A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

U

u - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull

Number of points in upper hull.

u - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Holds the space of solutions of the homogeneous linear equation system.

U - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition

Arrays for internal storage of U and V.

uglyCastIntoSubclass(Class<D>) - Static method in class de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil

Cast the (erased) generics onto a class.

uglyCrossCast(Class<FROM>, Class<BASE>) - Static method in class de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil

This class performs an ugly cast, from Class<F> to Class<T>, where both F and T need to extend B.

umadapter - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer

Adapter to track component changes

UnableToComplyException - Exception in de.lmu.ifi.dbs.elki.utilities.exceptions

General Exception to state inability to execute an operation.

UnableToComplyException() - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException

Exception to state inability to execute an operation.

UnableToComplyException(String) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException

Exception to state inability to execute an operation.

UnableToComplyException(String, Throwable) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException

Exception to state inability to execute an operation.

UnableToComplyException(Throwable) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException

Exception to state inability to execute an operation.

unbox(Double[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.Util

Returns the unboxed double array of the given Object Double array.

unbox(Number[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.Util

Returns the unboxed double array of the given Object Number array.

unboxToFloat(Number[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.Util

Returns the unboxed float array of the given Object Number array.

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.database.query.distance.AbstractDistanceQuery

Provides an undefined distance.

undefinedDistance() - Method in interface de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery

Provides an undefined distance.

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.BitDistance

undefinedDistance() - Method in interface de.lmu.ifi.dbs.elki.distance.distancevalue.Distance

Provides an undefined distance.

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance

An undefined DoubleDistance is based on Double.NaN.

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

An undefined FloatDistance is based on Float.NaN.

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.PCACorrelationDistance

Provides an undefined distance.

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.PreferenceVectorBasedCorrelationDistance

undefinedDistance() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

unhomogeneRelativeVector(Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation

Project an homogeneous vector back into the original space.

unhomogeneVector(Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation

Project an homogeneous vector back into the original space.

UniformDistribution - Class in de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution

Simple uniform distribution class

UniformDistribution(double, double, Random) - Constructor for class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.UniformDistribution

Constructor for a uniform distribution on the interval [min, max[

UniformKernelDensityFunction - Class in de.lmu.ifi.dbs.elki.math.statistics

Uniform / Rectangular kernel density estimator.

UniformKernelDensityFunction() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.UniformKernelDensityFunction

Private, empty constructor.

union(Relation<V>, DistanceQuery<V, DoubleDistance>, ORCLUS<V>.ORCLUSCluster, ORCLUS<V>.ORCLUSCluster, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS

Returns the union of the two specified clusters.

union(SpatialComparable, SpatialComparable) - Static method in class de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil

Computes the union HyperBoundingBox of two SpatialComparables.

union(DBIDs, DBIDs) - Static method in class de.lmu.ifi.dbs.elki.database.ids.DBIDUtil

Returns the union of the two specified collection of IDs.

unionTolerant(SpatialComparable, SpatialComparable) - Static method in class de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil

Returns the union of the two specified MBRs.

unitMatrix(int) - Static method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the unit matrix of the specified dimension.

unitVector(int, int) - Static method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Returns the ith unit vector of the specified dimensionality.

UNIX_NEWLINE - Static variable in class de.lmu.ifi.dbs.elki.logging.OutputStreamLogger

Unix newline

unmapByteBuffer(MappedByteBuffer) - Static method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Unmap a byte buffer.

UnmodifiableDBIDs - Class in de.lmu.ifi.dbs.elki.database.ids.generic

Unmodifiable wrapper for DBIDs.

UnmodifiableDBIDs(DBIDs) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.generic.UnmodifiableDBIDs

Constructor.

UnmodifiableIterator<T> - Class in de.lmu.ifi.dbs.elki.utilities.iterator

Iterator proxy that does not allow modifications.

UnmodifiableIterator(Iterator<T>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.iterator.UnmodifiableIterator

Constructor.

UnmodifiableListIterator<T> - Class in de.lmu.ifi.dbs.elki.utilities.iterator

Iterator proxy that does not allow modifications.

UnmodifiableListIterator(ListIterator<T>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.iterator.UnmodifiableListIterator

Constructor.

UnParameterization - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization

Parameterization handler that doesn't set any parameters.

UnParameterization() - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.UnParameterization

UNQUEUE(ThumbnailThread.Task) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailThread

Remove a pending task from the queue.

unsetEpsilon() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotCutVisualization

Reset the epsilon value.

UnspecifiedParameterException - Exception in de.lmu.ifi.dbs.elki.utilities.optionhandling

Exception when a required parameter was not given.

UnspecifiedParameterException(Parameter<?, ?>) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnspecifiedParameterException

Constructor with missing Parameter

UnspecifiedParameterException(Parameter<?, ?>, Throwable) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnspecifiedParameterException

Constructor with missing Parameter and cause

UnspecifiedParameterException(String) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnspecifiedParameterException

Constructor with error message.

UNSUPPORTED - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages

Generic "unsupported" message

UNSUPPORTED_NOT_YET - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages

Generic "not yet supported" message

UNSUPPORTED_REMOVE - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages

"remove unsupported" message for iterators

UNSUPPORTED_UNDEFINED_DISTANCE - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages

Message when a distance doesn't support undefined values.

unsynchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Detach from synchronization.

unsynchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner

Remove an update synchronizer

UnusedParameterException - Exception in de.lmu.ifi.dbs.elki.utilities.optionhandling

Thrown by OptionHandler in case of request of an unused parameter.

UnusedParameterException(String) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnusedParameterException

Thrown by OptionHandler in case of request of an unused parameter.

UnweightedNeighborhoodAdapter - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted

Adapter to use unweighted neighborhoods in an algorithm that requires weighted neighborhoods.

UnweightedNeighborhoodAdapter(NeighborSetPredicate) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.UnweightedNeighborhoodAdapter

Constructor.

UnweightedNeighborhoodAdapter.Factory<O> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted

Factory class

UnweightedNeighborhoodAdapter.Factory(NeighborSetPredicate.Factory<O>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.UnweightedNeighborhoodAdapter.Factory

Constructor.

UnweightedNeighborhoodAdapter.Factory.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted

Parameterization class.

UnweightedNeighborhoodAdapter.Factory.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.UnweightedNeighborhoodAdapter.Factory.Parameterizer

unwrapDistance(DistanceFunction<V, D>) - Static method in class de.lmu.ifi.dbs.elki.distance.distancefunction.ProxyDistanceFunction

Helper function, to resolve any wrapped Proxy Distances

UpdatableDatabase - Interface in de.lmu.ifi.dbs.elki.database

Database API with updates.

UpdatableHeap<O> - Class in de.lmu.ifi.dbs.elki.utilities.datastructures.heap

A heap as used in OPTICS that allows updating entries.

UpdatableHeap() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap

Simple constructor with default size.

UpdatableHeap(int) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap

Constructor with predefined size.

UpdatableHeap(Comparator<? super O>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap

Constructor with comparator

UpdatableHeap(int, Comparator<? super O>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap

Constructor with predefined size and comparator

update() - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

Force an update

update(Object) - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.AlgorithmTabPanel

update(Object) - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.EvaluationTabPanel

update(Object) - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.OutputTabPanel

update() - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel.SettingsComboboxModel

Force an update

update(T) - Method in interface de.lmu.ifi.dbs.elki.utilities.designpattern.Observer

This method is called when an observed object was updated.

update() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Refresh the overview

update(Result) - Method in class de.lmu.ifi.dbs.elki.workflow.EvaluationStep.Evaluation

Update on a particular result.

updateDB(DBIDs, Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.MoveObjectsToolVisualization

Updates the objects with the given DBIDs It will be moved depending on the given Vector

updateFilterSDASet(double, List<OPTICSXi.SteepDownArea>, double) - Static method in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi

Update the mib values of SteepDownAreas, and remove obsolete areas.

updateFromSelection() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow

Update our selection

updateFromTrackParameters(TrackParameters) - Method in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters

Update the Parameter list from the collected options of an ELKI context

updateInverse() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation

Compute the inverse transformation matrix

updateK(int) - Method in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

updateKNNsAfterDeletion(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor

Updates the kNNs of the RkNNs of the specified ids.

updateKNNsAfterInsertion(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor

Updates the kNNs of the RkNNs of the specified ids.

updateKNNsAndRkNNs(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor

Updates the kNNs and RkNNs after insertion of the specified ids.

updateMinMax(V, double[], double[]) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE

Updates the minima and maxima array according to the specified feature vector.

updateNames() - Method in class de.lmu.ifi.dbs.elki.result.textwriter.naming.SimpleEnumeratingScheme

Assign names to each cluster (which doesn't have a name yet)

updateNext() - Method in class de.lmu.ifi.dbs.elki.utilities.iterator.AbstractFilteredIterator

Find the next visualizer.

updateParameterTable() - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI

Serialize the parameter table and run setParameters()

updateParameterTable() - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Serialize the parameter table and run setParameters()

updateProgressBar(Progress, JProgressBar) - Method in class de.lmu.ifi.dbs.elki.gui.util.LogPanel

Update a progress bar

updaterunner - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer

The UpdateRunner we are put into

UpdateRunner - Class in de.lmu.ifi.dbs.elki.visualization.svg

Class to handle updates to an SVG plot, in particular when used in an Apache Batik UI.

UpdateRunner(Object) - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner

Construct a new update handler

updates - Variable in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.KNNChangeEvent

The ids of the kNNs that were updated due to the insertion or removals of objects.

updateSelection() - Method in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

Process the users new selection.

updateSelection(OPTICSPlotSelectionVisualization.Mode, int, int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotSelectionVisualization

Updates the selection for the given ClusterOrderEntry.

updateSelection(Projection, SVGPoint, SVGPoint) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolCubeVisualization

Update the selection in the context.

updateSelection(SelectionToolDotVisualization.Mode, Projection2D, SVGPoint, SVGPoint) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolDotVisualization

Updates the selection in the context.

updateSelectionRectKoordinates(double, double, double, double, DoubleDoublePair[]) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.SelectionToolCubeVisualization

Set the selected ranges and the mask for the actual dimensions in the context

updateSize() - Method in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

Update the SVG plot size.

updateStatus() - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel

Invoked to update the UI when the status could have changed.

updateStyleElement(Document, Element) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager

Update the text contents of an existing style element.

updateStyleElement() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Update style element - invoke this appropriately after any change to the CSS styles.

UpdateSynchronizer - Interface in de.lmu.ifi.dbs.elki.visualization.svg

API to synchronize updates

updateVisualizerMenus() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow

Update the visualizer menus.

upperHull - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull

The upper hull.

usage(Collection<Pair<Object, Parameter<?, ?>>>) - Static method in class de.lmu.ifi.dbs.elki.application.AbstractApplication

Returns a usage message, explaining all known options

usage - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.RectangleArranger

Bit sets to store usage.

usebulk - Static variable in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor

Flag to use bulk operations.

used - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.MergedParameterization

Parameters to rewind.

useDefaultValue() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Sets the default value of this parameter as the actual value of this parameter.

usegzip - Variable in class de.lmu.ifi.dbs.elki.result.textwriter.MultipleFilesOutput

Control gzip compression of output.

useMarker(SVGPlot, Element, double, double, int, double) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.marker.MarkerLibrary

Insert a marker at the given coordinates.

useMarker(SVGPlot, Element, double, double, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.style.marker.MinimalMarkers

Use a given marker on the document.

useMarker(SVGPlot, Element, double, double, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.style.marker.PrettyMarkers

usemean - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling.Parameterizer

Use the mean for scaling

usemean - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling

Use the mean for scaling

USER_REQUESTED_HELP - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages

Message when the user requested a help message.

useRNDSample - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

use alternate code below

Util - Class in de.lmu.ifi.dbs.elki.utilities

This class collects various static helper methods.

Util() - Constructor for class de.lmu.ifi.dbs.elki.utilities.Util

Util.MaskedArrayList<T> - Class in de.lmu.ifi.dbs.elki.utilities

This class is a virtual collection based on masking an array list using a bit mask.

Util.MaskedArrayList(ArrayList<T>, BitSet, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.Util.MaskedArrayList

Constructor.

Util.MaskedArrayList.InvItr - Class in de.lmu.ifi.dbs.elki.utilities

Iterator over unset elements.

Util.MaskedArrayList.InvItr() - Constructor for class de.lmu.ifi.dbs.elki.utilities.Util.MaskedArrayList.InvItr

Constructor

Util.MaskedArrayList.Itr - Class in de.lmu.ifi.dbs.elki.utilities

Iterator over set bits

Util.MaskedArrayList.Itr() - Constructor for class de.lmu.ifi.dbs.elki.utilities.Util.MaskedArrayList.Itr

Constructor