A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

F

f_maxima - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHIntervalSplit

Caches maximum function values for given intervals, used for better split performance.

f_minima - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHIntervalSplit

Caches minimum function values for given intervals, used for better split performance.

factor(int) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.AttributeWiseMinMaxNormalization

Returns a factor for normalization in a certain dimension.

factor - Variable in class de.lmu.ifi.dbs.elki.math.ConvexHull2D

Scaling factor if we have very small polygons.

factor - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling

Scaling factor

factor - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling

Scaling factor to use (1/ max - min)

factor - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling

Scaling factor

factor - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling

Scaling factor to use (usually: Lambda * Stddev * Sqrt(2))

factor - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling

Scaling factor to use (usually: Lambda * Stddev * Sqrt(2))

factorial(BigInteger) - Static method in class de.lmu.ifi.dbs.elki.math.MathUtil

Compute the Factorial of n, often written as c!

factorial(int) - Static method in class de.lmu.ifi.dbs.elki.math.MathUtil

Compute the Factorial of n, often written as c!

factories - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerContext

Factories to use

factories - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerParameterizer

(Result-to-visualization) Adapters

factories - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizerParameterizer.Parameterizer

factory - Variable in class de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation

Object factory for producing new instances

FACTORY - Static variable in interface de.lmu.ifi.dbs.elki.database.datastore.DataStoreFactory

Static storage factory

FACTORY - Static variable in interface de.lmu.ifi.dbs.elki.database.ids.DBIDFactory

Static DBID factory to use.

factory - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction.Parameterizer

The index factory we use.

FACTORY - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.BitDistance

The static factory instance

FACTORY - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance

The static factory instance

FACTORY - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

The static factory instance

FACTORY - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance

The static factory instance

FACTORY - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.PCACorrelationDistance

The static factory instance

FACTORY - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.PreferenceVectorBasedCorrelationDistance

The static factory instance

FACTORY - Static variable in class de.lmu.ifi.dbs.elki.distance.distancevalue.SubspaceDistance

The static factory instance

factory - Variable in class de.lmu.ifi.dbs.elki.distance.similarityfunction.AbstractIndexBasedSimilarityFunction.Parameterizer

The index factory we use.

factory - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizationTask

The factory

FACTORY_METHOD_NAME - Static variable in class de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil

Name for a static "parameterize" factory method.

FACTORY_POSTFIX - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter

failOnErrors() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.AbstractParameterization

Fail on errors, log any error that had occurred.

FAST_SAMPLE_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

Parameter for sample size to be used in fast mode.

fastProjectDataToRenderSpace(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection

fastProjectDataToRenderSpace(NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection

fastProjectDataToRenderSpace(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection1D

Project a data vector from data space to rendering space.

fastProjectDataToRenderSpace(NumberVector<?, ?>) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection1D

Project a data vector from data space to rendering space.

fastProjectDataToRenderSpace(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection2D

Project a data vector from data space to rendering space.

fastProjectDataToRenderSpace(NumberVector<?, ?>) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection2D

Project a data vector from data space to rendering space.

fastProjectDataToRenderSpace(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple1D

fastProjectDataToRenderSpace(NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple1D

fastProjectDataToRenderSpace(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple2D

fastProjectDataToRenderSpace(NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple2D

fastProjectRelativeDataToRenderSpace(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection

fastProjectRelativeDataToRenderSpace(NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection

fastProjectRelativeDataToRenderSpace(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection1D

Project a data vector from data space to rendering space.

fastProjectRelativeDataToRenderSpace(NumberVector<?, ?>) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection1D

Project a data vector from data space to rendering space.

fastProjectRelativeDataToRenderSpace(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection2D

Project a data vector from data space to rendering space.

fastProjectRelativeDataToRenderSpace(NumberVector<?, ?>) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection2D

Project a data vector from data space to rendering space.

fastProjectRelativeDataToRenderSpace(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple1D

fastProjectRelativeDataToRenderSpace(NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple1D

fastProjectRelativeDataToRenderSpace(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple2D

fastProjectRelativeDataToRenderSpace(NumberVector<?, ?>) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple2D

fastProjectRelativeScaledToRender(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection

fastProjectRelativeScaledToRender(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection1D

Project a vector from scaled space to rendering space.

fastProjectRelativeScaledToRender(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection2D

Project a vector from scaled space to rendering space.

fastProjectRelativeScaledToRender(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple1D

fastProjectRelativeScaledToRender(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple2D

fastProjectScaledToRender(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection

fastProjectScaledToRender(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection1D

Project a vector from scaled space to rendering space.

fastProjectScaledToRender(Vector) - Method in interface de.lmu.ifi.dbs.elki.visualization.projections.Projection2D

Project a vector from scaled space to rendering space.

fastProjectScaledToRender(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple1D

fastProjectScaledToRender(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.Simple2D

fc - Variable in class de.lmu.ifi.dbs.elki.gui.configurator.FileParameterConfigurator

The actual file chooser

fc - Variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.FileNameEditor

The actual file chooser

fc - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

The fileChooser on which this panel is installed.

fcomparator - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.PairUtil.Compare

A comparator for type FIRST.

fcomparator - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.PairUtil.CompareSwapped

A comparator for type FIRST.

FCPair<FIRST extends Comparable<? super FIRST>,SECOND> - Class in de.lmu.ifi.dbs.elki.utilities.pairs

Pair that can only be compared by it's first component.

FCPair(FIRST, SECOND) - Constructor for class de.lmu.ifi.dbs.elki.utilities.pairs.FCPair

Initialize pair

FeatureBagging - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.meta

A simple ensemble method called "Feature bagging" for outlier detection.

FeatureBagging(int, int, boolean, Long) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.FeatureBagging

Constructor.

FeatureBagging.Parameterizer - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.meta

Parameterization class.

FeatureBagging.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.FeatureBagging.Parameterizer

FeatureVector<V extends FeatureVector<? extends V,D>,D> - Interface in de.lmu.ifi.dbs.elki.data

Generic FeatureVector class that can contain any type of data (i.e. numerical or categorical attributes).

file - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore

The file to be reparsed

file - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore.Parameterizer

The file to be reparsed

file - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.ExternalNeighborhood.Factory

The input file.

file - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.ExternalNeighborhood.Factory.Parameterizer

The input file.

file - Variable in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile

File to read and write

file - Variable in class de.lmu.ifi.dbs.elki.index.tree.IndexTree

The file storing the entries of this index.

file - Variable in class de.lmu.ifi.dbs.elki.persistent.LRUCache

The underlying file of this cache.

file - Variable in class de.lmu.ifi.dbs.elki.persistent.MemoryPageFile

Holds the pages.

file - Variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Random Access File object.

file - Variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskArrayPageFile

The file storing the pages.

file - Variable in class de.lmu.ifi.dbs.elki.persistent.PersistentPageFile

The file storing the pages.

FILE_EXISTS - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages

File already exists, will not overwrite.

FILE_EXTENSION - Static variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriter

Extension for txt-files.

FILE_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore.Parameterizer

Parameter that specifies the name of the file to be re-parsed.

FILE_ID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexFactory

Optional parameter that specifies the name of the file storing the index.

FILE_NOT_FOUND - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages

File not found. 404.

FILE_VERSION - Static variable in class de.lmu.ifi.dbs.elki.persistent.DefaultPageHeader

Version number of this header (magic number).

FileBasedDatabaseConnection - Class in de.lmu.ifi.dbs.elki.datasource

Provides a file based database connection based on the parser to be set.

FileBasedDatabaseConnection(List<ObjectFilter>, Parser, InputStream) - Constructor for class de.lmu.ifi.dbs.elki.datasource.FileBasedDatabaseConnection

Constructor.

FileBasedDatabaseConnection.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource

Parameterization class.

FileBasedDatabaseConnection.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.FileBasedDatabaseConnection.Parameterizer

FileBasedDoubleDistanceFunction - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.external

Provides a DistanceFunction that is based on double distances given by a distance matrix of an external file.

FileBasedDoubleDistanceFunction(DistanceParser<DoubleDistance>, File) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.external.FileBasedDoubleDistanceFunction

Constructor.

FileBasedDoubleDistanceFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.external

Parameterization class.

FileBasedDoubleDistanceFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.external.FileBasedDoubleDistanceFunction.Parameterizer

FileBasedFloatDistanceFunction - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.external

Provides a DistanceFunction that is based on float distances given by a distance matrix of an external file.

FileBasedFloatDistanceFunction(DistanceParser<FloatDistance>, File) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.external.FileBasedFloatDistanceFunction

Constructor.

FileBasedFloatDistanceFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.external

Parameterization class.

FileBasedFloatDistanceFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.external.FileBasedFloatDistanceFunction.Parameterizer

FileListParameter - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Parameter class for a parameter specifying a list of files.

FileListParameter(OptionID, FileListParameter.FilesType) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileListParameter

Constructs a file list parameter with the given optionID, and file type.

FileListParameter.FilesType - Enum in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Available types of the files: FileListParameter.FilesType.INPUT_FILES denotes input files, FileListParameter.FilesType.OUTPUT_FILES denotes output files.

FileListParameter.FilesType() - Constructor for enum de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileListParameter.FilesType

fileName - Variable in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexFactory

Holds the name of the file storing the index specified by TreeIndexFactory.FILE_ID, null if TreeIndexFactory.FILE_ID is not specified.

fileName - Variable in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexFactory.Parameterizer

filename - Variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

File name.

filename - Variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskArrayPageFile

The file name to use

filename - Variable in class de.lmu.ifi.dbs.elki.result.KMLOutputHandler

Output file name

filename - Variable in class de.lmu.ifi.dbs.elki.result.KMLOutputHandler.Parameterizer

Output file name

fileNameEditor - Variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.AdjustingEditor

The file selector editor

filenameFromLabel(String) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriter

Derive a file name from the cluster label.

filenames - Variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriter

For producing unique filenames.

FileParameter - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Parameter class for a parameter specifying a file.

FileParameter(OptionID, FileParameter.FileType) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileParameter

Constructs a file parameter with the given optionID, and file type.

FileParameter(OptionID, FileParameter.FileType, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileParameter

Constructs a file parameter with the given optionID, file type, and optional flag.

FileParameter.FileType - Enum in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Available file types: FileParameter.FileType.INPUT_FILE denotes an input file, FileParameter.FileType.OUTPUT_FILE denotes an output file.

FileParameter.FileType() - Constructor for enum de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileParameter.FileType

FileParameterConfigurator - Class in de.lmu.ifi.dbs.elki.gui.configurator

Provide a configuration panel to choose a file with a file selector button.

FileParameterConfigurator(FileParameter, JComponent) - Constructor for class de.lmu.ifi.dbs.elki.gui.configurator.FileParameterConfigurator

filesType - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileListParameter

Specifies the type of the files, i.e. if the files are input or output files.

fileType - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileParameter

The file type of this file parameter.

FileUtil - Class in de.lmu.ifi.dbs.elki.utilities

Various static helper methods to deal with files and file names.

FileUtil() - Constructor for class de.lmu.ifi.dbs.elki.utilities.FileUtil

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization.Factory

Fill parameter.

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization.Factory.Parameterizer

Fill parameter.

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization

Fill parameter.

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TreeMBRVisualization.Factory

Fill parameter.

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TreeMBRVisualization.Factory.Parameterizer

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TreeMBRVisualization

Fill parameter.

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TreeSphereVisualization.Factory

Fill parameter.

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TreeSphereVisualization.Factory.Parameterizer

fill - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TreeSphereVisualization

Fill parameter.

FILL_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualization.Factory

Flag for half-transparent filling of bubbles.

FILL_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TreeMBRVisualization.Factory

Flag for half-transparent filling of bubbles.

FILLED_PAGE - Static variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskArrayPageFile

Indicates a filled page.

FILLED_PAGE - Static variable in class de.lmu.ifi.dbs.elki.persistent.PersistentPageFile

Indicates a filled page.

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.AbstractConversionFilter

A standard implementation of the filter process.

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.ClassLabelFilter

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.ExternalIDFilter

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.FilterByLabelFilter

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.FilterNoMissingValuesFilter

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.FixedDBIDsFilter

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.NoOpFilter

filter(MultipleObjectsBundle) - Method in interface de.lmu.ifi.dbs.elki.datasource.filter.ObjectFilter

Filter a set of object packages.

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.ShuffleObjectsFilter

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.SortByLabelFilter

filter(MultipleObjectsBundle) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.SplitNumberVectorFilter

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.CompositeEigenPairFilter

Filters the specified eigenpairs into strong and weak eigenpairs, where strong eigenpairs having high variances and weak eigenpairs having small variances.

filter(SortedEigenPairs) - Method in interface de.lmu.ifi.dbs.elki.math.linearalgebra.pca.EigenPairFilter

Filters the specified eigenpairs into strong and weak eigenpairs, where strong eigenpairs having high variances and weak eigenpairs having small variances.

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FirstNEigenPairFilter

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.LimitEigenPairFilter

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.NormalizingEigenPairFilter

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PercentageEigenPairFilter

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.ProgressiveEigenPairFilter

Filter eigenpairs.

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.RelativeEigenPairFilter

Filter eigenpairs

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.SignificantEigenPairFilter

Filter eigenpairs

filter(SortedEigenPairs) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.WeakEigenPairFilter

Filter eigenpairs

FilterByLabelFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter

A filter to sort the data set by some label.

FilterByLabelFilter(Pattern, boolean) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.FilterByLabelFilter

Constructor.

FilterByLabelFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parameterization class.

FilterByLabelFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.FilterByLabelFilter.Parameterizer

filterClass - Variable in class de.lmu.ifi.dbs.elki.utilities.iterator.TypeFilterIterator

Class restriction

FilteredEigenPairs - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca

Encapsulates weak and strong eigenpairs that have been filtered out by an eigenpair filter.

FilteredEigenPairs(List<EigenPair>, List<EigenPair>) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FilteredEigenPairs

Creates a new object that encapsulates weak and strong eigenpairs that have been filtered out by an eigenpair filter

FilteredLocalPCABasedDistanceFunction<O extends NumberVector<?,?>,P extends FilteredLocalPCAIndex<? super O>,D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.distance.distancefunction

Interface for local PCA based preprocessors.

FilteredLocalPCABasedDistanceFunction.Instance<T extends NumberVector<?,?>,I extends Index,D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.distance.distancefunction

Instance produced by the distance function.

FilteredLocalPCAIndex<NV extends NumberVector<?,?>> - Interface in de.lmu.ifi.dbs.elki.index.preprocessed.localpca

Interface for an index providing local PCA results.

FilteredLocalPCAIndex.Factory<NV extends NumberVector<?,?>,I extends FilteredLocalPCAIndex<NV>> - Interface in de.lmu.ifi.dbs.elki.index.preprocessed.localpca

Factory interface

filteredResults(Result, Class<?>) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

FilterNoMissingValuesFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter

A filter to remove entries that have missing values.

FilterNoMissingValuesFilter() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.FilterNoMissingValuesFilter

Constructor.

FilterNoMissingValuesFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parameterization class.

FilterNoMissingValuesFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.FilterNoMissingValuesFilter.Parameterizer

filterResults(Result, Class<?>) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Return only results of the given restriction class

filters - Variable in class de.lmu.ifi.dbs.elki.datasource.AbstractDatabaseConnection

The filters to invoke

filters - Variable in class de.lmu.ifi.dbs.elki.datasource.AbstractDatabaseConnection.Parameterizer

filters - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.CompositeEigenPairFilter

The filters to be applied.

filters - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.CompositeEigenPairFilter.Parameterizer

The filters to be applied.

FILTERS_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.AbstractDatabaseConnection

Filters to apply to the input data.

filterSingleObject(I) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.AbstractConversionFilter

Normalize a single instance.

filterSingleObject(O) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.AttributeWiseErfNormalization

filterSingleObject(V) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.AttributeWiseMinMaxNormalization

filterSingleObject(V) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.AttributeWiseVarianceNormalization

filterSingleObject(DoubleVector) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.DoubleVectorProjectionFilter

filterSingleObject(DoubleVector) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.DoubleVectorRandomProjectionFilter

filterSingleObject(SparseFloatVector) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.InverseDocumentFrequencyNormalization

filterSingleObject(SparseFloatVector) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorProjectionFilter

filterSingleObject(SparseFloatVector) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorRandomProjectionFilter

filterSingleObject(SparseFloatVector) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.TFIDFNormalization

finalAssignment(List<Pair<V, Set<Integer>>>, Relation<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS

Refinement step to assign the objects to the final clusters.

finalize() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.AbstractParameterization

Upon destruction, report any errors that weren't handled yet.

findAllClassesWithReferences() - Static method in class de.lmu.ifi.dbs.elki.application.internal.DocumentReferences

Fin all classes that have the reference annotation

findAllImplementations(Class<?>, boolean) - Static method in class de.lmu.ifi.dbs.elki.utilities.InspectionUtil

Find all implementations of a given class in the classpath.

findAllImplementations(String[], Class<?>, String[], boolean) - Static method in class de.lmu.ifi.dbs.elki.utilities.InspectionUtil

Find all implementations of a given class.

findBasis(Relation<V>, DistanceQuery<V, DoubleDistance>, ORCLUS<V>.ORCLUSCluster, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS

Finds the basis of the subspace of dimensionality dim for the specified cluster.

findDatabase(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Find the first database result in the tree.

findDBIDColumn(ObjectBundle) - Method in class de.lmu.ifi.dbs.elki.database.StaticArrayDatabase

Find an DBID column.

findDenseSubspaceCandidates(Relation<V>, List<CLIQUESubspace<V>>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE

Determines the k-dimensional dense subspace candidates from the specified (k-1)-dimensional dense subspaces.

findDenseSubspaces(Relation<V>, List<CLIQUESubspace<V>>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE

Determines the k-dimensional dense subspaces and performs a pruning if this option is chosen.

findDimensions(DBIDs, Relation<V>, DistanceQuery<V, DoubleDistance>, RangeQuery<V, DoubleDistance>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS

Determines the set of correlated dimensions for each medoid in the specified medoid set.

findDimensions(List<PROCLUS<V>.PROCLUSCluster>, Relation<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS

Refinement step that determines the set of correlated dimensions for each cluster centroid.

findInsertChild(N, SpatialComparable) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.ApproximateLeastOverlapInsertionStrategy

Returns the path information of the entry of the specified node which needs least overlap enlargement if the given mbr would be inserted into.

findInsertChild(N, SpatialComparable) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.InsertionStrategy

Find the child to insert into.

findInsertChild(N, SpatialComparable) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.LeastOverlapInsertionStrategy

Returns the path information of the entry of the specified node which needs least overlap enlargement if the given mbr would be inserted into.

findMeanModel(Clustering<?>) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.ClusterMeanVisualization.Factory

Test if the given clustering has a mean model.

findMeanModel(Clustering<?>) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.EMClusterVisualization.Factory

Test if the given clustering has a mean model.

findNext() - Method in class de.lmu.ifi.dbs.elki.properties.IterateKnownImplementations

Find the next 'acceptable' result.

findNext() - Method in class de.lmu.ifi.dbs.elki.utilities.InspectionUtil.DirClassIterator

Find the next entry, since we need to skip some jar file entries.

findNext() - Method in class de.lmu.ifi.dbs.elki.utilities.InspectionUtil.JarClassIterator

Find the next entry, since we need to skip some jar file entries.

findOneDimensionalDenseSubspaceCandidates(Relation<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE

Determines the one-dimensional dense subspace candidates by making a pass over the database.

findOneDimensionalDenseSubspaces(Relation<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE

Determines the one dimensional dense subspaces and performs a pruning if this option is chosen.

findOPTICSClustering(Result) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSClusterVisualization

Find the first OPTICS clustering child of a result.

findParent(Relation<V>, DiSHDistanceFunction.Instance<V>, Pair<BitSet, ArrayModifiableDBIDs>, Map<BitSet, List<Pair<BitSet, ArrayModifiableDBIDs>>>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH

Returns the parent of the specified cluster

findPathToObject(IndexTreePath<E>, SpatialComparable, DBID) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Returns the path to the leaf entry in the specified subtree that represents the data object with the specified mbr and id.

findSNNNeighbors(SimilarityQuery<O, IntegerDistance>, DBID) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering

Returns the shared nearest neighbors of the specified query object in the given database.

findSplitpoint(String, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Find the first space before position w or if there is none after w.

findStartingPoint() - Method in class de.lmu.ifi.dbs.elki.math.ConvexHull2D

Find the starting point, and sort it to the beginning of the list.

findSteepAreaResult(ClusterOrderResult<?>) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSSteepAreaVisualization

Find the OPTICS clustering child of a cluster order.

fine(CharSequence, Throwable) - Method in class de.lmu.ifi.dbs.elki.logging.Logging

Log a message at the 'fine' debugging level.

fine(CharSequence) - Method in class de.lmu.ifi.dbs.elki.logging.Logging

Log a message at the 'fine' debugging level.

finer(CharSequence, Throwable) - Method in class de.lmu.ifi.dbs.elki.logging.Logging

Log a message at the 'finer' debugging level.

finer(CharSequence) - Method in class de.lmu.ifi.dbs.elki.logging.Logging

Log a message at the 'finer' debugging level.

finest(CharSequence, Throwable) - Method in class de.lmu.ifi.dbs.elki.logging.Logging

Log a message at the 'finest' debugging level.

finest(CharSequence) - Method in class de.lmu.ifi.dbs.elki.logging.Logging

Log a message at the 'finest' debugging level.

finishGridRow() - Method in class de.lmu.ifi.dbs.elki.gui.configurator.AbstractParameterConfigurator

Complete the current grid row, adding the icon at the end

FiniteProgress - Class in de.lmu.ifi.dbs.elki.logging.progress

A progress object for a given overall number of items to process.

FiniteProgress(String, int) - Constructor for class de.lmu.ifi.dbs.elki.logging.progress.FiniteProgress

Deprecated.

FiniteProgress(String, int, Logging) - Constructor for class de.lmu.ifi.dbs.elki.logging.progress.FiniteProgress

Constructor with auto-reporting to logging.

fireContextChange(ContextChangedEvent) - Method in class de.lmu.ifi.dbs.elki.visualization.VisualizerContext

Trigger a context change event.

fireKNNsInserted(DBIDs, DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor

Informs all registered KNNListener that new kNNs have been inserted and as a result some kNNs have been changed.

fireKNNsRemoved(DBIDs, DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor

Informs all registered KNNListener that existing kNNs have been removed and as a result some kNNs have been changed.

fireObjectInserted(DBID) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Convenience method, calls fireObjectChanged(insertion, DataStoreEvent.Type.INSERT).

fireObjectRemoved(DBID) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Convenience method, calls fireObjectChanged(deletion, DataStoreEvent.Type.DELETE).

fireObjectsChanged(DBIDs, DataStoreEvent.Type) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Handles a DataStoreEvent with the specified type.

fireObjectsInserted(DBIDs) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Convenience method, calls fireObjectsChanged(insertions, DataStoreEvent.Type.INSERT).

fireObjectsRemoved(DBIDs) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Convenience method, calls fireObjectsChanged(deletions, DataStoreEvent.Type.DELETE).

fireObjectsUpdated(DBIDs) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Convenience method, calls fireObjectsChanged(updates, DataStoreEvent.Type.UPDATE).

fireResultAdded(Result, Result) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Informs all registered ResultListener that a new result was added.

fireResultAdded(Result, Result) - Method in class de.lmu.ifi.dbs.elki.result.ResultHierarchy

Informs all registered ResultListener that a new result was added.

fireResultChanged(Result) - Method in class de.lmu.ifi.dbs.elki.result.ResultHierarchy

Informs all registered ResultListener that a result has changed.

fireResultRemoved(Result, Result) - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Informs all registered ResultListener that a new result has been removed.

fireResultRemoved(Result, Result) - Method in class de.lmu.ifi.dbs.elki.result.ResultHierarchy

Informs all registered ResultListener that a new result has been removed.

fireValueChanged() - Method in class de.lmu.ifi.dbs.elki.gui.configurator.AbstractParameterConfigurator

Notify listeners of a changed value.

fireValueChanged() - Method in class de.lmu.ifi.dbs.elki.gui.configurator.ConfiguratorPanel

first - Variable in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBID.Itr

Whether we've already returned our object.

first - Variable in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBIDPair

First value in pair

first - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessEqualGlobalConstraint

First number parameter.

first - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessGlobalConstraint

First number parameter.

first - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair

first value

first - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair

first value

first - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleObjPair

Double value

first - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair

first value

first - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair

first value

first - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair

First value in pair

first - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

First value

firstAssignments - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

The assignments to the first routing object.

firstCoveringRadius - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

The first covering radius.

firstEventReceived - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.OnlineLOF.LOFKNNListener

Holds the first event of one of the both preprocessors.

FirstNEigenPairFilter - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca

The FirstNEigenPairFilter marks the n highest eigenpairs as strong eigenpairs, where n is a user specified number.

FirstNEigenPairFilter(int) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FirstNEigenPairFilter

Constructor.

FirstNEigenPairFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca

Parameterization class.

FirstNEigenPairFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FirstNEigenPairFilter.Parameterizer

FittingFunction - Interface in de.lmu.ifi.dbs.elki.math.linearalgebra.fitting

Interface for a function used in Levenberg-Marquard-Fitting

FittingFunctionResult - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.fitting

Result returned by a fitting function.

FittingFunctionResult(double, double[]) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.FittingFunctionResult

Trivial/generic constructor for the result class

FixedDBIDsFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter

This filter assigns static DBIDs, based on the sequence the objects appear in the bundle by adding a column of DBID type to the bundle.

FixedDBIDsFilter(int) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.FixedDBIDsFilter

Constructor.

FixedDBIDsFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.filter

Parameterization class.

FixedDBIDsFilter.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.FixedDBIDsFilter.Parameterizer

fixedmean - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling

Field storing the fixed mean to use

fixedmean - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling.Parameterizer

FixedSizeByteBufferSerializer<T> - Interface in de.lmu.ifi.dbs.elki.persistent

Serializers with a fixed length serialization.

flag - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ParameterFlagGlobalConstraint

Flag the checking of the parameter constraints is dependent on.

Flag - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters

Option class specifying a flag object.

Flag(OptionID) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag

Constructs a flag object with the given optionID.

FLAG_INTERPOLATED - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.lines.LineStyleLibrary

Meta flag to request an 'interpolated' version of the style

FLAG_STRONG - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.lines.LineStyleLibrary

Meta flag to request a 'stronger' version of the style

FLAG_WEAK - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.lines.LineStyleLibrary

Meta flag to request a 'weaker' version of the style

flagConstraint - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ParameterFlagGlobalConstraint

Indicates at which status of the flag the parameter is to be checked.

FlagParameterConfigurator - Class in de.lmu.ifi.dbs.elki.gui.configurator

Provide a configuration panel to modify a boolean via a checkbox.

FlagParameterConfigurator(Flag, JComponent) - Constructor for class de.lmu.ifi.dbs.elki.gui.configurator.FlagParameterConfigurator

flags - Variable in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters.Node

FlexiHistogram<T,D> - Class in de.lmu.ifi.dbs.elki.math

Histogram with flexible size, guaranteed to be in [bin, 2*bin[

FlexiHistogram(int, FlexiHistogram.Adapter<T, D>) - Constructor for class de.lmu.ifi.dbs.elki.math.FlexiHistogram

Create a new histogram for an unknown data range.

FlexiHistogram.Adapter<T,D> - Class in de.lmu.ifi.dbs.elki.math

Adapter interface to specify bin creation, data caching and combination.

FlexiHistogram.Adapter() - Constructor for class de.lmu.ifi.dbs.elki.math.FlexiHistogram.Adapter

flipSecondEquals(Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.projections.AbstractSimpleProjection

Flip the y axis.

FLOAT_CACHE_MAGIC - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.external.DiskCacheBasedFloatDistanceFunction

Magic to identify double cache matrices

FLOAT_SERIALIZER - Static variable in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil

Static instance.

FLOAT_SIZE - Static variable in class de.lmu.ifi.dbs.elki.application.cache.CacheFloatDistanceInOnDiskMatrix

Storage size: 4 bytes floats

FLOAT_SIZE - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.external.DiskCacheBasedFloatDistanceFunction

Storage required for a float value.

FloatDistance - Class in de.lmu.ifi.dbs.elki.distance.distancevalue

Provides a Distance for a float-valued distance.

FloatDistance() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

Empty constructor for serialization purposes.

FloatDistance(float) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

Constructs a new FloatDistance object that represents the float argument.

floatValue(int) - Method in class de.lmu.ifi.dbs.elki.data.AbstractNumberVector

floatValue() - Method in class de.lmu.ifi.dbs.elki.data.Bit

Provides a float value for the integer representation of this Bit as given by intValue().

floatValue(int) - Method in interface de.lmu.ifi.dbs.elki.data.NumberVector

Returns the value in the specified dimension as float.

floatValue() - Method in class de.lmu.ifi.dbs.elki.data.RationalNumber

Returns the float value of this.doubleValue().

floatValue() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

floatValue() - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance

Get the value as float.

FloatVector - Class in de.lmu.ifi.dbs.elki.data

A FloatVector is to store real values approximately as float values.

FloatVector(float[], boolean) - Constructor for class de.lmu.ifi.dbs.elki.data.FloatVector

Private constructor.

FloatVector(List<Float>) - Constructor for class de.lmu.ifi.dbs.elki.data.FloatVector

Provides a FloatVector consisting of float values according to the given Float values.

FloatVector(float[]) - Constructor for class de.lmu.ifi.dbs.elki.data.FloatVector

Provides a FloatVector consisting of the given float values.

FloatVector(Float[]) - Constructor for class de.lmu.ifi.dbs.elki.data.FloatVector

Provides a FloatVector consisting of the given float values.

FloatVector(Vector) - Constructor for class de.lmu.ifi.dbs.elki.data.FloatVector

Expects a matrix of one column.

FloatVectorLabelParser - Class in de.lmu.ifi.dbs.elki.datasource.parser

Provides a parser for parsing one point per line, attributes separated by whitespace.

FloatVectorLabelParser(Pattern, char, BitSet) - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.FloatVectorLabelParser

Constructor.

FloatVectorLabelParser.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.parser

Parameterization class.

FloatVectorLabelParser.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.datasource.parser.FloatVectorLabelParser.Parameterizer

flush() - Method in class de.lmu.ifi.dbs.elki.gui.util.LogPane.LogPaneHandler

flush() - Method in class de.lmu.ifi.dbs.elki.gui.util.LogPanel.LogPanelHandler

flush() - Method in class de.lmu.ifi.dbs.elki.logging.CLISmartHandler

Flush output streams

flush() - Method in class de.lmu.ifi.dbs.elki.persistent.LRUCache

Flushes this caches by writing any entry to the underlying file.

flush() - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream

Flush output: write inline data, then write comment section.

flushDataStoreEvents() - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

flushDataStoreEvents() - Method in interface de.lmu.ifi.dbs.elki.database.Database

Fires all collected insertion, deletion and update events as one DataStoreEvent, i.e. notifies all registered DataStoreListener how the content of the database has been changed since Database.accumulateDataStoreEvents() has been called.

flushDataStoreEvents() - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEventManager

Fires all collected insertion, deletion or update events as one DataStoreEvent, i.e. notifies all registered DataStoreListener how the content of the database has been changed since DatabaseEventManager.accumulateDataStoreEvents() was called.

fMeasure(int, int, int, double) - Static method in class de.lmu.ifi.dbs.elki.evaluation.paircounting.PairCountingFMeasure

Computes the F-measure of the given parameters.

FMT - Static variable in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Formatter to output numbers in a valid SVG number format.

fmt(double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil

Format a double according to the SVG specs.

FONT_FAMILY - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Font family

fontsize - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TooltipScoreVisualization

Font size to use.

fontsize - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TooltipStringVisualization

Font size to use.

FooKernelFunction - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel

Provides an experimental KernelDistanceFunction for NumberVectors.

FooKernelFunction(int) - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction

Constructor.

FooKernelFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel

Parameterization class.

FooKernelFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction.Parameterizer

forceincomments - Variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream

Force incomments flag

forgetRenderedImage() - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

Free memory used by rendered image.

forgetSynchronizedRunner() - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer

Forget the current update runner.

format(LogRecord) - Method in class de.lmu.ifi.dbs.elki.logging.MessageFormatter

Retrieves the message as it is set in the given LogRecord.

format(NumberFormat, StringBuffer, double, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Helper method for output of equations and solution.

format(double, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double d with the specified fraction digits.

format(double, NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double d with the specified number format.

format(double) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double d with 2 fraction digits.

format(double[], String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double array d with the specified separator.

format(double[], String, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double array d with the specified separator and the specified fraction digits.

format(double[], NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double array d with the specified number format.

format(double[], String, NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double array d with the specified number format.

format(double[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double array d with ',' as separator and 2 fraction digits.

format(double[], int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double array d with ', ' as separator and with the specified fraction digits.

format(double[][]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the double array d with ',' as separator and 2 fraction digits.

format(double[][], String, String, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the array of double arrays d with 'the specified separators and fraction digits.

format(Double[], String, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the Double array f with the specified separator and the specified fraction digits.

format(Double[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the Double array f with ',' as separator and 2 fraction digits.

format(Double[], String, NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the Double array f with the specified separator and the specified fraction digits.

format(Double[], NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the Double array f with ',' as separator and 2 fraction digits.

format(float[], String, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the float array f with the specified separator and the specified fraction digits.

format(float[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the float array f with ',' as separator and 2 fraction digits.

format(int[], String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the int array a for printing purposes.

format(int[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the int array a for printing purposes.

format(Integer[], String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the Integer array a for printing purposes.

format(Integer[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the Integer array a for printing purposes.

format(long[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the long array a for printing purposes.

format(byte[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the byte array a for printing purposes.

format(boolean[], String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the boolean array b with ',' as separator.

format(boolean) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the boolean b.

format(BitSet, int, String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Returns a string representation of the specified bit set.

format(int, BitSet) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Returns a string representation of the specified bit set.

format(Collection<String>, String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the String collection with the specified separator.

format(MatrixLike<?>, int, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Returns a string representation of this matrix.

format(MatrixLike<?>, String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Returns a string representation of this matrix.

format(Matrix, NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

returns String-representation of Matrix.

format(Matrix) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

returns String-representation of Matrix.

format(Vector, NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

returns String-representation of Vector.

format(Vector) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Returns String-representation of Vector.

format(MatrixLike<?>, String, NumberFormat) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Returns a string representation of this matrix.

format(String[], String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats the string array d with the specified separator.

formatCSSClass(CSSClass, int, double, Object...) - Method in class de.lmu.ifi.dbs.elki.visualization.style.lines.DashedLineStyleLibrary

formatCSSClass(CSSClass, int, double, Object...) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.lines.LineStyleLibrary

Add the formatting statements to the given CSS class.

formatCSSClass(CSSClass, int, double, Object...) - Method in class de.lmu.ifi.dbs.elki.visualization.style.lines.SolidLineStyleLibrary

formatForConsole(StringBuffer, int, String, Collection<Pair<Object, Parameter<?, ?>>>) - Static method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionUtil

Format a list of options (and associated owning objects) for console help output.

formats - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog

Supported file format (extensions)

formatSelector - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

formatTimeDelta(long, CharSequence) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Formats a time delta in human readable format.

FormatUtil - Class in de.lmu.ifi.dbs.elki.utilities

Utility methods for output formatting of various number objects

FormatUtil() - Constructor for class de.lmu.ifi.dbs.elki.utilities.FormatUtil

formatValue(double) - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Format value according to the scales resolution (i.e. appropriate number of digits)

forwardOption(Flag) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization

Convenience - add a Flag option directly.

forwardOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization

Convenience - add a Parameter for forwarding

FourC<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.correlation

4C identifies local subgroups of data objects sharing a uniform correlation.

FourC(DoubleDistance, int, LocallyWeightedDistanceFunction<V>, int) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.FourC

Constructor.

FourC.Parameterizer<O extends NumberVector<O,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.correlation

Parameterization class.

FourC.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.FourC.Parameterizer

FourCSubspaceIndex<V extends NumberVector<V,?>,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj

Preprocessor for 4C local dimensionality and locally weighted matrix assignment to objects of a certain database.

FourCSubspaceIndex(Relation<V>, D, DistanceFunction<V, D>, int, PCAFilteredRunner<V>) - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.FourCSubspaceIndex

Full constructor.

FourCSubspaceIndex.Factory<V extends NumberVector<V,?>,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj

Factory class for 4C preprocessors.

FourCSubspaceIndex.Factory(D, DistanceFunction<V, D>, int, PCAFilteredRunner<V>) - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.FourCSubspaceIndex.Factory

Constructor.

FourCSubspaceIndex.Factory.Parameterizer<V extends NumberVector<V,?>,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj

Parameterization class.

FourCSubspaceIndex.Factory.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.FourCSubspaceIndex.Factory.Parameterizer

FractionalSharedNearestNeighborSimilarityFunction<O> - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction

SharedNearestNeighborSimilarityFunction with a pattern defined to accept Strings that define a non-negative Integer.

FractionalSharedNearestNeighborSimilarityFunction(SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>) - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction

Constructor.

FractionalSharedNearestNeighborSimilarityFunction.Instance<T> - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction

Actual instance for a dataset.

FractionalSharedNearestNeighborSimilarityFunction.Instance(Relation<T>, SharedNearestNeighborIndex<T>) - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction.Instance

Constructor.

FractionalSharedNearestNeighborSimilarityFunction.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction

Parameterization class.

FractionalSharedNearestNeighborSimilarityFunction.Parameterizer() - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction.Parameterizer

frame - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

frequentItemsets(Map<BitSet, Integer>, BitSet[], Relation<BitVector>) - Method in class de.lmu.ifi.dbs.elki.algorithm.APRIORI

Returns the frequent BitSets out of the given BitSets with respect to the given database.

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.data.BitVector

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.data.FloatVector

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.data.IntegerVector

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBID.DynamicSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBID.StaticSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.ByteSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.DoubleSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.FloatSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.IntegerSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.LongSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.ShortSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.StringSerializer

fromByteBuffer(ByteBuffer) - Method in class de.lmu.ifi.dbs.elki.persistent.ByteArrayUtil.VarintSerializer

fromByteBuffer(ByteBuffer) - Method in interface de.lmu.ifi.dbs.elki.persistent.ByteBufferSerializer

Deserialize an object from a byte buffer (e.g. disk)

fromDouble(double) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.BitDistance

fromDouble(double) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance

fromDouble(double) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.FloatDistance

fromDouble(double) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance

fromDouble(double) - Method in class de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance

Build a new instance from a double value.

fromIterable(Iterable<C>) - Static method in class de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil

Wrap an Iterable as IterableIterator

fromIterator(Iterator<C>) - Static method in class de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil

Wrap an iterator as Iterable.

fromMinMax(double, double) - Static method in class de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling

Make a linear scaling from a given minimum and maximum.

fulldatabase - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH

The entire database

FullDatabaseReferencePoints<O extends NumberVector<? extends O,?>> - Class in de.lmu.ifi.dbs.elki.utilities.referencepoints

Strategy to use the complete database as reference points.

FullDatabaseReferencePoints() - Constructor for class de.lmu.ifi.dbs.elki.utilities.referencepoints.FullDatabaseReferencePoints

Constructor, Parameterizable style.

func - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod

Function to fit to

function(double[]) - Method in class de.lmu.ifi.dbs.elki.data.ParameterizationFunction

Computes the function value at alpha.

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