A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

O

objcnt - Variable in class de.lmu.ifi.dbs.elki.datasource.filter.InverseDocumentFrequencyNormalization

The number of objects in the dataset

object - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerPriorityObject

Stored object.

object - Variable in class de.lmu.ifi.dbs.elki.utilities.iterator.OneItemIterator

Object to return.

ObjectBundle - Interface in de.lmu.ifi.dbs.elki.datasource.bundle

Abstract interface for object packages.

ObjectFilter - Interface in de.lmu.ifi.dbs.elki.datasource.filter

Object filters as part of the input step.

objectID - Variable in class de.lmu.ifi.dbs.elki.result.optics.DoubleDistanceClusterOrderEntry

The id of the entry.

objectID - Variable in class de.lmu.ifi.dbs.elki.result.optics.GenericClusterOrderEntry

The id of the entry.

objectIDs - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS.ORCLUSCluster

The ids of the objects belonging to this cluster.

objectIDs - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS.PROCLUSCluster

The ids of the objects belonging to this cluster.

objectIsInKNN - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.LOF

Include object itself in kNN neighborhood.

objectIsInKNN - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.LoOP

Include object itself in kNN neighborhood.

objectIsInKNN - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.MinKDistance

Include object itself in kNN neighborhood.

ObjectListParameter<C> - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Parameter that represents a list of objects (in contrast to a class list parameter, they will be instanced at most once.)

ObjectListParameter(OptionID, Class<?>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectListParameter

Constructor with optional flag.

ObjectListParameter(OptionID, Class<?>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectListParameter

Constructor for non-optional.

ObjectNotFoundException - Exception in de.lmu.ifi.dbs.elki.utilities.exceptions

Exception thrown when the requested object was not found in the database.

ObjectNotFoundException(DBID) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.ObjectNotFoundException

Object

ObjectParameter<C> - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Parameter class for a parameter representing a single object.

ObjectParameter(OptionID, Class<?>, Class<?>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter

Constructs a class parameter with the given optionID, restriction class, and default value.

ObjectParameter(OptionID, Class<?>, T) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter

Constructs a class parameter with the given optionID, restriction class, and default value.

ObjectParameter(OptionID, Class<?>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter

Constructs a class parameter with the given optionID, restriction class, and optional flag.

ObjectParameter(OptionID, Class<?>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter

Constructs a class parameter with the given optionID, and restriction class.

objects - Variable in class de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent

The objects that were changed in the DataStore mapped by the type of change.

objects - Variable in class de.lmu.ifi.dbs.elki.datasource.parser.DistanceParsingResult

Objects representation (DBIDs and/or external IDs)

objects - Variable in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.KNNChangeEvent

The ids of the kNNs that were inserted or deleted due to the insertion or removals of objects.

objectsForPCA(DBID) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.localpca.AbstractFilteredPCAIndex

Returns the objects to be considered within the PCA for the specified query object.

objectsForPCA(DBID) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.localpca.KNNQueryFilteredPCAIndex

objectsForPCA(DBID) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.localpca.RangeQueryFilteredPCAIndex

objectsInserted(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor

objectsInserted(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor

Called after new objects have been inserted, updates the materialized neighborhood.

objectsRemoved(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor

objectsRemoved(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor

Called after objects have been removed, updates the materialized neighborhood.

objWithId - Variable in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Manage objects with an id.

Observable<T> - Interface in de.lmu.ifi.dbs.elki.utilities.designpattern

Observable design pattern.

Observer<T> - Interface in de.lmu.ifi.dbs.elki.utilities.designpattern

Simple Observer design pattern.

observers - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Observers of this panel

Observers<T> - Class in de.lmu.ifi.dbs.elki.utilities.designpattern

Class to manage the observers of an instance.

Observers() - Constructor for class de.lmu.ifi.dbs.elki.utilities.designpattern.Observers

Constructor.

off - Variable in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerArrayStaticDBIDs.Itr

offer(E) - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.Heap

offer(E) - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.TopBoundedHeap

offer(O) - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap

offset - Variable in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Array shift to account for negative indices.

ok - Variable in class de.lmu.ifi.dbs.elki.math.ConvexHull2D

Flag to indicate that the hull has been computed.

ON_DATA - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualization

Constant to listen for data changes

ON_SELECTION - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualization

Constant to listen for selection changes

OnDiskArray - Class in de.lmu.ifi.dbs.elki.persistent

On Disc Array storage for records of a given size.

OnDiskArray(File, int, int, int, int) - Constructor for class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Constructor to write a new file.

OnDiskArray(File, int, int, int, boolean) - Constructor for class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Constructor to open an existing file.

OnDiskArray(File, int, int, boolean) - Constructor for class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Constructor to open an existing file.

OnDiskArrayPageFile<P extends Page> - Class in de.lmu.ifi.dbs.elki.persistent

A OnDiskArrayPageFile stores objects persistently that implement the Page interface.

OnDiskArrayPageFile(int, String) - Constructor for class de.lmu.ifi.dbs.elki.persistent.OnDiskArrayPageFile

Creates a new OnDiskArrayPageFile from an existing file.

OnDiskUpperTriangleMatrix - Class in de.lmu.ifi.dbs.elki.persistent

Class representing an upper triangle matrix backed by an on-disk array of O((n+1)*n/2) size

OnDiskUpperTriangleMatrix(File, int, int, int, boolean) - Constructor for class de.lmu.ifi.dbs.elki.persistent.OnDiskUpperTriangleMatrix

Constructor to access an existing array.

OnDiskUpperTriangleMatrix(File, int, int, int, int) - Constructor for class de.lmu.ifi.dbs.elki.persistent.OnDiskUpperTriangleMatrix

Constructor to access a new array.

ONE - Static variable in class de.lmu.ifi.dbs.elki.data.RationalNumber

The canonical representation of 1 as RationalNumber.

ONE_BY_SQRTPI - Static variable in class de.lmu.ifi.dbs.elki.math.MathUtil

Precomputed value of 1 / sqrt(pi)

ONEBYSQRT2PI - Static variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MixtureModelOutlierScalingFunction

Precomputed static value

OneDimensionalDoubleVector - Class in de.lmu.ifi.dbs.elki.data

Specialized class implementing a one-dimensional double vector without using an array.

OneDimensionalDoubleVector(double) - Constructor for class de.lmu.ifi.dbs.elki.data.OneDimensionalDoubleVector

Constructor.

OneItemIterator<T> - Class in de.lmu.ifi.dbs.elki.utilities.iterator

Dummy iterator/iterable that returns a single object, once.

OneItemIterator(T) - Constructor for class de.lmu.ifi.dbs.elki.utilities.iterator.OneItemIterator

Constructor.

OneMustBeSetGlobalConstraint - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Represents a global parameter constraint specifying that at least one parameter value of a given list of parameters (Parameter) has to be set.

OneMustBeSetGlobalConstraint(List<Parameter<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.OneMustBeSetGlobalConstraint

Creates a One-Must-Be-Set global parameter constraint.

OnlineLOF<O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Incremental version of the LOF Algorithm, supports insertions and removals.

OnlineLOF(int, DistanceFunction<? super O, D>, DistanceFunction<? super O, D>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.OnlineLOF

Constructor.

OnlineLOF.LOFKNNListener - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Encapsulates a listener for changes of kNNs used in the online LOF algorithm.

OnlineLOF.LOFKNNListener(LOF.LOFResult<O, D>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.OnlineLOF.LOFKNNListener

Constructs a listener for the LOF algorithm.

OnlineLOF.Parameterizer<O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Parameterization class.

OnlineLOF.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.OnlineLOF.Parameterizer

OnlyOneIsAllowedToBeSetGlobalConstraint - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Global parameter constraint specifying that only one parameter of a list of parameters (Parameter) is allowed to be set.

OnlyOneIsAllowedToBeSetGlobalConstraint(List<Parameter<?, ?>>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.OnlyOneIsAllowedToBeSetGlobalConstraint

Constructs a global parameter constraint for testing if only one parameter of a list of parameters is set.

OPACITY - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Opacity (transparency)

opacStyle - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.EMClusterVisualization

openStream(String) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.MultipleFilesOutput

Retrieve the output stream for the given file name.

openStream(String) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput

Return the objects shared print stream.

openStream(String) - Method in interface de.lmu.ifi.dbs.elki.result.textwriter.StreamFactory

Retrieve a print stream for output using the given label.

openSystemFile(String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FileUtil

Try to open a file, first trying the file system, then falling back to the classpath.

OPTICS<O,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

OPTICS provides the OPTICS algorithm.

OPTICS(DistanceFunction<? super O, D>, D, int) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS

Constructor.

optics - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi

The actual algorithm we use.

optics - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.Parameterizer

optics - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.AbstractOPTICSVisualization

The plot

OPTICS.Parameterizer<O,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Parameterization class.

OPTICS.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS.Parameterizer

opticsAlgorithmParameters - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH

Parameters that were given to OPTICS

OPTICSClusterVisualization<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Visualize the clusters and cluster hierarchy found by OPTICS on the OPTICS Plot.

OPTICSClusterVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSClusterVisualization

Constructor.

OPTICSClusterVisualization.Factory - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Factory class for OPTICS plot selections.

OPTICSClusterVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSClusterVisualization.Factory

Constructor, adhering to Parameterizable

OPTICSColorAdapter - Interface in de.lmu.ifi.dbs.elki.visualization.opticsplot

Class to handle coloring of the OPTICS plot.

OPTICSColorFromClustering - Class in de.lmu.ifi.dbs.elki.visualization.opticsplot

Adapter that uses an existing clustering to colorize the OPTICS plot.

OPTICSColorFromClustering(ColorLibrary, Clustering<?>) - Constructor for class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSColorFromClustering

Constructor.

OPTICSColorStatic - Class in de.lmu.ifi.dbs.elki.visualization.opticsplot

Pseudo-coloring for OPTICS plot that just uses a static color.

OPTICSColorStatic(int) - Constructor for class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSColorStatic

Constructor.

OPTICSCorrelationDimensionalityDistance<D extends CorrelationDistance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.opticsplot

Adapter that will map a correlation distance to its dimensionality.

OPTICSCorrelationDimensionalityDistance() - Constructor for class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSCorrelationDimensionalityDistance

Default constructor.

OPTICSCut - Class in de.lmu.ifi.dbs.elki.visualization.opticsplot

Compute a partitioning from an OPTICS plot by doing a horizontal cut.

OPTICSCut() - Constructor for class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSCut

OPTICSDistanceAdapter<D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.visualization.opticsplot

Interface to map ClusterOrderEntries to double values to use in the OPTICS plot.

OPTICSModel - Class in de.lmu.ifi.dbs.elki.data.model

Model for an OPTICS cluster

OPTICSModel(int, int) - Constructor for class de.lmu.ifi.dbs.elki.data.model.OPTICSModel

OPTICSNumberDistance<D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.visualization.opticsplot

Adapter that will map a regular number distance to its double value.

OPTICSNumberDistance() - Constructor for class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSNumberDistance

Default constructor.

opticsO - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH.Parameterizer

OPTICSOF<O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

OPTICSOF provides the Optics-of algorithm, an algorithm to find Local Outliers in a database.

OPTICSOF(DistanceFunction<? super O, D>, int) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.OPTICSOF

Constructor with parameters.

OPTICSOF.Parameterizer<O,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Parameterization class.

OPTICSOF.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.OPTICSOF.Parameterizer

OPTICSPlot<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.opticsplot

Class to produce an OPTICS plot image.

OPTICSPlot(ClusterOrderResult<D>, OPTICSColorAdapter, OPTICSDistanceAdapter<D>) - Constructor for class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

Constructor.

OPTICSPlot(ClusterOrderResult<D>, OPTICSColorAdapter) - Constructor for class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

Constructor, with automatic distance adapter detection.

OPTICSPlotCutVisualization<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Visualizes a cut in an OPTICS Plot to select an Epsilon value and generate a new clustering result

OPTICSPlotCutVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotCutVisualization

Constructor.

OPTICSPlotCutVisualization.Factory - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Factory class

OPTICSPlotCutVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotCutVisualization.Factory

OPTICSPlotSelectionVisualization<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Handle the marker in an OPTICS plot.

OPTICSPlotSelectionVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotSelectionVisualization

Constructor.

OPTICSPlotSelectionVisualization.Factory - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Factory class for OPTICS plot selections.

OPTICSPlotSelectionVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotSelectionVisualization.Factory

Constructor, adhering to Parameterizable

OPTICSPlotSelectionVisualization.Mode - Enum in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Input modes

OPTICSPlotSelectionVisualization.Mode() - Constructor for enum de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotSelectionVisualization.Mode

OPTICSPlotVisualizer<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Visualize an OPTICS result by constructing an OPTICS plot for it.

OPTICSPlotVisualizer(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotVisualizer

Constructor.

OPTICSPlotVisualizer.Factory - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Factory class for OPTICS plot.

OPTICSPlotVisualizer.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotVisualizer.Factory

Constructor, adhering to Parameterizable

OPTICSProjector<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.projector

Projection for OPTICS plots.

OPTICSProjector(ClusterOrderResult<D>) - Constructor for class de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjector

Constructor.

OPTICSProjectorFactory - Class in de.lmu.ifi.dbs.elki.visualization.projector

Produce OPTICS plot projections

OPTICSProjectorFactory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjectorFactory

Constructor.

OPTICSSteepAreaVisualization<D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Visualize the steep areas found in an OPTICS plot

OPTICSSteepAreaVisualization(VisualizationTask) - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSSteepAreaVisualization

Constructor.

OPTICSSteepAreaVisualization.Factory - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.optics

Factory class for OPTICS plot selections.

OPTICSSteepAreaVisualization.Factory() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSSteepAreaVisualization.Factory

Constructor, adhering to Parameterizable

OPTICSTypeAlgorithm<D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.algorithm.clustering

Interface for OPTICS type algorithms, that can be analysed by OPTICS Xi etc.

OPTICSXi<N extends NumberDistance<N,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Class to handle OPTICS Xi extraction.

OPTICSXi(OPTICSTypeAlgorithm<N>, double) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi

Constructor.

OPTICSXi.Parameterizer<D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Parameterization class.

OPTICSXi.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.Parameterizer

OPTICSXi.SteepArea - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Data structure to represent a steep-down-area for the xi method.

OPTICSXi.SteepArea(int, int, double) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepArea

Constructor.

OPTICSXi.SteepAreaResult - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Result containing the chi-steep areas.

OPTICSXi.SteepAreaResult(Collection<OPTICSXi.SteepArea>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepAreaResult

Constructor.

OPTICSXi.SteepDownArea - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Data structure to represent a steep-down-area for the xi method.

OPTICSXi.SteepDownArea(int, int, double, double) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepDownArea

Constructor

OPTICSXi.SteepScanPosition<N extends NumberDistance<N,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Position when scanning for steep areas

OPTICSXi.SteepScanPosition(List<ClusterOrderEntry<N>>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepScanPosition

Constructor.

OPTICSXi.SteepUpArea - Class in de.lmu.ifi.dbs.elki.algorithm.clustering

Data structure to represent a steep-down-area for the xi method.

OPTICSXi.SteepUpArea(int, int, double) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepUpArea

Constructor

optimize(int, int, double, double, double, double, double, double) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTree

OPTION_PREFIX - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization

Prefix of option markers on the command line.

optionalParameter - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Specifies if this parameter is an optional parameter.

OptionID - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling

An OptionID is used by option handlers as a unique identifier for specific options.

OptionID(String, String) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID

Provides a new OptionID of the given name and description.

optionid - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

The option name.

options - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters

Tracking storage

optionsNamesToString(List<O>) - Static method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionUtil

Returns a string representation of the specified list of options containing the names of the options.

optionsNamesToString(O[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionUtil

Returns a string representation of the specified list of options containing the names of the options.

OptionUtil - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling

Utility functions related to Option handling.

OptionUtil() - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionUtil

ORCLUS<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.correlation

ORCLUS provides the ORCLUS algorithm, an algorithm to find clusters in high dimensional spaces.

ORCLUS(int, int, int, double, long, PCARunner<V>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS

Java constructor.

ORCLUS.ORCLUSCluster - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.correlation

Encapsulates the attributes of a cluster.

ORCLUS.ORCLUSCluster() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS.ORCLUSCluster

Creates a new empty cluster.

ORCLUS.ORCLUSCluster(V, DBID, V) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS.ORCLUSCluster

Creates a new cluster containing the specified object o.

ORCLUS.Parameterizer<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.correlation

Parameterization class.

ORCLUS.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS.Parameterizer

ORCLUS.ProjectedEnergy - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.correlation

Encapsulates the projected energy for a cluster.

ORCLUS.ProjectedEnergy(int, int, ORCLUS<V>.ORCLUSCluster, DoubleDistance) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS.ProjectedEnergy

ordering - Variable in class de.lmu.ifi.dbs.elki.result.outlier.OutlierResult

Outlier ordering.

OrderingFromDataStore<T extends Comparable<T>> - Class in de.lmu.ifi.dbs.elki.result

Result class providing an ordering backed by a hashmap.

OrderingFromDataStore(String, String, DBIDs, DataStore<? extends T>, Comparator<T>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.OrderingFromDataStore

Constructor with comparator

OrderingFromDataStore(String, String, DBIDs, DataStore<? extends T>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.OrderingFromDataStore

Constructor without comparator

OrderingFromDataStore(String, String, DBIDs, DataStore<? extends T>) - Constructor for class de.lmu.ifi.dbs.elki.result.OrderingFromDataStore

Minimal Constructor

OrderingFromDataStore.DerivedComparator - Class in de.lmu.ifi.dbs.elki.result

Internal comparator, accessing the map but then using the provided comparator to sort objects

OrderingFromDataStore.DerivedComparator() - Constructor for class de.lmu.ifi.dbs.elki.result.OrderingFromDataStore.DerivedComparator

OrderingFromDataStore.ImpliedComparator - Class in de.lmu.ifi.dbs.elki.result

Internal comparator, accessing the map to sort objects

OrderingFromDataStore.ImpliedComparator() - Constructor for class de.lmu.ifi.dbs.elki.result.OrderingFromDataStore.ImpliedComparator

OrderingFromRelation - Class in de.lmu.ifi.dbs.elki.result.outlier

Ordering obtained from an outlier score.

OrderingFromRelation(Relation<Double>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.outlier.OrderingFromRelation

Constructor for outlier orderings

OrderingFromRelation(Relation<Double>) - Constructor for class de.lmu.ifi.dbs.elki.result.outlier.OrderingFromRelation

Ascending constructor.

OrderingFromRelation.ImpliedComparator - Class in de.lmu.ifi.dbs.elki.result.outlier

Internal comparator, accessing the map to sort objects

OrderingFromRelation.ImpliedComparator() - Constructor for class de.lmu.ifi.dbs.elki.result.outlier.OrderingFromRelation.ImpliedComparator

OrderingResult - Interface in de.lmu.ifi.dbs.elki.result

Interface for a result providing an object ordering.

orep - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow

Object label representation

ort - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition

Working storage for nonsymmetric algorithm.

orthes() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition

orthonormalize() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns an orthonormalization of this matrix.

out - Variable in class de.lmu.ifi.dbs.elki.application.cache.CacheDoubleDistanceInOnDiskMatrix

Output file.

out - Variable in class de.lmu.ifi.dbs.elki.application.cache.CacheDoubleDistanceInOnDiskMatrix.Parameterizer

Output file.

out - Variable in class de.lmu.ifi.dbs.elki.application.cache.CacheFloatDistanceInOnDiskMatrix

Output file.

out - Variable in class de.lmu.ifi.dbs.elki.application.cache.CacheFloatDistanceInOnDiskMatrix.Parameterizer

Output file.

out - Variable in class de.lmu.ifi.dbs.elki.logging.CLISmartHandler

Output stream for non-critical output.

out - Variable in class de.lmu.ifi.dbs.elki.result.ResultWriter

Holds the file to print results to.

out - Variable in class de.lmu.ifi.dbs.elki.result.ResultWriter.Parameterizer

Holds the file to print results to.

outclass - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.CSSHoverClass

Class to set when out

OUTER_DISTANCE_FUNCTION_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.AbstractProjectedDBSCAN

Parameter to specify the distance function to determine the distance between database objects, must extend LocallyWeightedDistanceFunction .

outerdist - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.AbstractProjectedDBSCAN.Parameterizer

OUTLIER_PATTERN_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.ByLabelOutlier.Parameterizer

The pattern to match outliers with.

OutlierAlgorithm - Interface in de.lmu.ifi.dbs.elki.algorithm.outlier

Generic super interface for outlier detection algorithms.

OutlierGammaScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Scaling that can map arbitrary values to a probability in the range of [0:1] by assuming a Gamma distribution on the values.

OutlierGammaScaling(boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierGammaScaling

Constructor.

OutlierGammaScaling.Parameterizer - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Parameterization class.

OutlierGammaScaling.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierGammaScaling.Parameterizer

OutlierLinearScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Scaling that can map arbitrary values to a probability in the range of [0:1].

OutlierLinearScaling() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling

Constructor.

OutlierLinearScaling(Double, Double, boolean, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling

Constructor.

OutlierLinearScaling.Parameterizer - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Parameterization class.

OutlierLinearScaling.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling.Parameterizer

outlierMetaToJSON(JSONBuffer, OutlierScoreMeta) - Method in class de.lmu.ifi.dbs.elki.application.jsmap.JSONWebServer

Serialize outlier metadata as JSON.

OutlierMinusLogScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Scaling function to invert values by computing -1 * Math.log(x) Useful for example for scaling ABOD, but see MinusLogStandardDeviationScaling and MinusLogGammaScaling for more advanced scalings for this algorithm.

OutlierMinusLogScaling() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierMinusLogScaling

Constructor, adhering to Parameterizable

OutlierResult - Class in de.lmu.ifi.dbs.elki.result.outlier

Wrap a typical Outlier result, keeping direct references to the main result parts.

OutlierResult(OutlierScoreMeta, Relation<Double>) - Constructor for class de.lmu.ifi.dbs.elki.result.outlier.OutlierResult

Constructor.

OutlierScalingFunction - Interface in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Interface for scaling functions used by Outlier evaluation such as Histograms and visualization.

OutlierScoreMeta - Interface in de.lmu.ifi.dbs.elki.result.outlier

Generic meta information about the value range of an outlier score.

OutlierSqrtScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Scaling that can map arbitrary positive values to a value in the range of [0:1].

OutlierSqrtScaling(Double, Double) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling

Constructor.

OutlierSqrtScaling.Parameterizer - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier

Parameterization class.

OutlierSqrtScaling.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling.Parameterizer

output(Database, Result, StreamFactory) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriter

Stream output.

OUTPUT - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID

OptionID for the application output file/folder

OUTPUT_ACCURACY_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator

Parameter to specify the threshold for output accuracy fraction digits, must be an integer equal to or greater than 0.

OUTPUT_ID - Static variable in class de.lmu.ifi.dbs.elki.application.AbstractApplication

Parameter that specifies the name of the output file.

outputAccuracy - Variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator.Parameterizer

outputArea - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Logging output area.

outputArea - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.MultiStepGUI

Logging output area.

outputFile - Variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec

Output file.

outputFile - Variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec.Parameterizer

Output file.

outputStep - Variable in class de.lmu.ifi.dbs.elki.KDDTask

The output/visualization step

outputStep - Variable in class de.lmu.ifi.dbs.elki.KDDTask.Parameterizer

OutputStep - Class in de.lmu.ifi.dbs.elki.workflow

The "output" step, where data is analyzed.

OutputStep(List<ResultHandler>) - Constructor for class de.lmu.ifi.dbs.elki.workflow.OutputStep

Constructor.

OutputStep.Parameterizer - Class in de.lmu.ifi.dbs.elki.workflow

Parameterization class.

OutputStep.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.workflow.OutputStep.Parameterizer

OutputStreamLogger - Class in de.lmu.ifi.dbs.elki.logging

Class to write to Output Streams, IGNORING OutputStreamLogger.close(), with a special newline handling and always flushing.

OutputStreamLogger(OutputStream) - Constructor for class de.lmu.ifi.dbs.elki.logging.OutputStreamLogger

Constructor.

OutputStreamLogger(OutputStream, String) - Constructor for class de.lmu.ifi.dbs.elki.logging.OutputStreamLogger

Constructor.

OutputStreamLogger(OutputStream, Charset) - Constructor for class de.lmu.ifi.dbs.elki.logging.OutputStreamLogger

Constructor.

OutputStreamLogger(OutputStream, CharsetEncoder) - Constructor for class de.lmu.ifi.dbs.elki.logging.OutputStreamLogger

Constructor.

OutputTabPanel - Class in de.lmu.ifi.dbs.elki.gui.multistep.panels

Panel to handle result output / visualization

OutputTabPanel(InputTabPanel, EvaluationTabPanel) - Constructor for class de.lmu.ifi.dbs.elki.gui.multistep.panels.OutputTabPanel

Constructor.

outs - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.panels.OutputTabPanel

The data input configured

outStream - Variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream

Actual stream to write to.

outTab - Variable in class de.lmu.ifi.dbs.elki.gui.multistep.MultiStepGUI

overclass - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.CSSHoverClass

Class to set when over

overflowTreatment(N, IndexTreePath<E>) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Treatment of overflow in the specified node: if the node is not the root node and this is the first call of overflowTreatment in the given level during insertion the specified node will be reinserted, otherwise the node will be split.

overlapInc - Variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.Enlargement

The increment of the overlap.

OVERLAY - Static variable in class de.lmu.ifi.dbs.elki.data.images.BlendComposite

"Overlay" blending.

overview - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.DetailViewSelectedEvent

Parent overview plot.

overview - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

The overview plot.

overviewItem - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

The "Overview" button, which goes to the overview view.

OverviewPlot - Class in de.lmu.ifi.dbs.elki.visualization.gui.overview

Generate an overview plot for a set of visualizations.

OverviewPlot(HierarchicalResult, VisualizerContext) - Constructor for class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot

Constructor.

OverviewPlot.SelectPlotEvent - Class in de.lmu.ifi.dbs.elki.visualization.gui.overview

Event when a plot was selected.

OverviewPlot.SelectPlotEvent(PlotItem) - Constructor for class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot.SelectPlotEvent

Constructor.

OVERWRITE_OPTION_ID - Static variable in class de.lmu.ifi.dbs.elki.result.ResultWriter

Flag to suppress overwrite warning.

owner - Variable in class de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy.HierarchyReferenceLists

Owner

owner - Variable in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Owner.