.LOF.LOFResult

Sets the RkNN query w.r.t. the reference neighborhood distance.

setRoutingObjectID(DBID) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry

Sets the id of the routing object of this entry.

setRoutingObjectID(DBID) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry

Sets the id of the underlying database object of this entry, if this entry is a leaf entry, the id of the routing object, otherwise.

setRoutingObjectID(DBID) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry

todo ok

setRow(int, Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Sets the jth row of this matrix to the specified vector.

setRowVector(int, Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Sets the jth row of this matrix to the specified vector.

setSecond(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair

Set second value

setSecond(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair

Set second value

setSecond(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair

Set second value

setSecond(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair

Set second value

setSecond(SECOND) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair

Setter for second

setSecond(SECOND) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

Setter for second

setSelectedAttributes(BitSet) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.AbstractFeatureSelectionFilter

Sets the bits set to true in the given BitSet as selected attributes in AbstractFeatureSelectionFilter.SELECTED_ATTRIBUTES_ID.

setSelectedDimensions(BitSet) - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractDimensionsSelectingDoubleDistanceFunction

Sets the selected dimensions according to the set bits in the given BitSet.

setSelectedItem(Object) - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

setSelectedItem(Object) - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel.SettingsComboboxModel

setSelection(DBIDSelection) - Method in class de.lmu.ifi.dbs.elki.result.SelectionResult

setSelection(DBIDSelection) - Method in class de.lmu.ifi.dbs.elki.visualization.VisualizerContext

Set a new selection.

setShortDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Sets the short description of the option.

setSourceClassName(String) - Method in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord

setSourceMethodName(String) - Method in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord

setStatement(String, String) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Set a CSS statement.

setStatement(String, int) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Set a CSS statement.

setStatement(String, double) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Set a CSS statement.

setStyle(Element, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Set a SVG style attribute

setSVGDocument(SVGDocument) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas

Deprecated. Document cannot be synchronized - use JSVGSynchronizedCanvas.setPlot(de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot) and a SVGPlot object!

setSVGRect(SVGPlot, Projection2D) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionCubeVisualization

Generates a cube and a frame depending on the selection stored in the context

setSynchronizedRunner(JSVGUpdateSynchronizer.JSVGSynchronizedRunner) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer

Set the current update runner

setTab - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.MultiStepGUI

setTestAgainstModel(boolean) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorMain

Set the value of the GeneratorMain.testAgainstModel flag

setThird(THIRD) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

Setter for third

settings - Variable in class de.lmu.ifi.dbs.elki.KDDTask.Parameterizer

settings - Variable in class de.lmu.ifi.dbs.elki.KDDTask

The settings used, for settings reporting.

settings - Variable in class de.lmu.ifi.dbs.elki.result.SettingsResult

Settings storage.

SettingsResult - Class in de.lmu.ifi.dbs.elki.result

Result that keeps track of settings that were used in generating this particular result.

SettingsResult(Collection<Pair<Object, Parameter<?, ?>>>) - Constructor for class de.lmu.ifi.dbs.elki.result.SettingsResult

Constructor.

SettingsVisFactory - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj

Pseudo-Visualizer, that lists the settings of the algorithm-

SettingsVisFactory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.SettingsVisFactory

Constructor, adhering to Parameterizable

setupBundleHeaders(ArrayList<String>, int[], TypeInformation[], int[], MultipleObjectsBundle, boolean) - Method in class de.lmu.ifi.dbs.elki.datasource.parser.ArffParser

Setup the headers for the object bundle.

setupCanvas(SVGPlot, Projection2D, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.P2DVisualization

Utility function to setup a canvas element for the visualization.

setupCSS(SVGPlot, int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis1d.P1DHistogramVisualizer

Generate the needed CSS classes.

setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.AbstractTooltipVisualization

Registers the Tooltip-CSS-Class at a SVGPlot.

setupCSS(SVGPlot, Clustering<? extends Model>) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization

Registers the Bubble-CSS-Class at a SVGPlot.

setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.ReferencePointsVisualization

Registers the Reference-Point-CSS-Class at a SVGPlot.

setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TooltipScoreVisualization

Registers the Tooltip-CSS-Class at a SVGPlot.

setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TooltipStringVisualization

Registers the Tooltip-CSS-Class at a SVGPlot.

setupCSS(VisualizerContext, SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.CurveVisFactory

Setup the CSS classes for the plot.

setupCSSClasses(Object, CSSClassManager, StyleLibrary) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis

Register CSS classes with a CSSClassManager

setupHoverer() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot

Setup the CSS hover effect.

setValue(Bit) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.BitDistance

setValue(Double) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance

setValue(Float) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

setValue(Integer) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance

setValue(N) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance

Sets the value of this NumberDistance.

setValue(Object) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ColorfulRenderer

setValue(boolean) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag

Convenience function using a native boolean, that doesn't require error handling.

setValue(Object) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter

Sets the value of the option.

setValue(Object) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Sets the value of the option.

setValueAt(Object, int, int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel

setValueAt(Object, int, int) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow.DatabaseTableModel

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.AbstractParameterization

Perform the actual parameter assignment.

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ChainedParameterization

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.EmptyParameterization

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.MergedParameterization

setValueForOption(Parameter<?, ?>) - Method in interface de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization

Assign a value for an option, but not using default values and throwing exceptions on error.

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters

setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.UnParameterization

setValueInternal(T) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Internal setter for the value.

setVerbose(boolean) - Static method in class de.lmu.ifi.dbs.elki.logging.LoggingConfiguration

Reconfigure logging to enable 'verbose' logging at the top level.

setVisualizationVisibility(VisualizationTask, boolean) - Method in class de.lmu.ifi.dbs.elki.visualization.VisualizerContext

Change a visualizers visibility.

setZero() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Reset the Vector to 0.

SharedNearestNeighborIndex<O> - Interface in de.lmu.ifi.dbs.elki.index.preprocessed.snn

Interface for an index providing nearest neighbor sets.

SharedNearestNeighborIndex.Factory<O,I extends SharedNearestNeighborIndex<O>> - Interface in de.lmu.ifi.dbs.elki.index.preprocessed.snn

Factory interface

SharedNearestNeighborJaccardDistanceFunction<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction

SharedNearestNeighborJaccardDistanceFunction computes the Jaccard coefficient, which is a proper distance metric.

SharedNearestNeighborJaccardDistanceFunction(SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.SharedNearestNeighborJaccardDistanceFunction

Constructor.

SharedNearestNeighborJaccardDistanceFunction.Instance<T> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction

Actual instance for a dataset.

SharedNearestNeighborJaccardDistanceFunction.Instance(Relation<T>, SharedNearestNeighborIndex<T>, SharedNearestNeighborJaccardDistanceFunction<T>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.SharedNearestNeighborJaccardDistanceFunction.Instance

Constructor.

SharedNearestNeighborJaccardDistanceFunction.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction

Parameterization class.

SharedNearestNeighborJaccardDistanceFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.SharedNearestNeighborJaccardDistanceFunction.Parameterizer

SharedNearestNeighborPreprocessor<O,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.snn

A preprocessor for annotation of the ids of nearest neighbors to each database object.

SharedNearestNeighborPreprocessor(Relation<O>, int, DistanceFunction<O, D>) - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor

Constructor.

SharedNearestNeighborPreprocessor.Factory<O,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.snn

Factory class

SharedNearestNeighborPreprocessor.Factory(int, DistanceFunction<O, D>) - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor.Factory

Constructor.

SharedNearestNeighborPreprocessor.Factory.Parameterizer<O,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.snn

Parameterization class.

SharedNearestNeighborPreprocessor.Factory.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor.Factory.Parameterizer

SharedNearestNeighborSimilarityFunction<O> - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction

SharedNearestNeighborSimilarityFunction with a pattern defined to accept Strings that define a non-negative Integer.

SharedNearestNeighborSimilarityFunction(SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction

Constructor.

SharedNearestNeighborSimilarityFunction.Instance<O> - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction

Instance for a particular database.

SharedNearestNeighborSimilarityFunction.Instance(Relation<O>, SharedNearestNeighborIndex<O>) - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction.Instance

Constructor.

SharedNearestNeighborSimilarityFunction.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction

Parameterization class.

SharedNearestNeighborSimilarityFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction.Parameterizer

shift - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling

Shift

SHORT_SERIALIZER - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Static instance.

shortDescription - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

The short description of the option.

shortname - Variable in class de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation

The relation name (short version)

shortname - Variable in class de.lmu.ifi.dbs.elki.result.BasicResult

Result name, for output

shortValue(int) - Method in class de.lmu.ifi.dbs.elki.data.AbstractNumberVector

shortValue(int) - Method in interface de.lmu.ifi.dbs.elki.data.NumberVector

Returns the value in the specified dimension as short.

shortValue() - Method in class de.lmu.ifi.dbs.elki.data.RationalNumber

Returns the short value of this.doubleValue().

shortValue() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance

Get the value as short.

show(JPanel) - Method in class de.lmu.ifi.dbs.elki.gui.configurator.ClassListParameterConfigurator.SuperPopup

Show the menu on a particular panel.

show(JPanel) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ClassListEditor.SuperPopup

Show the menu on a particular panel.

showError(Component, String, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog

Helper method to show a error message as "popup".

showOverview() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Navigate to the overview plot.

showPlot(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Navigate to a particular plot.

showSaveDialog(SVGPlot, int, int) - Static method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog

Show a "Save as" dialog.

showSubplot(DetailViewSelectedEvent) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Navigate to a subplot.

showTableView() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Show a tabular view

shrinkHeap(TreeSet<FCPair<Double, DBID>>, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses

ShuffleObjectsFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter

A filter to shuffle the dataset.

ShuffleObjectsFilter(Long) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.ShuffleObjectsFilter

Constructor.

ShuffleObjectsFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parameterization class.

ShuffleObjectsFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.ShuffleObjectsFilter.Parameterizer

shutdown - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailThread

Flag to signal shutdown.

SHUTDOWN() - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailThread

Shutdown the thumbnailer thread.

shutdown() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailThread

Set the shutdown flag.

sigma - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MixtureModelOutlierScalingFunction

Parameter sigma of the gaussian distribution (outliers)

sigma - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.EMClusterVisualization

SigmoidOutlierScalingFunction - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Tries to fit a sigmoid to the outlier scores and use it to convert the values to probability estimates in the range of 0.0 to 1.0

SigmoidOutlierScalingFunction() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SigmoidOutlierScalingFunction

SignificantEigenPairFilter - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca

The SignificantEigenPairFilter sorts the eigenpairs in descending order of their eigenvalues and chooses the contrast of an Eigenvalue to the remaining Eigenvalues is maximal.

SignificantEigenPairFilter(double) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.SignificantEigenPairFilter

Constructor.

SignificantEigenPairFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca

Parameterization class.

SignificantEigenPairFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.SignificantEigenPairFilter.Parameterizer

similarity(DBID, DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.distance.PrimitiveDistanceSimilarityQuery

similarity(O, DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.distance.PrimitiveDistanceSimilarityQuery

similarity(DBID, O) - Method in class de.lmu.ifi.dbs.elki.database.query.distance.PrimitiveDistanceSimilarityQuery

similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.database.query.distance.PrimitiveDistanceSimilarityQuery

similarity(O, DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.AbstractDBIDSimilarityQuery

similarity(DBID, O) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.AbstractDBIDSimilarityQuery

similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.AbstractDBIDSimilarityQuery

similarity(DBID, DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.AbstractSimilarityQuery

Returns the distance between the two objects specified by their object ids.

similarity(O, DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.AbstractSimilarityQuery

Returns the distance between the two objects specified by their object ids.

similarity(DBID, O) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.AbstractSimilarityQuery

Returns the distance between the two objects specified by their object ids.

similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.AbstractSimilarityQuery

Returns the distance between the two objects specified by their object ids.

similarity(DBID, DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.PrimitiveSimilarityQuery

similarity(O, DBID) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.PrimitiveSimilarityQuery

similarity(DBID, O) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.PrimitiveSimilarityQuery

similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.database.query.similarity.PrimitiveSimilarityQuery

similarity(DBID, DBID) - Method in interface de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery

Returns the similarity between the two objects specified by their object ids.

similarity(O, DBID) - Method in interface de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery

Returns the similarity between the two objects specified by their object ids.

similarity(DBID, O) - Method in interface de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery

Returns the similarity between the two objects specified by their object ids.

similarity(O, O) - Method in interface de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery

Returns the similarity between the two objects specified by their object ids.

similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.AbstractPrimitiveSimilarityFunction

similarity(DBID, DBID) - Method in interface de.lmu.ifi.dbs.elki.distance.similarityfunction.DBIDSimilarityFunction

Computes the similarity between two given DatabaseObjects according to this similarity function.

similarity(DBID, DBID) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction.Instance

similarity(NumberVector<?, ?>, NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction

Provides an experimental kernel similarity between the given two vectors.

similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.LinearKernelFunction

Provides a linear Kernel function that computes a similarity between the two feature vectors V1 and V2 definded by V1^T*V2

similarity(NumberVector<?, ?>, NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.PolynomialKernelFunction

Provides the linear kernel similarity between the given two vectors.

similarity(O, O) - Method in interface de.lmu.ifi.dbs.elki.distance.similarityfunction.PrimitiveSimilarityFunction

Computes the similarity between two given DatabaseObjects according to this similarity function.

similarity(DBID, DBID) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction.Instance

SIMILARITY_FUNCTION_ID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.AbstractSimilarityAdapter

Parameter to specify the similarity function to derive the distance between database objects from.

SimilarityAdapterArccos<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Adapter from a normalized similarity function to a distance function using arccos(sim).

SimilarityAdapterArccos(NormalizedSimilarityFunction<? super O, ? extends NumberDistance<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterArccos

Constructor.

SimilarityAdapterArccos.Instance<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Distance function instance

SimilarityAdapterArccos.Instance(Relation<O>, DistanceFunction<? super O, DoubleDistance>, SimilarityQuery<O, ? extends NumberDistance<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterArccos.Instance

Constructor.

SimilarityAdapterArccos.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Parameterization class.

SimilarityAdapterArccos.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterArccos.Parameterizer

SimilarityAdapterLinear<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Adapter from a normalized similarity function to a distance function using 1 - sim.

SimilarityAdapterLinear(NormalizedSimilarityFunction<? super O, ? extends NumberDistance<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLinear

Constructor.

SimilarityAdapterLinear.Instance<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Distance function instance

SimilarityAdapterLinear.Instance(Relation<O>, DistanceFunction<? super O, DoubleDistance>, SimilarityQuery<? super O, ? extends NumberDistance<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLinear.Instance

Constructor.

SimilarityAdapterLinear.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Parameterization class.

SimilarityAdapterLinear.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLinear.Parameterizer

SimilarityAdapterLn<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Adapter from a normalized similarity function to a distance function using -log(sim).

SimilarityAdapterLn(NormalizedSimilarityFunction<? super O, ? extends NumberDistance<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLn

Constructor.

SimilarityAdapterLn.Instance<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Distance function instance

SimilarityAdapterLn.Instance(Relation<O>, DistanceFunction<? super O, DoubleDistance>, SimilarityQuery<O, ? extends NumberDistance<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLn.Instance

Constructor.

SimilarityAdapterLn.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter

Parameterization class.

SimilarityAdapterLn.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLn.Parameterizer

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering.Parameterizer

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering

The similarity function for the shared nearest neighbor similarity.

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.Parameterizer

The similarity function.

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD

The similarity function.

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.database.query.distance.PrimitiveDistanceSimilarityQuery

Typed reference to the similarity function (usually the same as the distance function!)

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.database.query.similarity.PrimitiveSimilarityQuery

The distance function we use.

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.AbstractSimilarityAdapter.Parameterizer

Holds the similarity function.

similarityFunction - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.AbstractSimilarityAdapter

Holds the similarity function.

SimilarityFunction<O,D extends Distance<?>> - Interface in de.lmu.ifi.dbs.elki.distance.similarityfunction

Interface SimilarityFunction describes the requirements of any similarity function.

similarityMat - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.SubspaceProjectionResult

The similarity matrix

similarityMatrix - Variable in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

The similarity matrix of the pca.

similarityMatrix() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns a copy of the similarity matrix (M_hat) of this LocalPCA.

similarityMatrix() - Method in interface de.lmu.ifi.dbs.elki.math.linearalgebra.ProjectionResult

Projection matrix

similarityMatrix() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SubspaceProjectionResult

SimilarityMatrixVisualizer - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj

Visualize a similarity matrix with object labels

SimilarityMatrixVisualizer(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.SimilarityMatrixVisualizer

Constructor.

SimilarityMatrixVisualizer.Factory - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj

Factory class for pixmap visualizers.

SimilarityMatrixVisualizer.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.SimilarityMatrixVisualizer.Factory

Constructor, adhering to Parameterizable

SimilarityQuery<O,D extends Distance<?>> - Interface in de.lmu.ifi.dbs.elki.database.query.similarity

A similarity query serves as adapter layer for database and primitive similarity functions.

similarityQuery - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.AbstractSimilarityAdapter.Instance

The similarity query we use.

Simple1D - Class in de.lmu.ifi.dbs.elki.visualization.projections

Dimension-selecting 1D projection.

Simple1D(LinearScale[], int) - Constructor for class de.lmu.ifi.dbs.elki.visualization.projections.Simple1D

Simple 1D projection using scaling only.

Simple2D - Class in de.lmu.ifi.dbs.elki.visualization.projections

Dimension-selecting 2D projection.

Simple2D(LinearScale[], int, int) - Constructor for class de.lmu.ifi.dbs.elki.visualization.projections.Simple2D

Constructor with a given database and axes.

SimpleClassLabel - Class in de.lmu.ifi.dbs.elki.data

A simple class label casting a String as it is as label.

SimpleClassLabel(String) - Constructor for class de.lmu.ifi.dbs.elki.data.SimpleClassLabel

Constructor.

SimpleClassLabel.Factory - Class in de.lmu.ifi.dbs.elki.data

Factory class

SimpleClassLabel.Factory() - Constructor for class de.lmu.ifi.dbs.elki.data.SimpleClassLabel.Factory

SimpleDBIDFactory - Class in de.lmu.ifi.dbs.elki.database.ids.integer

Simple DBID management, that never reuses IDs.

SimpleDBIDFactory() - Constructor for class de.lmu.ifi.dbs.elki.database.ids.integer.SimpleDBIDFactory

Constructor

SimpleEnumeratingScheme - Class in de.lmu.ifi.dbs.elki.result.textwriter.naming

Simple enumerating naming scheme.

SimpleEnumeratingScheme(Clustering<?>) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.naming.SimpleEnumeratingScheme

Constructor.

SimplePolygonParser - Class in de.lmu.ifi.dbs.elki.datasource.parser

Parser to load polygon data (2D and 3D only) from a simple format.

SimplePolygonParser(Pattern, char) - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.SimplePolygonParser

Constructor.

SimplePolygonParser.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.parser

Parameterization class.

SimplePolygonParser.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.SimplePolygonParser.Parameterizer

SimpleSVGViewer - Class in de.lmu.ifi.dbs.elki.visualization.gui

A minimalistic SVG viewer with export dialog.

SimpleSVGViewer() - Constructor for class de.lmu.ifi.dbs.elki.visualization.gui.SimpleSVGViewer

Constructor.

SimpleTypeInformation<T> - Class in de.lmu.ifi.dbs.elki.data.type

Class wrapping a particular data type.

SimpleTypeInformation(Class<? super T>) - Constructor for class de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation

Constructor.

SimpleTypeInformation(Class<? super T>, String) - Constructor for class de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation

Constructor.

simulateParameters(double[]) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod

Compute new chisquared error This function also modifies the alpha and beta matrixes!

singleAssignment(Relation<?>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelClustering

Assigns the objects of the database to single clusters according to their labels.

singleIteration(Relation<V>, Relation<? extends NumberVector<?, ?>>) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuGLSBackwardSearchAlgorithm

Run a single iteration of the GLS-SOD modeling step

SingleObjectBundle - Class in de.lmu.ifi.dbs.elki.datasource.bundle

This class represents a "packaged" object, which is a transfer container for objects e.g. from parsers to a database.

SingleObjectBundle() - Constructor for class de.lmu.ifi.dbs.elki.datasource.bundle.SingleObjectBundle

Constructor.

SingleObjectBundle(BundleMeta, List<Object>) - Constructor for class de.lmu.ifi.dbs.elki.datasource.bundle.SingleObjectBundle

Constructor.

SingleStreamOutput - Class in de.lmu.ifi.dbs.elki.result.textwriter

Class to output all result data to a single stream (e.g.

SingleStreamOutput() - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor using stdout.

SingleStreamOutput(boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor using stdout

SingleStreamOutput(File) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor with given file name.

SingleStreamOutput(File, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor with given file name.

SingleStreamOutput(FileDescriptor) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor with given FileDescriptor

SingleStreamOutput(FileDescriptor, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor with given FileDescriptor

SingleStreamOutput(FileOutputStream) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor with given FileOutputStream.

SingleStreamOutput(FileOutputStream, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Constructor with given FileOutputStream.

SINGULARITY_CHEAT - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.EM

Small value to increment diagonally of a matrix in order to avoid singularity before building the inverse.

SINGULARITY_CHEAT - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianModel

Small value to increment diagonally of a matrix in order to avoid singularity before building the inverse.

SINGULARITY_CHEAT - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianUniformMixture

Small value to increment diagonally of a matrix in order to avoid singularity before building the inverse.

SingularValueDecomposition - Class in de.lmu.ifi.dbs.elki.math.linearalgebra

Singular Value Decomposition.

SingularValueDecomposition(Matrix) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition

Construct the singular value decomposition

sinusProduct(int, int, double[]) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH

Computes the product of all sinus values of the specified angles from start to end index.

sinusProduct(int, int, double[]) - Method in class de.lmu.ifi.dbs.elki.data.ParameterizationFunction

Computes the product of all sinus values of the specified angles from start to end index.

size() - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult

size() - Method in class de.lmu.ifi.dbs.elki.data.Cluster

Delegate to database object group.

size() - Method in class de.lmu.ifi.dbs.elki.data.model.Bicluster

The size of the cluster.

size() - Method in class de.lmu.ifi.dbs.elki.data.spatial.Polygon

Get the polygon length.

size - Variable in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Number of points in the cluster (-> density)

size() - Method in interface de.lmu.ifi.dbs.elki.database.Database

Deprecated.

size() - Method in class de.lmu.ifi.dbs.elki.database.HashmapDatabase

Deprecated.

size() - Method in interface de.lmu.ifi.dbs.elki.database.ids.DBIDs

Retrieve the collection / data size.

size() - Method in class de.lmu.ifi.dbs.elki.database.ids.EmptyDBIDs

size() - Method in class de.lmu.ifi.dbs.elki.database.ids.generic.MaskedDBIDs

size() - Method in class de.lmu.ifi.dbs.elki.database.ids.generic.MergedDBIDs

size() - Method in class de.lmu.ifi.dbs.elki.database.ids.generic.UnmodifiableDBIDs

size() - Method in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerArrayStaticDBIDs

size() - Method in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBID

size() - Method in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBIDRange

size() - Method in class de.lmu.ifi.dbs.elki.database.ProxyDatabase

Deprecated.

size() - Method in class de.lmu.ifi.dbs.elki.database.relation.ConvertToStringView

size() - Method in class de.lmu.ifi.dbs.elki.database.relation.DBIDView

size() - Method in class de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation

size() - Method in class de.lmu.ifi.dbs.elki.database.relation.ProxyView

size() - Method in interface de.lmu.ifi.dbs.elki.database.relation.Relation

Get the number of DBIDs.

size() - Method in class de.lmu.ifi.dbs.elki.database.StaticArrayDatabase

Deprecated.

size - Variable in class de.lmu.ifi.dbs.elki.datasource.RandomDoubleVectorDatabaseConnection.Parameterizer

size - Variable in class de.lmu.ifi.dbs.elki.datasource.RandomDoubleVectorDatabaseConnection

Size of database to generate

size() - Method in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters

Get the size

size() - Method in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile

Return number of saved settings profiles.

SIZE - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.MkTreeHeader

The size of this header in Bytes, which is 4 Bytes (for MkTreeHeader.k_max).

size() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.MkTreeHeader

Returns TreeIndexHeader.size() plus the value of MkTreeHeader.SIZE).

SIZE - Static variable in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

The size of this header in Bytes, which is 20 Bytes ( 4 Bytes for TreeIndexHeader.dirCapacity, TreeIndexHeader.leafCapacity, TreeIndexHeader.dirMinimum, TreeIndexHeader.leafMinimum, and TreeIndexHeader.emptyPagesSize).

size() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

Returns DefaultPageHeader.size() plus the value of TreeIndexHeader.SIZE).

size() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs

Returns the number of the eigenpairs.

size - Variable in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Size of array storage.

SIZE - Static variable in class de.lmu.ifi.dbs.elki.persistent.DefaultPageHeader

The size of this header in Bytes, which is 8 Bytes ( 4 Bytes for DefaultPageHeader.FILE_VERSION and 4 Bytes for DefaultPageHeader.pageSize).

size() - Method in class de.lmu.ifi.dbs.elki.persistent.DefaultPageHeader

Returns the value of DefaultPageHeader.SIZE).

size() - Method in interface de.lmu.ifi.dbs.elki.persistent.PageHeader

Returns the size of this header in Bytes.

size() - Method in class de.lmu.ifi.dbs.elki.result.CollectionResult

Get the collection size.

size() - Method in class de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult.PredecessorAdapter

size() - Method in class de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult.ReachabilityDistanceAdapter

size() - Method in class de.lmu.ifi.dbs.elki.utilities.DatabaseUtil.CollectionFromRelation

size - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.Heap

Current number of objects

size() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.Heap

size() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.KNNList.DBIDView

size() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.KNNList.DistanceView

size() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.TiedTopBoundedHeap

size - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalVectorListElementSizeConstraint

Integer parameter providing the size constraint.

size() - Method in class de.lmu.ifi.dbs.elki.utilities.Util.MaskedArrayList

SIZE_BYTE - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Size of a byte in bytes.

SIZE_DOUBLE - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Size of a double in bytes.

SIZE_FLOAT - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Size of a float in bytes.

SIZE_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.RandomDoubleVectorDatabaseConnection.Parameterizer

Parameter to specify the database size to generate.

SIZE_INT - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Size of an integer in bytes.

SIZE_LONG - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Size of a long in bytes.

SIZE_SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.GeneratorXMLDatabaseConnection

Parameter to give the configuration file

SIZE_SHORT - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Size of a short in bytes.

sizeConstraint - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ListSizeConstraint

The list size constraint.

sizePanel - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

If saving as JPEG/PNG show width/height infos here.

sizescale - Variable in class de.lmu.ifi.dbs.elki.datasource.GeneratorXMLDatabaseConnection.Parameterizer

Parameter for scaling the cluster sizes.

sizescale - Variable in class de.lmu.ifi.dbs.elki.datasource.GeneratorXMLDatabaseConnection

Parameter for scaling the cluster sizes.

skippackages - Variable in class de.lmu.ifi.dbs.elki.application.internal.CheckELKIProperties

Package to skip matches in - unreleased code.

skipzero - Variable in class de.lmu.ifi.dbs.elki.evaluation.similaritymatrix.ComputeSimilarityMatrixImage.Parameterizer

Skip zero values.

skipzero - Variable in class de.lmu.ifi.dbs.elki.evaluation.similaritymatrix.ComputeSimilarityMatrixImage

Skip zero values.

SKIPZERO_ID - Static variable in class de.lmu.ifi.dbs.elki.evaluation.similaritymatrix.ComputeSimilarityMatrixImage

OptionID to skip zero values when plotting to increase contrast.

SLINK<O,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Efficient implementation of the Single-Link Algorithm SLINK of R.

SLINK(DistanceFunction<? super O, D>, Integer) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK

Constructor.

SLINK.CompareByLambda<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Order a DBID collection by the lambda value.

SLINK.CompareByLambda(DataStore<D>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK.CompareByLambda

Constructor.

SLINK.Parameterizer<O,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Parameterization class.

SLINK.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK.Parameterizer

SLINK_MINCLUSTERS_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK

The minimum number of clusters to extract

SLOM<N,O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial

SLOM: a new measure for local spatial outliers Reference:
Sanjay Chawla and Pei Sun
SLOM: a new measure for local spatial outliers
in Knowledge and Information Systems 2005 This implementation works around some corner cases in SLOM, in particular when an object has none or a single neighbor only (albeit the results will still not be too useful then), which will result in divisions by zero.

SLOM(NeighborSetPredicate.Factory<N>, PrimitiveDistanceFunction<O, D>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SLOM

Constructor.

SLOM.Parameterizer<N,O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial

Parameterization class.

SLOM.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SLOM.Parameterizer

small - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod

"Small value" condition for stopping

small - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner.Parameterizer

Holds the value of PCAFilteredRunner.SMALL_ID.

small - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner

Holds the value of PCAFilteredRunner.SMALL_ID.

SMALL - Static variable in class de.lmu.ifi.dbs.elki.math.statistics.QuickSelect

For small arrays, use a simpler method:

SMALL_ID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner

Parameter to specify a constant small value to reset low eigenvalues, must be a double greater than 0.

smoothCubicTo(double, double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath

Smooth Cubic Bezier line to the given coordinates.

smoothCubicTo(Vector, Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath

Smooth Cubic Bezier line to the given coordinates.

smoothQuadTo(double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath

Smooth quadratic Bezier line to the given coordinates.

smoothQuadTo(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath

Smooth quadratic Bezier line to the given coordinates.

SNNClustering<O> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Shared nearest neighbor clustering.

SNNClustering(SharedNearestNeighborSimilarityFunction<O>, IntegerDistance, int) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering

Constructor.

SNNClustering.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Parameterization class.

SNNClustering.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering.Parameterizer

SOD<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

SOD(int, double, SharedNearestNeighborSimilarityFunction<V>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD

Constructor with parameters.

sod - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODModel

SOD.Parameterizer<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Parameterization class.

SOD.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.Parameterizer

SOD.SODModel<O extends NumberVector<O,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

SOD.SODModel(Relation<O>, DBIDs, double, O) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODModel

Initialize SOD Model

SOD.SODProxyScoreResult - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Proxy class that converts a model result to an actual SOD score result.

SOD.SODProxyScoreResult(Relation<SOD.SODModel<?>>, DBIDs) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult

Constructor.

SOF<N,O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial

The Spatial Outlier Factor (SOF) is a spatial LOF variation.

SOF(NeighborSetPredicate.Factory<N>, PrimitiveDistanceFunction<O, D>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SOF

Constructor.

SOF.Parameterizer<N,O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial

Parameterization class

SOF.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SOF.Parameterizer

softBorder - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.EMClusterVisualization

SolidLineStyleLibrary - Class in de.lmu.ifi.dbs.elki.visualization.style.lines

Line style library featuring solid lines for default styles only (combine with a color library to obtain enough classes!)

SolidLineStyleLibrary(StyleLibrary) - Constructor for class de.lmu.ifi.dbs.elki.visualization.style.lines.SolidLineStyleLibrary

Constructor.

solidreplacement - Variable in class de.lmu.ifi.dbs.elki.visualization.style.lines.DashedLineStyleLibrary

Replacement for the solid pattern in 'interpolated' mode

solution - Variable in class de.lmu.ifi.dbs.elki.result.AprioriResult

The frequent itemsets.

solutionToString(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Returns a string representation of the solution of this equation system.

solvable - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Indicates if linear equation system is solvable.

solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.CholeskyDecomposition

Solve A*X = B

solve(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

solves linear system with the chosen method

solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition

Solve A*X = B

solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Solve A*X = B

solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.QRDecomposition

Least squares solution of A*X = B

solveByTotalPivotSearch() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Solves this linear equation system by total pivot search.

solveByTrivialPivotSearch() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Solves this linear equation system by trivial pivot search.

solved - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Indicates if solvability has been checked.

solveTranspose(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Solve X*A = B, which is also A'*X' = B'

sort(List<V>, Relation<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.KMeans

Returns a list of clusters.

sort() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem

Sort all visualizers for their proper drawing order

SortByLabelFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter

A filter to sort the data set by some label.

SortByLabelFilter() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.SortByLabelFilter

Constructor.

sortClusters(Relation<V>, Map<BitSet, List<Pair<BitSet, ArrayModifiableDBIDs>>>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH

Returns a sorted list of the clusters w.r.t. the subspace dimensionality in descending order.

SortedEigenPairs - Class in de.lmu.ifi.dbs.elki.math.linearalgebra

Helper class which encapsulates an array of eigenpairs (i.e. an array of eigenvectors and their corresponding eigenvalues).

SortedEigenPairs() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs

Creates a new empty SortedEigenPairs object.

SortedEigenPairs(EigenvalueDecomposition, boolean) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs

Creates a new SortedEigenPairs object from the specified eigenvalue decomposition.

SortedEigenPairs(List<EigenPair>) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs

Creates a new SortedEigenPairs object from the specified list.

sortedReferences() - Static method in class de.lmu.ifi.dbs.elki.application.internal.DocumentReferences

sortIDs() - Method in class de.lmu.ifi.dbs.elki.data.model.Bicluster

Sorts the row and column ids in ascending order.

sortIDs() - Method in class de.lmu.ifi.dbs.elki.data.model.BiclusterWithInverted

Sorts the row and column ids (and - if applicable - the ids of inverted rows) in ascending order.

sources - Variable in class de.lmu.ifi.dbs.elki.datasource.ExternalIDJoinDatabaseConnection.Parameterizer

The data souces to use.

sources - Variable in class de.lmu.ifi.dbs.elki.datasource.ExternalIDJoinDatabaseConnection

The filters to invoke

sources - Variable in class de.lmu.ifi.dbs.elki.datasource.LabelJoinDatabaseConnection.Parameterizer

The data souces to use.

sources - Variable in class de.lmu.ifi.dbs.elki.datasource.LabelJoinDatabaseConnection

The filters to invoke

SOURCES_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.ExternalIDJoinDatabaseConnection.Parameterizer

The static option ID

SOURCES_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.LabelJoinDatabaseConnection.Parameterizer

The static option ID

SPACE_SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints

Parameter to specify the extra scaling of the space, to allow out-of-data-space reference points.

spacescale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints.Parameterizer

Holds the value of AxisBasedReferencePoints.SPACE_SCALE_ID.

spacescale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints

Holds the value of AxisBasedReferencePoints.SPACE_SCALE_ID.

SPARSE_FLOAT_FIELD - Static variable in class de.lmu.ifi.dbs.elki.data.type.TypeUtil

Sparse float vector field.

SparseBitVectorLabelParser - Class in de.lmu.ifi.dbs.elki.datasource.parser

Provides a parser for parsing one sparse BitVector per line, where the indices of the one-bits are separated by whitespace.

SparseBitVectorLabelParser(Pattern, char) - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.SparseBitVectorLabelParser

Constructor.

SparseBitVectorLabelParser.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.parser

Parameterization class.

SparseBitVectorLabelParser.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.SparseBitVectorLabelParser.Parameterizer

SparseFeatureVector<V extends SparseFeatureVector<V,D>,D> - Interface in de.lmu.ifi.dbs.elki.data

Extended interface for sparse feature vector types

SparseFloatVector - Class in de.lmu.ifi.dbs.elki.data

A SparseFloatVector is to store real values approximately as float values.

SparseFloatVector(int[], float[], int) - Constructor for class de.lmu.ifi.dbs.elki.data.SparseFloatVector

Direct constructor.

SparseFloatVector(Map<Integer, Float>, int) - Constructor for class de.lmu.ifi.dbs.elki.data.SparseFloatVector

Provides a SparseFloatVector consisting of double values according to the specified mapping of indices and values.

SparseFloatVector(float[]) - Constructor for class de.lmu.ifi.dbs.elki.data.SparseFloatVector

Provides a SparseFloatVector consisting of double values according to the specified mapping of indices and values.

SparseFloatVectorLabelParser - Class in de.lmu.ifi.dbs.elki.datasource.parser

Provides a parser for parsing one point per line, attributes separated by whitespace.

SparseFloatVectorLabelParser(Pattern, char, BitSet) - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.SparseFloatVectorLabelParser

Constructor.

SparseFloatVectorLabelParser.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.parser

Parameterization class.

SparseFloatVectorLabelParser.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.SparseFloatVectorLabelParser.Parameterizer

SparseFloatVectorProjectionFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parser to project the ParsingResult obtained by a suitable base parser onto a selected subset of attributes.

SparseFloatVectorProjectionFilter(BitSet) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorProjectionFilter

Constructor.

SparseFloatVectorProjectionFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parameterization class.

SparseFloatVectorProjectionFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorProjectionFilter.Parameterizer

SparseFloatVectorRandomProjectionFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parser to project the ParsingResult obtained by a suitable base parser onto a randomly selected subset of attributes.

SparseFloatVectorRandomProjectionFilter(int) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorRandomProjectionFilter

Constructor.

SparseFloatVectorRandomProjectionFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parameterization class.

SparseFloatVectorRandomProjectionFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorRandomProjectionFilter.Parameterizer

SparseNumberVector<V extends SparseNumberVector<V,N>,N extends Number> - Interface in de.lmu.ifi.dbs.elki.data

Combines the SparseFeatureVector and NumberVector

sparsity(int, int, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.AbstractAggarwalYuOutlier

Method to calculate the sparsity coefficient of

SpatialApproximationMaterializeKNNPreprocessor<O extends NumberVector<?,?>,D extends Distance<D>,N extends SpatialNode<N,E>,E extends SpatialEntry> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.knn

A preprocessor for annotation of the k nearest neighbors (and their distances) to each database object.

SpatialApproximationMaterializeKNNPreprocessor(Relation<O>, DistanceFunction<? super O, D>, int) - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.knn.SpatialApproximationMaterializeKNNPreprocessor

Constructor

SpatialApproximationMaterializeKNNPreprocessor.Factory<D extends Distance<D>,N extends SpatialNode<N,E>,E extends SpatialEntry> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.knn

The actual preprocessor instance.

SpatialApproximationMaterializeKNNPreprocessor.Factory(int, DistanceFunction<? super NumberVector<?, ?>, D>) - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.knn.SpatialApproximationMaterializeKNNPreprocessor.Factory

Constructor.

SpatialApproximationMaterializeKNNPreprocessor.Factory.Parameterizer<D extends Distance<D>,N extends SpatialNode<N,E>,E extends SpatialEntry> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.knn

Parameterization class.

SpatialApproximationMaterializeKNNPreprocessor.Factory.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.knn.SpatialApproximationMaterializeKNNPreprocessor.Factory.Parameterizer

SpatialComparable - Interface in de.lmu.ifi.dbs.elki.data.spatial

Defines the required methods needed for comparison of spatial objects.

SpatialComparator - Class in de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util

Compares objects of type SpatialComparable.

SpatialComparator(int, int) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.SpatialComparator

Creates a new spatial comparator with the specified parameters.

SpatialDirectoryEntry - Class in de.lmu.ifi.dbs.elki.index.tree.spatial

Represents an entry in a directory node of a spatial index.

SpatialDirectoryEntry() - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

Empty constructor for serialization purposes.

SpatialDirectoryEntry(int, HyperBoundingBox) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

Constructs a new SpatialDirectoryEntry object with the given parameters.

SpatialDistanceQuery<V extends SpatialComparable,D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.database.query.distance

Query interface for spatial distance queries.

SpatialEntry - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial

Defines the requirements for an entry in a node of a Spatial Index.

SpatialIndexTree<N extends SpatialNode<N,E>,E extends SpatialEntry> - Class in de.lmu.ifi.dbs.elki.index.tree.spatial

Abstract super class for all spatial index tree classes.

SpatialIndexTree(PageFile<N>) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialIndexTree

Constructor.

SpatialNode<N extends SpatialNode<N,E>,E extends SpatialEntry> - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial

Defines the requirements for an object that can be used as a node in a Spatial Index.

SpatialPair<K,V extends SpatialComparable> - Class in de.lmu.ifi.dbs.elki.index.tree.spatial

Defines the requirements for objects that can be indexed by a Spatial Index, which are spatial nodes or data objects.

SpatialPair(K, V) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialPair

Constructor: bundle a key and a spatial comparable

SpatialPointLeafEntry - Class in de.lmu.ifi.dbs.elki.index.tree.spatial

Represents an entry in a leaf node of a spatial index.

SpatialPointLeafEntry() - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialPointLeafEntry

Empty constructor for serialization purposes.

SpatialPointLeafEntry(DBID, double[]) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialPointLeafEntry

Constructs a new LeafEntry object with the given parameters.

SpatialPointLeafEntry(DBID, NumberVector<?, ?>) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialPointLeafEntry

Constructor from number vector

SpatialPrimitiveDistanceFunction<V extends SpatialComparable,D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.distance.distancefunction

API for a spatial primitive distance function.

SpatialPrimitiveDistanceQuery<V extends SpatialComparable,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.database.query.distance

Distance query for spatial distance functions

SpatialPrimitiveDistanceQuery(Relation<? extends V>, SpatialPrimitiveDistanceFunction<? super V, D>) - Constructor for class de.lmu.ifi.dbs.elki.database.query.distance.SpatialPrimitiveDistanceQuery

SpatialPrimitiveDoubleDistanceFunction<V extends SpatialComparable> - Interface in de.lmu.ifi.dbs.elki.distance.distancefunction

Interface combining spatial primitive distance functions with primitive number distance functions.

SpatialUtil - Class in de.lmu.ifi.dbs.elki.data.spatial

Utility class with spatial functions.

SpatialUtil() - Constructor for class de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil

specfile - Variable in class de.lmu.ifi.dbs.elki.datasource.GeneratorXMLDatabaseConnection.Parameterizer

The configuration file.

specfile - Variable in class de.lmu.ifi.dbs.elki.datasource.GeneratorXMLDatabaseConnection

The configuration file.

spinner - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

spinnerHeight - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

spinnerQual - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

spinnerWidth - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

split - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

The object to perform interval splitting.

split() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Splits this interval into 2 children.

split(N) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree

Splits the specified node and returns the split result.

split - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree.SplitResult

split(N) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Splits the specified node and returns the newly created split node.

split(List<E>, int) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.SplitStrategy

Split a page

split(List<E>, int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.TopologicalSplitter

SPLIT - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ListParameter

A pattern defining a ",".

splitAtLastBlank(String, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Splits the specified string at the last blank before width.

splitAxis - Variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.TopologicalSplitter.Split

The split axis.

splitCol(int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.RectangleArranger

splitfreq - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram.Parameterizer

Flag to make split frequencies

splitfreq - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram

Flag to make split frequencies

SPLITFREQ_ID - Static variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram

Flag to count frequencies of outliers and non-outliers separately Key: -histogram.splitfreq

SplitNumberVectorFilter<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.datasource.filter

Split an existing column into two types.

SplitNumberVectorFilter(int[]) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.SplitNumberVectorFilter

Constructor.

SplitNumberVectorFilter.Parameterizer<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parameterization class.

SplitNumberVectorFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.SplitNumberVectorFilter.Parameterizer

splitPoint - Variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.TopologicalSplitter.Split

The index of the split point.

splitRow(int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.RectangleArranger

SplitStrategy<B> - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util

Generic interface for split strategies.

splitTo(AbstractNode<E>, List<E>, int) - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractNode

Redistribute entries according to the given sorting.

splitTo(AbstractNode<E>, List<E>, List<E>) - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractNode

Splits the entries of this node into a new node using the given assignments

SQRT2 - Static variable in class de.lmu.ifi.dbs.elki.math.MathUtil

Square root of 2.

SQRTHALF - Static variable in class de.lmu.ifi.dbs.elki.math.MathUtil

Square root of 0.5 == 1 / Sqrt(2)

SqrtStandardDeviationScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Scaling that can map arbitrary values to a probability in the range of [0:1].

SqrtStandardDeviationScaling(Double, Double, Double) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling

Constructor.

SqrtStandardDeviationScaling.Parameterizer - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Parameterization class.

SqrtStandardDeviationScaling.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling.Parameterizer

SQRTTWOPI - Static variable in class de.lmu.ifi.dbs.elki.math.MathUtil

Squre root of two times Pi.

sqrtVector() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Square roots every element of the vector.

SquaredEuclideanDistanceFunction - Class in de.lmu.ifi.dbs.elki.distance.distancefunction

Provides the squared Euclidean distance for FeatureVectors.

SquaredEuclideanDistanceFunction() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction

Deprecated. Use static instance!

SquaredEuclideanDistanceFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.distance.distancefunction

Parameterization class.

SquaredEuclideanDistanceFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction.Parameterizer

SquaredPearsonCorrelationDistanceFunction - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.correlation

Squared Pearson correlation distance function for feature vectors.

SquaredPearsonCorrelationDistanceFunction() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction

Deprecated. use static instance!

SquaredPearsonCorrelationDistanceFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.correlation

Parameterization class.

SquaredPearsonCorrelationDistanceFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction.Parameterizer

srcColorModel - Variable in class de.lmu.ifi.dbs.elki.data.images.BlendComposite.BlendingContext

Source color model

ssqerr(int, int, double[], double[], double, double) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTree

ssr - Variable in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression

The sum of square residuals

sst - Variable in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression

The sum of square totals

stack - Variable in class de.lmu.ifi.dbs.elki.application.jsmap.JSONBuffer

Operations stack for detecting errors

StandardCovarianceMatrixBuilder<V extends NumberVector<? extends V,?>> - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca

Class for building a "traditional" covariance matrix.

StandardCovarianceMatrixBuilder() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.StandardCovarianceMatrixBuilder

standardDeviation - Variable in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

The standard deviation within this solution.

StandardDeviationScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Scaling that can map arbitrary values to a probability in the range of [0:1].

StandardDeviationScaling(Double, Double) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling

Constructor.

StandardDeviationScaling() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling

Constructor.

StandardDeviationScaling.Parameterizer - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Parameterization class.

StandardDeviationScaling.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling.Parameterizer

standardNormalProbit(double) - Static method in class de.lmu.ifi.dbs.elki.math.MathUtil

Approximate the inverse error function for normal distributions.

StarBasedReferencePoints<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.utilities.referencepoints

Star-based strategy to pick reference points.

StarBasedReferencePoints(boolean, double) - Constructor for class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints

Constructor.

StarBasedReferencePoints.Parameterizer<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.utilities.referencepoints

Parameterization class.

StarBasedReferencePoints.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints.Parameterizer

start - Variable in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBIDRange

Start value

start - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy.HierarchyHashmapList.ItrAnc

Starting object (for cloning);

start - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy.HierarchyHashmapList.ItrDesc

Starting object (for cloning);

START_TRACE_AT - Static variable in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord

Name of this class.

startArray() - Method in class de.lmu.ifi.dbs.elki.application.jsmap.JSONBuffer

Start an array context.

startDrag(SVGPoint, Event) - Method in interface de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea.DragListener

Action to do on drag start.

startDrag(SVGPoint, Event) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea

Action to do on drag start.

startDrag(SVGPoint, Event) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotCutVisualization

startDrag(SVGPoint, Event) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotSelectionVisualization

startDrag(SVGPoint, Event) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.MoveObjectsToolVisualization

startDrag(SVGPoint, Event) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolCubeVisualization

startDrag(SVGPoint, Event) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolDotVisualization

startDragPoint - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea

The point where the drag started.

startHash() - Method in class de.lmu.ifi.dbs.elki.application.jsmap.JSONBuffer

Start an hash context.

startid - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.FixedDBIDsFilter.Parameterizer

startid - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.FixedDBIDsFilter

The first ID to assign

startindex - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepArea

Start index of down-area

startIndex - Variable in class de.lmu.ifi.dbs.elki.data.model.OPTICSModel

Start index

startTask() - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Do a full run of the KDDTask with the specified parameters.

state - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer

Parameterization state.

STATE_COMPLETE - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer

Constant for "complete" state

STATE_ERRORS - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer

Constant for "errors" state

STATE_FRESH - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer

Constant for "fresh" state

STATE_INIT - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer

Constant for "initializing" state

stateChanged(ChangeEvent) - Method in class de.lmu.ifi.dbs.elki.gui.configurator.ClassListParameterConfigurator

stateChanged(ChangeEvent) - Method in class de.lmu.ifi.dbs.elki.gui.configurator.ClassParameterConfigurator

stateChanged(ChangeEvent) - Method in class de.lmu.ifi.dbs.elki.gui.configurator.ConfiguratorPanel

stateChanged(ChangeEvent) - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

statements - Variable in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Actual CSS statements

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.ArcCosineDistanceFunction

Static instance

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HistogramIntersectionDistanceFunction

Static instance

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PearsonCorrelationDistanceFunction

Static instance.

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction

Static instance.

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction

Static instance

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction

Static instance.

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LatLngDistanceFunction

Static instance

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LngLatDistanceFunction

Static instance

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction

The static instance to use.

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction

Static instance.

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction

Static instance.

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.RandomStableDistanceFunction

Static instance

STATIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction

Static instance.

STATIC() - Static method in class de.lmu.ifi.dbs.elki.utilities.iterator.EmptyIterator

Access the static instance.

STATIC_INSTANCE - Static variable in class de.lmu.ifi.dbs.elki.utilities.iterator.EmptyIterator

Static instance

STATIC_LOGGER - Static variable in class de.lmu.ifi.dbs.elki.application.AbstractApplication

We need a static logger in this class, for code used in "main" methods.

StaticArrayDatabase - Class in de.lmu.ifi.dbs.elki.database

This database class uses array-based storage and thus does not allow for dynamic insert, delete and update operations.

StaticArrayDatabase(DatabaseConnection, Collection<IndexFactory<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.database.StaticArrayDatabase

Constructor.

StaticArrayDatabase() - Constructor for class de.lmu.ifi.dbs.elki.database.StaticArrayDatabase

Constructor with no indexes.

StaticArrayDatabase.Parameterizer - Class in de.lmu.ifi.dbs.elki.database

Parameterization class.

StaticArrayDatabase.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.database.StaticArrayDatabase.Parameterizer

StaticDBIDs - Interface in de.lmu.ifi.dbs.elki.database.ids

Unmodifiable DBIDs.

staticids - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

StaticScalingFunction - Interface in de.lmu.ifi.dbs.elki.utilities.scaling

Interface for Scaling functions that do NOT depend on analyzing the data set.

staticSerializer - Static variable in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBID

The public instance to use for static serialization.

StaticVisualization - Class in de.lmu.ifi.dbs.elki.visualization.visualizers

Static visualization

StaticVisualization(VisualizationTask, Element) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.StaticVisualization

Unchanging precomputed visualization.

STATUS_COMPLETE - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Status to signal the step has been run completely.

STATUS_CONFIGURED - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Status to signal the step has been configured properly.

STATUS_FAILED - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Status to signal the step has failed somehow

STATUS_READY - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Status to signal the step is ready to run

STATUS_UNCONFIGURED - Static variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Status to signal the step has been configured properly.

statusText - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

The status text field

stddev - Variable in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.NormalDistribution

Standard deviation

stddev - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.AttributeWiseVarianceNormalization.Parameterizer

Stores the standard deviation in each dimension.

stddev - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.AttributeWiseVarianceNormalization

Stores the standard deviation in each dimension.

stddev - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.HeDESNormalizationOutlierScaling

Standard deviation

STDDEV_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.filter.AttributeWiseVarianceNormalization

Parameter for stddevs.

steepDown(double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepScanPosition

Test for a steep down area.

steepUp(double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepScanPosition

Test for a steep up point.

step1(DBID) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK

First step: Initialize P(id) = id, L(id) = infinity.

step2(DBID, DBIDs, DistanceQuery<O, D>, WritableDataStore<D>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK

Second step: Determine the pairwise distances from all objects in the pointer representation to the new object with the specified id.

step3(DBID, DBIDs, WritableDataStore<D>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK

Third step: Determine the values for P and L

step4(DBID, DBIDs) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK

Fourth step: Actualize the clusters if necessary

StepProgress - Class in de.lmu.ifi.dbs.elki.logging.progress

This progress class is used for multi-step processing.

StepProgress(int) - Constructor for class de.lmu.ifi.dbs.elki.logging.progress.StepProgress

Constructor.

StepProgress(String, int) - Constructor for class de.lmu.ifi.dbs.elki.logging.progress.StepProgress

Constructor.

steps - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.ExtendedNeighborhood.Factory.Parameterizer

The number of steps to do.

steps - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.ExtendedNeighborhood.Factory

Number of steps to do

steps - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.LinearWeightedExtendedNeighborhood.Factory.Parameterizer

The number of steps to do.

steps - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.LinearWeightedExtendedNeighborhood.Factory

Number of steps to do

steps - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.LinearWeightedExtendedNeighborhood

The number of steps to extend to.

STEPS_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.ExtendedNeighborhood.Factory.Parameterizer

Parameter to specify the number of steps allowed

STEPS_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.LinearWeightedExtendedNeighborhood.Factory.Parameterizer

Parameter to specify the number of steps allowed

stepTitle - Variable in class de.lmu.ifi.dbs.elki.logging.progress.StepProgress

Title of the current step.

StockIcon - Class in de.lmu.ifi.dbs.elki.gui.icons

Stock icon library for use in the GUI.

StockIcon() - Constructor for class de.lmu.ifi.dbs.elki.gui.icons.StockIcon

stop() - Method in class de.lmu.ifi.dbs.elki.application.jsmap.JSONWebServer

Stop the web server.

storage - Variable in class de.lmu.ifi.dbs.elki.index.preprocessed.AbstractPreprocessorIndex

The data store

store - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.AbstractPrecomputedNeighborhood

The data

store - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

Settings storage

store - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Settings storage

store - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel.SettingsComboboxModel

Settings storage

store - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel

The settings file to display.

store - Variable in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile

Data store

store - Variable in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager

Store the contained CSS classes.

STR_CHOOSE_FORMAT - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

STR_IMAGE_HEIGHT - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

STR_IMAGE_SIZE - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

STR_IMAGE_WIDTH - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

STR_JPEG_QUALITY - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

STR_LOCK_ASPECT_RATIO - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

STR_RESET_IMAGE_SIZE - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

strategy - Variable in class de.lmu.ifi.dbs.elki.index.preprocessed.preference.DiSHPreferenceVectorIndex.Factory.Parameterizer

The strategy to determine the preference vector.

strategy - Variable in class de.lmu.ifi.dbs.elki.index.preprocessed.preference.DiSHPreferenceVectorIndex.Factory

The strategy to determine the preference vector.

strategy - Variable in class de.lmu.ifi.dbs.elki.index.preprocessed.preference.DiSHPreferenceVectorIndex

The strategy to determine the preference vector.

STRATEGY_ID - Static variable in class de.lmu.ifi.dbs.elki.index.preprocessed.preference.DiSHPreferenceVectorIndex.Factory

The strategy for determination of the preference vector, available strategies are: DiSHPreferenceVectorIndex.Strategy.APRIORI and DiSHPreferenceVectorIndex.Strategy.MAX_INTERSECTION.

stream - Variable in class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Output stream

StreamFactory - Interface in de.lmu.ifi.dbs.elki.result.textwriter

Interface for output handling (single file, multiple files, ...)

STRING - Static variable in class de.lmu.ifi.dbs.elki.data.type.TypeUtil

A string

STRING_OPTIONAL - Static variable in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters

Pseudo-value used in options that are optional, to unset.

STRING_SERIALIZER - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Static instance.

STRING_USE_DEFAULT - Static variable in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters

Pseudo-value used in dropdowns for options that have a default value

StringLengthConstraint - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Length constraint for a StringParameter .

StringLengthConstraint(int, int) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.StringLengthConstraint

Constructor with minimum and maximum length.

StringParameter - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Parameter class for a parameter specifying a string.

StringParameter(OptionID, List<ParameterConstraint<String>>, String) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID, constraints and default value.

StringParameter(OptionID, List<ParameterConstraint<String>>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID, constraints and default value.

StringParameter(OptionID, List<ParameterConstraint<String>>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID, constraints and default value.

StringParameter(OptionID, ParameterConstraint<String>, String) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID, constraints and default value.

StringParameter(OptionID, ParameterConstraint<String>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID, constraints and default value.

StringParameter(OptionID, ParameterConstraint<String>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID, constraints and default value.

StringParameter(OptionID, String) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID, and default value.

StringParameter(OptionID, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID.

StringParameter(OptionID) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Constructs a string parameter with the given optionID.

stringToColor(String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Convert a color name from SVG syntax to an AWT color object.

stringToDBID(String) - Method in class de.lmu.ifi.dbs.elki.application.jsmap.JSONWebServer

Parse a string into a DBID.

strip - Variable in class de.lmu.ifi.dbs.elki.application.internal.CheckELKIProperties

Pattern to strip comments, while keeping commented class names.

strongEigenPairs - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FilteredEigenPairs

The strong eigenpairs.

strongEigenvalues - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

The strong eigenvalues.

strongEigenvectors - Variable in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

The strong eigenvectors of the hyperplane induced by the correlation.

strongEigenvectors - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

The strong eigenvectors to their corresponding filtered eigenvalues.

StudentDistribution - Class in de.lmu.ifi.dbs.elki.math.statistics

Tabelarizes the values for student distribution.

StudentDistribution() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.StudentDistribution

style - Variable in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Primary style information

STYLE_CURVES_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis1d.P1DHistogramVisualizer.Factory

Flag to specify the "curves" rendering style.

stylelib - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerContext

The style library of this context

stylelib - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerParameterizer.Parameterizer

stylelib - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerParameterizer

Style library to use.

STYLELIB_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerParameterizer

Parameter to get the style properties file.

StyleLibrary - Interface in de.lmu.ifi.dbs.elki.visualization.style

Style library interface.

sub - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem.ItmItr

sub - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem.VisItr

SUBCLU<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.subspace

Implementation of the SUBCLU algorithm, an algorithm to detect arbitrarily shaped and positioned clusters in subspaces.

SUBCLU(AbstractDimensionsSelectingDoubleDistanceFunction<V>, DoubleDistance, int) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU

Constructor.

SUBCLU.Parameterizer<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.subspace

Parameterization class.

SUBCLU.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU.Parameterizer

subitems - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem

Subitems to plot

subiter - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy.HierarchyHashmapList.ItrAnc

Iterator of current parent

subiter - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy.HierarchyHashmapList.ItrDesc

Iterator of current child

subiter - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy.HierarchyReferenceLists.ItrAnc

Iterator of current parent

subiter - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy.HierarchyReferenceLists.ItrDesc

Iterator of current child

subspace - Variable in class de.lmu.ifi.dbs.elki.data.model.SubspaceModel

The subspace of the cluster.

Subspace<V extends FeatureVector<V,?>> - Class in de.lmu.ifi.dbs.elki.data

Represents a subspace of the original data space.

Subspace(int) - Constructor for class de.lmu.ifi.dbs.elki.data.Subspace

Creates a new one-dimensional subspace of the original data space.

Subspace(BitSet) - Constructor for class de.lmu.ifi.dbs.elki.data.Subspace

Creates a new k-dimensional subspace of the original data space.

Subspace.DimensionComparator - Class in de.lmu.ifi.dbs.elki.data

A comparator for subspaces based on their involved dimensions.

Subspace.DimensionComparator() - Constructor for class de.lmu.ifi.dbs.elki.data.Subspace.DimensionComparator

SUBSPACE_PATTERN - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

The pattern for parsing subspace values

subspacedim() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Return dimensionality of spanned subspace.

SubspaceDistance - Class in de.lmu.ifi.dbs.elki.distance.distancevalue

The subspace distance is a special distance that indicates the dissimilarity between subspaces of equal dimensionality.

SubspaceDistance() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

Empty constructor for serialization purposes.

SubspaceDistance(double, double) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

Constructs a new SubspaceDistance object consisting of the specified subspace distance and affine distance.

subspaceDistance - Variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

The subspace distance.

SubspaceDistanceFunction - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.subspace

Provides a distance function to determine a kind of correlation distance between two points, which is a pair consisting of the distance between the two subspaces spanned by the strong eigenvectors of the two points and the affine distance between the two subspaces.

SubspaceDistanceFunction(IndexFactory<NumberVector<?, ?>, FilteredLocalPCAIndex<NumberVector<?, ?>>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction

Constructor

SubspaceDistanceFunction.Instance<V extends NumberVector<?,?>> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.subspace

The actual instance bound to a particular database.

SubspaceDistanceFunction.Instance(Relation<V>, FilteredLocalPCAIndex<V>, SubspaceDistanceFunction) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction.Instance

SubspaceDistanceFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.subspace

Parameterization class.

SubspaceDistanceFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction.Parameterizer

SubspaceModel<V extends FeatureVector<V,?>> - Class in de.lmu.ifi.dbs.elki.data.model

Model for Subspace Clusters.

SubspaceModel(Subspace<V>, V) - Constructor for class de.lmu.ifi.dbs.elki.data.model.SubspaceModel

Creates a new SubspaceModel for the specified subspace with the given cluster mean.

subspaceOutlierDegree(O, O, BitSet) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODModel

SubspaceProjectionIndex<NV extends NumberVector<?,?>,P extends ProjectionResult> - Interface in de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj

Interface for an index providing local subspaces.

SubspaceProjectionIndex.Factory<NV extends NumberVector<?,?>,I extends SubspaceProjectionIndex<NV,?>> - Interface in de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj

Factory interface

SubspaceProjectionResult - Class in de.lmu.ifi.dbs.elki.math.linearalgebra

Simple class wrapping the result of a subspace projection.

SubspaceProjectionResult(int, Matrix) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SubspaceProjectionResult

Constructor.

sumFirstIntegers(long) - Static method in class de.lmu.ifi.dbs.elki.math.MathUtil

Compute the sum of the i first integers.

superclass - Variable in class de.lmu.ifi.dbs.elki.properties.IterateKnownImplementations

Super class

supports - Variable in class de.lmu.ifi.dbs.elki.result.AprioriResult

The supports of all itemsets.

svd() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Singular Value Decomposition

SVG_COLOR_NAMES - Static variable in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

SVG color names conversion.

svgCanvas - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

svgCanvas - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

The SVG canvas.

svgCanvas - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.SimpleSVGViewer

The main canvas.

svgCircle(double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Create a SVG circle

svgCircle(Document, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Create a SVG circle element.

svgElement(String) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Create a SVG element in the SVG namespace.

svgElement(Document, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Create a SVG element in appropriate namespace

SVGHyperCube - Class in de.lmu.ifi.dbs.elki.visualization.svg

Utility class to draw hypercubes, wireframe and filled.

SVGHyperCube() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGHyperCube

SVGHyperSphere - Class in de.lmu.ifi.dbs.elki.visualization.svg

Utility class to draw hypercubes, wireframe and filled.

SVGHyperSphere() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGHyperSphere

svgLine(double, double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Create a SVG line element

svgLine(Document, double, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Create a SVG line element.

svgp - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea

The plot we are attached to.

svgp - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizationTask

The plot to draw onto

svgp - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization

The plot we are attached to

SVGPath - Class in de.lmu.ifi.dbs.elki.visualization.svg

Element used for building an SVG path using a string buffer.

SVGPath() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath

Empty path constructor.

SVGPath(double, double) - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath

Constructor with initial point.

SVGPath(Iterable<Vector>) - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath

Constructor from a vector collection (e.g. a polygon)

SVGPlot - Class in de.lmu.ifi.dbs.elki.visualization.svg

Base class for SVG plots.

SVGPlot() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Create a new plotting document.

svgRect(double, double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Create a SVG rectangle

svgRect(Document, double, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Create a SVG rectangle element.

SVGSaveDialog - Class in de.lmu.ifi.dbs.elki.visualization.savedialog

A save dialog to save/export a SVG image to a file.

SVGSaveDialog() - Constructor for class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog

SVGSimpleLinearAxis - Class in de.lmu.ifi.dbs.elki.visualization.svg

Class to draw a simple axis with tick marks on the plot.

SVGSimpleLinearAxis() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis

SVGSimpleLinearAxis.ALIGNMENT - Enum in de.lmu.ifi.dbs.elki.visualization.svg

Flag for axis label position.

SVGSimpleLinearAxis.ALIGNMENT() - Constructor for enum de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis.ALIGNMENT

svgText(double, double, String) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Create a SVG text element.

svgText(Document, double, double, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Create a SVG text element.

SVGUtil - Class in de.lmu.ifi.dbs.elki.visualization.svg

Utility class for SVG processing.

SVGUtil() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

svgWaitIcon(Document, double, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Draw a simple "please wait" icon (in-progress) as placeholder for running renderings.

swap(double[], int, int) - Static method in class de.lmu.ifi.dbs.elki.math.statistics.QuickSelect

The usual swap method.

swap(int, int) - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.Heap

Swap two elements in the heap.

SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair

Comparator to compare by swapped components

SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair

Comparator to compare by swapped components

SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair

Comparator to compare by swapped components

SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair

Comparator to compare by swapped components

sync - Variable in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner

Owner/Synchronization object

synchronizedRedraw() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization

Trigger a redraw, but avoid excessive redraws.

synchronizer - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas

Synchronizer to use when synchronizing SVG plots

synchronizer - Variable in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner

Synchronizer that can block events from being executed right away.

synchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Assign an update synchronizer.

synchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner

Set a new update synchronizer.

syncrunner - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer

The current Runnable scheduled