S-Index (ELKI: Environment for DeveLoping KDD-Applications Supported by Index-Structures)

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E nvironment for
Deve L oping
K DD-Applications
Supported by I ndex-Structures

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S

s - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow
s - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod
s - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition: Array for internal storage of singular values.
SAMPLE_SIZE_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator: OptionID for DependencyDerivator.SAMPLE_SIZE_PARAM
SAMPLE_SIZE_PARAM - Variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator: Optional parameter to specify the treshold for the size of the random sample to use, must be an integer greater than 0.
sampleMinMax(Database<V>, DistanceFunction<V, D>) - Method in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses
sampleSize - Variable in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator: Holds the value of DependencyDerivator.SAMPLE_SIZE_PARAM.
sampleSize - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD: Variable to store fast mode flag.
samplesize - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints: Holds the value of RandomGeneratedReferencePoints.N_PARAM.
samplesize - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomSampleReferencePoints: Holds the value of RandomSampleReferencePoints.N_PARAM.
sampling - Variable in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses: Sampling
SAMPLING_FLAG - Variable in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses: Flag to enable sampling Key: -diststat.sampling
SAMPLING_ID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses: OptionID for DistanceStatisticsWithClasses.SAMPLING_FLAG
sanitizeName(String) - Static method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass: Return a sanitized version of the given string.
save() - Method in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile: Save the current data to the given file.
saveAsANY(File, int, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Save a file trying to auto-guess the file type.
saveAsEPS(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Transcode file to EPS.
saveAsJPEG(File, int, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Transcode file to JPEG.
saveAsJPEG(File, int, int) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Transcode file to JPEG.
saveAsPDF(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Transcode file to PDF.
saveAsPNG(File, int, int) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Transcode file to PNG.
saveAsPS(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Transcode file to PS.
saveAsSVG(File) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Save document into a SVG file.
saveButton - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow
saveCurrentPlot() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow: Save/export the current plot.
SAVED_SETTINGS_FILENAME - Static variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI: Filename for saved settings
savedCombo - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI: Combo box for saved settings
SavedSettingsFile - Class in de.lmu.ifi.dbs.elki.gui.util: Class to manage saved settings in a text file.
SavedSettingsFile(String) - Constructor for class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile: Constructor.
savedSettingsModel - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI: Model to link the combobox with
SaveOptionsPanel - Class in de.lmu.ifi.dbs.elki.visualization.savedialog: A component (JPanel) which can be displayed in the save dialog to show additional options when saving as JPEG or PNG.
SaveOptionsPanel(JFileChooser, int, int) - Constructor for class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel: Construct a new Save Options Panel.
scalarProduct(BitVector) - Method in class de.lmu.ifi.dbs.elki.data.BitVector: Provides the scalar product (inner product) of this BitVector and the given BitVector.
scalarProduct(DoubleVector) - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector: Provides the scalar product (inner product) of this and the given DoubleVector.
scalarProduct(FloatVector) - Method in class de.lmu.ifi.dbs.elki.data.FloatVector: Provides the scalar product (inner product) of this and the given FloatVector.
scalarProduct(V) - Method in interface de.lmu.ifi.dbs.elki.data.NumberVector: Provides the scalar product (inner product) of this NumberVector of V and the given NumberVector of V.
scalarProduct(SparseFloatVector) - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector: Provides the scalar product (inner product) of this and the given SparseFloatVector.
scalarProduct(int, Matrix, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Returns the scalar product of the colA cols of this and the colB col of B.
scalarProduct(Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector: Returns the scalar product of this vector and the specified vector v.
scale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints: Holds the value of RandomGeneratedReferencePoints.SCALE_PARAM.
scale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints: Holds the value of StarBasedReferencePoints.SCALE_PARAM.
scale - Variable in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot: Scale to use
SCALE - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary: Scaling constant.
SCALE - Static variable in class de.lmu.ifi.dbs.elki.visualization.VisualizationProjection: Scaling constant.
SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints: OptionID for RandomGeneratedReferencePoints.SCALE_PARAM
SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints: OptionID for StarBasedReferencePoints.SCALE_PARAM
SCALE_PARAM - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints: Parameter for additional scaling of the space, to allow out-of-space reference points.
SCALE_PARAM - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints: Parameter to specify the extra scaling of the space, to allow out-of-data-space reference points.
scaleColumn(int, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Scales the specified column with the specified factor.
scaleColumns(double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Scales the columns of this matrix with the specified factor.
Scales - Class in de.lmu.ifi.dbs.elki.visualization.scales: Scales helper class.
Scales() - Constructor for class de.lmu.ifi.dbs.elki.visualization.scales.Scales
scales - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizationProjection: Scales in data set
scaleval - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling: Scaling value, set by MultiplicativeInverseScaling.prepare(de.lmu.ifi.dbs.elki.database.Database, de.lmu.ifi.dbs.elki.result.Result, de.lmu.ifi.dbs.elki.result.outlier.OutlierResult).
scaling - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram: Scaling function to use
scaling - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussStddevWeight: Constant scaling factor of Gaussian distribution.
scaling - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.QuadraticStddevWeight: Scaling: at scaling * stddev the function will hit 0.0
scaling - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer: Scaling function to use for Bubbles
SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram: OptionID for ComputeOutlierHistogram.SCALING_PARAM
SCALING_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer: OptionID for BubbleVisualizer.SCALING_PARAM
SCALING_PARAM - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram: Parameter to specify a scaling function to use.
SCALING_PARAM - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer: Parameter for scaling functions Key: -bubble.scaling
ScalingFunction - Interface in de.lmu.ifi.dbs.elki.utilities.scaling: Interface for scaling functions used by Outlier evaluation such as Histograms and visualization.
scheduleUpdate(Runnable) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Schedule an update.
scomparator - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.PairUtil.Compare: A comparator for type FIRST.
scomparator - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.PairUtil.CompareSwapped: A comparator for type FIRST.
scores - Variable in class de.lmu.ifi.dbs.elki.result.outlier.OutlierResult: Outlier scores.
SCPair<FIRST,SECOND extends Comparable<? super SECOND>> - Class in de.lmu.ifi.dbs.elki.utilities.pairs: Pair that can only be compared by it's second component.
SCPair(FIRST, SECOND) - Constructor for class de.lmu.ifi.dbs.elki.utilities.pairs.SCPair: Initialize pair
SCREEN - Static variable in class de.lmu.ifi.dbs.elki.data.images.BlendComposite: "Screen" blending.
screenheight - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot: Screen size (used for thumbnail sizing)
screenwidth - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot: Screen size (used for thumbnail sizing)
second - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessEqualGlobalConstraint: Second number parameter.
second - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessGlobalConstraint: Second number parameter.
second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair: second value
second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair: second value
second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair: second value
second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair: second value
second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair: Second value in pair
second - Variable in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple: Second value
secondAssignments - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments: The assignments to the second routing object.
secondCoveringRadius - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments: The second covering radius.
SEED_ID - Static variable in class de.lmu.ifi.dbs.elki.database.connection.InputStreamDatabaseConnection: OptionID for InputStreamDatabaseConnection.SEED_PARAM.
SEED_PARAM - Variable in class de.lmu.ifi.dbs.elki.database.connection.InputStreamDatabaseConnection: Parameter to specify a seed for randomly shuffling the rows of the database.
selcss - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot: The CSS class used on "selectable" rectangles.
selected - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel: Selected entry
SELECTED_ATTRIBUTES_ID - Static variable in class de.lmu.ifi.dbs.elki.parser.meta.ProjectionParser: ID for the parameter ProjectionParser.SELECTED_ATTRIBUTES_PARAM.
SELECTED_ATTRIBUTES_PARAM - Variable in class de.lmu.ifi.dbs.elki.parser.meta.ProjectionParser: Selected attributes parameter.
selectedAttributes - Variable in class de.lmu.ifi.dbs.elki.parser.meta.ProjectionParser: Keeps the selection of the subspace to project onto.
selectionMatrixOfStrongEigenvectors() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult: Returns a copy of the selection matrix of the strong eigenvectors (E_czech) of this LocalPCA.
selectionMatrixOfWeakEigenvectors() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult: Returns a copy of the selection matrix of the weak eigenvectors (E_hat) of the object to which this PCA belongs to.
selectivity(double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique.CLIQUEUnit: Returns the selectivity of this unit, which is defined as the fraction of total feature vectors contained in this unit.
SEPARATOR - Static variable in class de.lmu.ifi.dbs.elki.distance.CorrelationDistance: The component separator used by correlation distances.
SEPARATOR - Static variable in class de.lmu.ifi.dbs.elki.distance.SubspaceDistance: Indicates a separator.
SEPARATOR - Static variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream: String to separate different entries while printing.
separatorPattern - Variable in class de.lmu.ifi.dbs.elki.data.HierarchicalClassLabel: Holds the Pattern to separate different levels parsing input.
separatorString - Variable in class de.lmu.ifi.dbs.elki.data.HierarchicalClassLabel: A String to separate different levels in a String representation of this HierarchicalClassLabel.
SequentialDatabase<O extends DatabaseObject> - Class in de.lmu.ifi.dbs.elki.database: SequentialDatabase is a simple implementation of a Database.
SequentialDatabase() - Constructor for class de.lmu.ifi.dbs.elki.database.SequentialDatabase: Provides a database for main memory holding all objects in a hashtable.
SER_MARKER - Static variable in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream: Marker used in text serialization (and re-parsing)
serialize(StringBuffer) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager: Serialize managed CSS classes to rule file.
SerializedParameterization - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization: Manage a parameterization serialized as String array, e.g. from command line.
SerializedParameterization() - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization: Constructor
SerializedParameterization(String[]) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization: Constructor
SerializedParameterization(List<String>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization: Constructor
serializeParameters() - Method in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters: Serialize parameters into an array list to pass to setParameters()
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.algorithm.AbortException: Serial UID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval: Serial version number
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow.SeriesLabelRenderer: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.data.Bit: Generated serial version UID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.data.RationalNumber: Generated serial version UID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.database.AssociationID: The serial version UID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.database.DatabaseEvent: Serialization ID since Java EventObjects are expected to be serializable.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.BitDistance: Generated serial version UID
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.CorrelationDistance: Generated SerialVersionUID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.PCACorrelationDistance: Serial
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.DoubleDistance: Generated serialVersionUID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.FloatDistance: Generated serialVersionUID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.IntegerDistance: Created serial version UID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.PreferenceVectorBasedCorrelationDistance
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.distance.SubspaceDistance: Serial version number.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.LogPane: Serialization version number
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.LogPanel: Serial
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.AdjustingEditor: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ColorfolRenderer: Serial Version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.DropdownEditor: Serial Version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.FileNameEditor: Serial version number
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTreeNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.PolynomialApproximation
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ApproximationLine
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTreeNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTreeNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabTreeNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree.MTreeNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.util.PQNode: Generated serialVersionUID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar.RStarTreeNode
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord: Serial Version UID
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.logging.progress.ProgressLogRecord: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.QRDecomposition: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector: Serial version
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.normalization.NonNumericFeaturesException: Generated serial version UID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.persistent.AbstractPage
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray: Serial version.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.persistent.OnDiskUpperTriangleMatrix: Serial number, also used for generating a magic
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.properties.PropertyName: Serial version UID
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.AnyMap: Serial version.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.HashMapList: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.heap.Deap
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeap: Serial version number.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultIdentifiable
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap: Serial version number.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap: Serial version number.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.HyperBoundingBox: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.utilities.ModifiableHyperBoundingBox: Serial version
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.InternalParameterizationErrors: Serial version ID
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.NoParameterValueException: Serial version UID
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnspecifiedParameterException: Serial UID
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException: Generated serial version UID.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas: Serial version number.
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.visualization.css.CSSClass.InvalidCSS: Serial version UID.
serialVersionUID - Static variable in exception de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict: Serial version UID
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager: Serial version.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotMap: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.SubplotSelectedEvent: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow: Serial version
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel: Serial version.
serialVersionUID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext: Serial version.
SERIESID - Static variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow: SVG graph object ID (for replacing)
SERIESID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.CurveVisualizer: SVG class name for plot line
SERIESID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.HistogramVisualizer: CSS class name for the series.
seriesList - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow
set(int, int, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Set a single element.
set(int, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector: Sets the value at the specified row.
set - Variable in class de.lmu.ifi.dbs.elki.utilities.InspectionUtil.DirClassIterator
SET - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag: Constant indicating that the flag is set.
setAssociation(AssociationID<M>, M) - Method in class de.lmu.ifi.dbs.elki.result.MultiResult: Put meta data.
setAssociations(Integer, Associations) - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase: Sets the specified association to the specified id.
setAtt(Element, String, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Set a SVG attribute
setAtt(Element, String, int) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Set a SVG attribute
setAtt(Element, String, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Set a SVG attribute
setBits() - Method in class de.lmu.ifi.dbs.elki.data.BitVector: Returns the indices of all set bits.
setCached(String, String, T) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary: Set a cache value
setCacheIndex(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.Deap: Sets the index of this deap in the cachePath of the persistent heap.
setCacheSize(int) - Method in interface de.lmu.ifi.dbs.elki.persistent.Cache: Sets the maximum size of this cache.
setCacheSize(int) - Method in class de.lmu.ifi.dbs.elki.persistent.LRUCache: Sets the maximum size of this cache.
setCacheSize(int) - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile: Sets the maximum size of the cache of this file.
setCentroid(V) - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationModel: Assign new Centroid
setClipping(Vector, Vector) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster: Set a clipping box. min needs to be smaller than max in each component.
setColumn(int, Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Sets the jth column of this matrix to the specified column.
setCompleted() - Method in class de.lmu.ifi.dbs.elki.logging.progress.IndefiniteProgress: Set the completion flag.
setConservativeKnnDistanceApproximation(ApproximationLine) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPDirectoryEntry: Sets the conservative approximation line
setConservativeKnnDistanceApproximation(ApproximationLine) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPEntry: Sets the conservative approximation line
setConservativeKnnDistanceApproximation(ApproximationLine) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry: Sets the conservative approximation line
setCovarianceMatrix(Matrix) - Method in class de.lmu.ifi.dbs.elki.data.model.EMModel
setCovarianceMatrixBuilder(CovarianceMatrixBuilder<V, D>) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCARunner: Set covariance matrix builder.
setCoveringRadius(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry: Sets the covering radius of this entry.
setCoveringRadius(D) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry: Sets the covering radius of this entry if this entry is a directory entry, throws an UnsupportedOperationException otherwise.
setCoveringRadius(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry: Throws an UnsupportedOperationException, since a leaf entry has no covering radius.
setCSSClass(Element, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Set the CSS class of an Element.
setCurrent(IntIntPair) - Method in class de.lmu.ifi.dbs.elki.evaluation.paircounting.generator.PairSortedGenerator: Set the current pair.
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.distance.AbstractMeasurementFunction
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractLocallyWeightedDistanceFunction
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractPreprocessorBasedDistanceFunction: Calls AbstractMeasurementFunction.setDatabase(de.lmu.ifi.dbs.elki.database.Database) and runs the preprocessor on the database.
setDatabase(Database<V>) - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterAbstract
setDatabase(Database<V>) - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.KernelBasedLocallyWeightedDistanceFunction
setDatabase(Database<O>) - Method in interface de.lmu.ifi.dbs.elki.distance.MeasurementFunction: Set the database that holds the associations for the DatabaseObject for which the measurements should be computed.
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.AbstractPreprocessorBasedSimilarityFunction: Calls AbstractMeasurementFunction.setDatabase(de.lmu.ifi.dbs.elki.database.Database) and runs the preprocessor on the database.
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.ArbitraryKernelFunctionWrapper
setDatabase(Database<O>) - Method in interface de.lmu.ifi.dbs.elki.index.Index: Sets the database in the distance function of this index (if existing).
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTree: Sets the database in the distance function of this index.
setDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialIndex: Sets the database in the distance function of this index (if existing).
setDefaultValue(T) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter: Sets the default value of this parameter.
setDensityCorrection(double) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster: Set density correction factor.
setDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID: Sets the description of this OptionID.
setDimension(int) - Method in class de.lmu.ifi.dbs.elki.data.model.DimensionModel: Set cluster dimensionality
setDimensionality(int) - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector: Sets the dimensionality to the new value.
setDirty(boolean) - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractPage: Sets the dirty flag of this page.
setDirty(boolean) - Method in interface de.lmu.ifi.dbs.elki.persistent.Page: Sets the dirty flag of this page.
setDirty(boolean) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.Deap: Sets the dirty flag of this page.
setDisableInteractions(boolean) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Disable Batik predefined interactions.
setDiscarded(int) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic: Notify cluster of discarded points.
setDistance(D) - Method in class de.lmu.ifi.dbs.elki.database.DistanceResultPair: Setter for first
setDocument(Document) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas: Deprecated. Document cannot be synchronized - use JSVGSynchronizedCanvas.setPlot(de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot) and a SVGPlot object!
setEmptyPagesSize(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader: Set the size required by the listing of empty pages.
setExpanded(SpatialEntry, SpatialEntry) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTree: Marks the nodes with the specified ids as expanded.
setFile(PageFile<P>) - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractPage: Sets the page file of this page.
setFile(PageFile<P>) - Method in interface de.lmu.ifi.dbs.elki.persistent.Page: Sets the page file of this page.
setFile(PageFile<Deap<K, V>>) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.Deap: Sets the page file of this page.
setFirst(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair: Set first value
setFirst(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair: Set first value
setFirst(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair: Set first value
setFirst(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair: Set first value
setFirst(FIRST) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair: Setter for first
setFirst(FIRST) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple: Setter for first
setForceincomments(boolean) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream: Set the force-in-comments flag.
setFormat(String) - Method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
setGlobalAssociation(MultiResult, AssociationID<M>, M) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil: Deprecated.
setGroup(DatabaseObjectGroup) - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster: Access group object
setGzipCompression(boolean) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.MultipleFilesOutput: Set GZIP compression flag.
setHandled(O) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTree: Marks the specified object as handled and returns the path of node ids from the root to the objects's parent.
setHasHandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluDirectoryEntry
setHasHandled(boolean) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluEntry: Sets the flag to marks the node (or its child nodes) which is represented by this entry to contain handled data objects.
setHasHandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluLeafEntry
setHasUnhandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluDirectoryEntry
setHasUnhandled(boolean) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluEntry: Sets the flag to marks the node (or its child nodes) which is represented by this entry to contain unhandled data objects.
setHasUnhandled(boolean) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluLeafEntry
setHeight(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree: Sets the height of this R*-Tree.
setHierarchy(HierarchyImplementation<Cluster<M>>) - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster: Set hierarchy object
setID(Integer) - Method in class de.lmu.ifi.dbs.elki.data.AbstractDatabaseObject
setID(Integer) - Method in interface de.lmu.ifi.dbs.elki.data.DatabaseObject: Sets the id of this database object.
setID(Integer) - Method in class de.lmu.ifi.dbs.elki.database.DistanceResultPair: Setter for second
setID(Integer) - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractEntry: Sets the id of the node or data object that is represented by this entry.
setID(Integer) - Method in interface de.lmu.ifi.dbs.elki.index.tree.Entry: Sets the id of the node or data object that is represented by this entry.
setID(int) - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractPage: Sets the unique id of this Page.
setID(int) - Method in interface de.lmu.ifi.dbs.elki.persistent.Page: Sets the unique id of this Page.
setID(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.Deap: Sets the unique id of this Page.
setInvertedRows(int[]) - Method in class de.lmu.ifi.dbs.elki.data.model.BiclusterWithInverted: Sets the ids of the inverted rows.
setKey(K) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeapNode: Sets the key of this HeapNode.
setKey(K) - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.HeapNode: Sets the key of this HeapNode.
setKnnDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxDirectoryEntry
setKnnDistance(D) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxEntry: Sets the knn distance of the entry.
setKnnDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxLeafEntry
setKnnDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNDirectoryEntry
setKnnDistance(D) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNEntry: Sets the knn distance of this entry.
setKnnDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNLeafEntry
setKnnDistanceApproximation(PolynomialApproximation) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppDirectoryEntry: Sets the polynomial approximation.
setKnnDistanceApproximation(PolynomialApproximation) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppEntry: Sets the polynomial approximation.
setKnnDistanceApproximation(PolynomialApproximation) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppLeafEntry: Sets the polynomial approximation.
setKnnDistances(List<D>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabDirectoryEntry
setKnnDistances(List<D>) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabEntry: Sets the knn distances of the entry.
setKnnDistances(List<D>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabLeafEntry
setLes(LinearEquationSystem) - Method in class de.lmu.ifi.dbs.elki.data.model.LinearEquationModel: Assign new Linear Equation System.
setLevel(int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualizer: Convenience method to update the visualizer level.
setLevelFor(String, String) - Static method in class de.lmu.ifi.dbs.elki.logging.LoggingConfiguration: Set the logging level for a particular package/class.
setMatrix(int, int, int, int, Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Set a submatrix.
setMatrix(int[], int[], Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Set a submatrix.
setMatrix(int[], int, int, Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Set a submatrix.
setMatrix(int, int, int[], Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Set a submatrix.
setMax(int, double) - Method in class de.lmu.ifi.dbs.elki.utilities.ModifiableHyperBoundingBox: Set the maximum bound in dimension dimension to value value.
setMBR(HyperBoundingBox) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry: Sets the MBR of this entry.
setMBR(HyperBoundingBox) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry: Sets the MBR of this entry.
setMBR(HyperBoundingBox) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry: Throws an UnsupportedOperationException
setMean(V) - Method in class de.lmu.ifi.dbs.elki.data.model.MeanModel
setMin(int, double) - Method in class de.lmu.ifi.dbs.elki.utilities.ModifiableHyperBoundingBox: Set the minimum bound in dimension dimension to value value.
setModel(M) - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster: Access model object
setMultiple(boolean) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.ByLabelClustering: Sets the multiple flag to indicate that a multiple cluster assignment is possible.
setName(String) - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster: Set Cluster name
setName(String) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass: Set the class name.
setNewID(O) - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase: Provides a new id for the specified database object suitable as key for a new insertion and sets this id in the specified database object.
setNextPageID(int) - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile: Sets the next page id.
setNextPageID(int) - Method in class de.lmu.ifi.dbs.elki.persistent.PersistentPageFile: Set the next page id to the given value.
setNoise(boolean) - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster: Setter for noise flag.
setNormalization(Normalization<O>) - Method in class de.lmu.ifi.dbs.elki.result.DiscardResultHandler: Set normalization
setNormalization(Normalization<O>) - Method in interface de.lmu.ifi.dbs.elki.result.ResultHandler: Setter for normalization
setNormalization(Normalization<O>) - Method in class de.lmu.ifi.dbs.elki.result.ResultWriter
setNormalization(Normalization<O>) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriter: Setter for normalization
setNormalization(Normalization<O>) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStreamNormalizing: Setter for normalization.
setNormalization(Normalization<DatabaseObject>) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultVisualizer
setOptional(boolean) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter: Specifies if this parameter is an optional parameter.
setPageID(P) - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile: Sets the id of the given page.
setParentDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry: Sets the distance from the object to its parent object.
setParentDistance(D) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry: Sets the distance from the routing object to routing object of its parent.
setParentDistance(D) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry: Sets the distance from the underlying data object to its parent's routing object.
setPCAResult(PCAFilteredResult) - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationModel: Assign new PCA result
setPlot(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas: Choose a new plot to display.
setPoints(LinkedList<Vector>) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster: Set the list of points in the cluster
setProcessed(int) - Method in class de.lmu.ifi.dbs.elki.logging.progress.AbstractProgress: Sets the number of items already processed at a time being.
setProcessed(int) - Method in class de.lmu.ifi.dbs.elki.logging.progress.FiniteProgress: Sets the number of items already processed at a time being.
setProgressiveKnnDistanceApproximation(ApproximationLine) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry: Sets the progressive approximation line
setRoutingObjectID(Integer) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry: Sets the id of the routing object of this entry.
setRoutingObjectID(Integer) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry: Sets the id of the underlying database object of this entry, if this entry is a leaf entry, the id of the routing object, otherwise.
setRoutingObjectID(Integer) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry: Sets the id of the underlying data object of this entry.
setSecond(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair: Set second value
setSecond(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair: Set second value
setSecond(double) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair: Set second value
setSecond(int) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair: Set second value
setSecond(SECOND) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair: Setter for second
setSecond(SECOND) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple: Setter for second
setSelectedAttributes(BitSet) - Method in class de.lmu.ifi.dbs.elki.parser.meta.ProjectionParser: Sets the bits set to true in the given BitSet as selected attributes in ProjectionParser.SELECTED_ATTRIBUTES_PARAM.
setSelectedDimensions(BitSet) - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractDimensionsSelectingDoubleDistanceFunction: Sets the selected dimensions according to the set bits in the given BitSet.
setSelectedItem(Object) - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel
setShortDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter: Sets the short description of the option.
setSourceClassName(String) - Method in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord
setSourceMethodName(String) - Method in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord
setStatement(String, String) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass: Set a CSS statement.
setStatement(String, int) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass: Set a CSS statement.
setStatement(String, double) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass: Set a CSS statement.
setStyle(Element, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Set a SVG style attribute
setStyleLibrary(StyleLibrary) - Method in interface de.lmu.ifi.dbs.elki.visualization.svg.MarkerLibrary: Set the style library for this marker library.
setStyleLibrary(StyleLibrary) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.MinimalMarkers
setStyleLibrary(StyleLibrary) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.PrettyMarkers
setSVGDocument(SVGDocument) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas: Deprecated. Document cannot be synchronized - use JSVGSynchronizedCanvas.setPlot(de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot) and a SVGPlot object!
setSynchronizedRunner(JSVGUpdateSynchronizer.JSVGSynchronizedRunner) - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer: Set the current update runner
setTestAgainstModel(boolean) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorMain: Set the value of the GeneratorMain.testAgainstModel flag
setThird(THIRD) - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple: Setter for third
setTime(boolean) - Method in class de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm
setTime(boolean) - Method in interface de.lmu.ifi.dbs.elki.algorithm.Algorithm: Sets whether whether the time should be assessed while executing the algorithm.
setTime(boolean) - Method in class de.lmu.ifi.dbs.elki.algorithm.MetaMultiAlgorithm: Sets whether whether the time should be assessed while executing the algorithm.
settings - Variable in class de.lmu.ifi.dbs.elki.KDDTask: The settings used, for settings reporting.
settings - Variable in class de.lmu.ifi.dbs.elki.result.SettingsResult: Settings storage.
SettingsResult - Class in de.lmu.ifi.dbs.elki.result: Result that keeps track of settings that were used in generating this particular result.
SettingsResult(Collection<Pair<Object, Parameter<?, ?>>>) - Constructor for class de.lmu.ifi.dbs.elki.result.SettingsResult: Constructor.
settingsVisualizer - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.DefaultAdapter: Visualizer to show the settings.
SettingsVisualizer - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj: Pseudo-Visualizer, that lists the settings of the algorithm-
SettingsVisualizer() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.SettingsVisualizer: Constructor, Parameterizable style - does nothing.
setupCanvas(SVGPlot, VisualizationProjection, double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.Projection2DVisualizer: Utility function to setup a canvas element for the visualization.
setupCSS(SVGPlot, int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis1d.Projection1DHistogramVisualizer: Generate the needed CSS classes.
setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer: Registers the Bubble-CSS-Class at a SVGPlot.
setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.ReferencePointsVisualizer: Registers the Reference-Point-CSS-Class at a SVGPlot.
setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TooltipVisualizer: Registers the Tooltip-CSS-Class at a SVGPlot.
setupCSS(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.CurveVisualizer: Setup the CSS classes for the plot.
setupCSSClasses(Object, CSSClassManager, StyleLibrary) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis: Register CSS classes with a CSSClassManager
setupHoverer() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot: Setup the CSS hover effect.
setValue(Bit) - Method in class de.lmu.ifi.dbs.elki.distance.BitDistance
setValue(Double) - Method in class de.lmu.ifi.dbs.elki.distance.DoubleDistance
setValue(Float) - Method in class de.lmu.ifi.dbs.elki.distance.FloatDistance
setValue(Integer) - Method in class de.lmu.ifi.dbs.elki.distance.IntegerDistance
setValue(N) - Method in class de.lmu.ifi.dbs.elki.distance.NumberDistance: Sets the value of this NumberDistance.
setValue(Object) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ColorfolRenderer
setValue(V) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeapNode: Sets the value of this HeapNode.
setValue(V) - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.HeapNode: Sets the value of this HeapNode.
setValue(boolean) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag: Convenience function using a native boolean, that doesn't require error handling.
setValue(Object) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter: Sets the value of the option.
setValue(Object) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter: Sets the value of the option.
setValueAt(Object, int, int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.AbstractParameterization: Perform the actual parameter assignment.
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ChainedParameterization
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.EmptyParameterization
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.MergedParameterization
setValueForOption(Parameter<?, ?>) - Method in interface de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization: Assign a value for an option, but not using default values and throwing exceptions on error.
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters
setValueForOption(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.UnParameterization
setValueInternal(T) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter: Internal setter for the value.
setVerbose(boolean) - Method in class de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm
setVerbose(boolean) - Method in interface de.lmu.ifi.dbs.elki.algorithm.Algorithm: Sets whether verbose messages should be printed while executing the algorithm.
setVerbose(boolean) - Method in class de.lmu.ifi.dbs.elki.algorithm.MetaMultiAlgorithm: Sets whether verbose messages should be printed while executing the algorithm.
setVerbose(boolean) - Static method in class de.lmu.ifi.dbs.elki.logging.LoggingConfiguration: Reconfigure logging to enable 'verbose' logging at the top level.
SHARED_NEAREST_NEIGHBORS_SET - Static variable in class de.lmu.ifi.dbs.elki.database.AssociationID: The association id to associate a set of neighbors for use of the shared nearest neighbor similarity function.
SharedNearestNeighborSimilarityFunction<O extends DatabaseObject,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.distance.similarityfunction: SharedNearestNeighborSimilarityFunction with a pattern defined to accept Strings that define a non-negative Integer.
SharedNearestNeighborSimilarityFunction(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction: Constructor, adhering to Parameterizable
SharedNearestNeighborsPreprocessor<O extends DatabaseObject,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.preprocessing: A preprocessor for annotation of the ids of nearest neighbors to each database object.
SharedNearestNeighborsPreprocessor(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.preprocessing.SharedNearestNeighborsPreprocessor: Constructor, adhering to Parameterizable
shift - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling: Shift
shortDescription - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter: The short description of the option.
shortValue(int) - Method in class de.lmu.ifi.dbs.elki.data.AbstractNumberVector
shortValue(int) - Method in interface de.lmu.ifi.dbs.elki.data.NumberVector: Returns the value in the specified dimension as short.
shortValue() - Method in class de.lmu.ifi.dbs.elki.data.RationalNumber: Returns the short value of this.doubleValue().
shortValue() - Method in class de.lmu.ifi.dbs.elki.distance.NumberDistance: Get the value as short.
showError(Component, String, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog: Helper method to show a error message as "popup".
showOverview() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow: Navigate to the overview plot.
showPlot(SVGPlot) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow: Navigate to a particular plot.
showSaveDialog(SVGPlot, int, int) - Static method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog: Show a "Save as" dialog.
showSubplot(SubplotSelectedEvent) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow: Navigate to a subplot.
shrinkCache() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap: Shrinks the cache, i.e. removes the last deap from the cache.
shrinkHeap(TreeSet<FCPair<Double, Integer>>, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses
shutdown - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot.ThumbnailThread: Flag to signal shutdown.
SignificantEigenPairFilter - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca: The SignificantEigenPairFilter sorts the eigenpairs in descending order of their eigenvalues and chooses the contrast of an Eigenvalue to the remaining Eigenvalues is maximal.
SignificantEigenPairFilter(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.SignificantEigenPairFilter: Constructor, adhering to Parameterizable
similarity(Integer, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.AbstractSimilarityFunction
similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.AbstractSimilarityFunction
similarity(Integer, Integer) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction
similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction
similarity(Integer, Integer) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.AbstractKernelFunction
similarity(Integer, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.AbstractKernelFunction
similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.ArbitraryKernelFunctionWrapper: Provides a wrapper for arbitrary kernel functions whose kernel matrix has already been precomputed.
similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction: Provides an experimental kernel similarity between the given two vectors.
similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.LinearKernelFunction: Provides a linear Kernel function that computes a similarity between the two feature vectors V1 and V2 definded by V1^T*V2
similarity(O, O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.PolynomialKernelFunction: Provides the linear kernel similarity between the given two vectors.
similarity(Integer, Integer) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction
similarity(Integer, Integer) - Method in interface de.lmu.ifi.dbs.elki.distance.similarityfunction.SimilarityFunction: Returns the similarity between the two objects specified by their object ids.
similarity(Integer, O) - Method in interface de.lmu.ifi.dbs.elki.distance.similarityfunction.SimilarityFunction: Returns the similarity between the two specified objects.
similarity(O, O) - Method in interface de.lmu.ifi.dbs.elki.distance.similarityfunction.SimilarityFunction: Computes the similarity between two given DatabaseObjects according to this similarity function.
SIMILARITY_FUNCTION_ID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterAbstract: OptionID for SimilarityAdapterAbstract.SIMILARITY_FUNCTION_PARAM
SIMILARITY_FUNCTION_PARAM - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterAbstract: Parameter to specify the similarity function to derive the distance between database objects from.
SimilarityAdapterAbstract<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter: Adapter from a normalized similarity function to a distance function.
SimilarityAdapterAbstract(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterAbstract: Constructor, adhering to Parameterizable
SimilarityAdapterArccos<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter: Adapter from a normalized similarity function to a distance function using arccos(sim).
SimilarityAdapterArccos(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterArccos: Constructor.
SimilarityAdapterLinear<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter: Adapter from a normalized similarity function to a distance function using 1 - sim.
SimilarityAdapterLinear(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLinear: Constructor.
SimilarityAdapterLn<V extends NumberVector<V,?>> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.adapter: Adapter from a normalized similarity function to a distance function using -log(sim).
SimilarityAdapterLn(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLn: Constructor.
similarityFunction - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering: The similarity function for the shared nearest neighbor similarity.
similarityFunction - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD: The similarity function.
similarityFunction - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterAbstract: Holds the similarity function.
SimilarityFunction<O extends DatabaseObject,D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.distance.similarityfunction: Interface SimilarityFunction describes the requirements of any similarity function.
similarityMatrix - Variable in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution: The similarity matrix of the pca.
similarityMatrix() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult: Returns a copy of the similarity matrix (M_hat) of this LocalPCA.
SimpleClassLabel - Class in de.lmu.ifi.dbs.elki.data: A simple class label casting a String as it is as label.
SimpleClassLabel() - Constructor for class de.lmu.ifi.dbs.elki.data.SimpleClassLabel
SimpleEnumeratingScheme - Class in de.lmu.ifi.dbs.elki.data.cluster.naming: Simple enumerating naming scheme.
SimpleEnumeratingScheme(Clustering<?>) - Constructor for class de.lmu.ifi.dbs.elki.data.cluster.naming.SimpleEnumeratingScheme: Constructor.
SimpleHierarchy<C extends HierarchyInterface<C>> - Class in de.lmu.ifi.dbs.elki.data.cluster: Hierarchy implementation with a per-object representation.
SimpleHierarchy(C, List<C>, List<C>) - Constructor for class de.lmu.ifi.dbs.elki.data.cluster.SimpleHierarchy: Constructor for hierarchy object.
simulateParameters(double[]) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod: Compute new chisquared error This function also modifies the alpha and beta matrixes!
singleAssignment(Database<O>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.ByLabelClustering: Assigns the objects of the database to single clusters according to their labels.
SingleStreamOutput - Class in de.lmu.ifi.dbs.elki.result.textwriter: Class to output all result data to a single stream (e.g.
SingleStreamOutput() - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor using stdout.
SingleStreamOutput(boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor using stdout
SingleStreamOutput(File) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor with given file name.
SingleStreamOutput(File, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor with given file name.
SingleStreamOutput(FileDescriptor) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor with given FileDescriptor
SingleStreamOutput(FileDescriptor, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor with given FileDescriptor
SingleStreamOutput(FileOutputStream) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor with given FileOutputStream.
SingleStreamOutput(FileOutputStream, boolean) - Constructor for class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Constructor with given FileOutputStream.
SINGULARITY_CHEAT - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.EM: Small value to increment diagonally of a matrix in order to avoid singularity before building the inverse.
SINGULARITY_CHEAT - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianUniformMixture: Small value to increment diagonally of a matrix in order to avoid singularity before building the inverse.
SingularValueDecomposition - Class in de.lmu.ifi.dbs.elki.math.linearalgebra: Singular Value Decomposition.
SingularValueDecomposition(Matrix) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition: Construct the singular value decomposition
sinusProduct(int, int, double[]) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH: Computes the product of all sinus values of the specified angles from start to end index.
sinusProduct(int, int, double[]) - Method in class de.lmu.ifi.dbs.elki.data.ParameterizationFunction: Computes the product of all sinus values of the specified angles from start to end index.
size() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster: Delegate to database object group.
size() - Method in interface de.lmu.ifi.dbs.elki.data.DatabaseObjectGroup: Retrieve the collection / data size.
size() - Method in class de.lmu.ifi.dbs.elki.data.DatabaseObjectGroupArray: Return the backing array length.
size() - Method in class de.lmu.ifi.dbs.elki.data.DatabaseObjectGroupCollection: Return the backing collections size.
size() - Method in class de.lmu.ifi.dbs.elki.data.KNNList: Returns the current size of this list.
size() - Method in class de.lmu.ifi.dbs.elki.data.model.Bicluster: The size of the cluster.
size - Variable in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster: Number of points in the cluster (-> density)
size() - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase
size() - Method in interface de.lmu.ifi.dbs.elki.database.Database: Returns the number of objects contained in this Database.
size() - Method in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters: Get the size
size() - Method in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile: Return number of saved settings profiles.
SIZE - Static variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.MkTreeHeader: The size of this header in Bytes, which is 4 Bytes (for MkTreeHeader.k_max).
size() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.MkTreeHeader: Returns TreeIndexHeader.size() plus the value of MkTreeHeader.SIZE).
SIZE - Static variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTreeHeader: The size of this header in Bytes, which is 4 Bytes (for RdKNNTreeHeader.k_max).
size() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTreeHeader: Returns TreeIndexHeader.size() plus the value of RdKNNTreeHeader.SIZE).
SIZE - Static variable in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader: The size of this header in Bytes, which is 20 Bytes ( 4 Bytes for TreeIndexHeader.dirCapacity, TreeIndexHeader.leafCapacity, TreeIndexHeader.dirMinimum, TreeIndexHeader.leafMinimum, and TreeIndexHeader.emptyPagesSize).
size() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader: Returns DefaultPageHeader.size() plus the value of TreeIndexHeader.SIZE).
size() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs: Returns the number of the eigenpairs.
size - Variable in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram: Size of array storage.
size() - Method in class de.lmu.ifi.dbs.elki.parser.ParsingResult: Provides the number of objects listed in this parsing result.
SIZE - Static variable in class de.lmu.ifi.dbs.elki.persistent.DefaultPageHeader: The size of this header in Bytes, which is 8 Bytes ( 4 Bytes for DefaultPageHeader.FILE_VERSION and 4 Bytes for DefaultPageHeader.pageSize).
size() - Method in class de.lmu.ifi.dbs.elki.persistent.DefaultPageHeader: Returns the value of DefaultPageHeader.SIZE).
size() - Method in interface de.lmu.ifi.dbs.elki.persistent.PageHeader: Returns the size of this header in Bytes.
size() - Method in class de.lmu.ifi.dbs.elki.result.CollectionResult: Get the collection size.
size() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeap: Returns the size of this heap.
size() - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.Heap: Returns the size of this heap.
size() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap: Returns the size of the heap.
size() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap: Returns the size of this heap.
size - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalVectorListElementSizeConstraint: Integer parameter providing the size constraint.
size() - Method in class de.lmu.ifi.dbs.elki.utilities.referencepoints.FullDatabaseReferencePoints.DatabaseProxy
size() - Method in class de.lmu.ifi.dbs.elki.utilities.Util.MaskedArrayList
SIZE_SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec: OptionID for GeneratorXMLSpec.SIZE_SCALE_PARAM
SIZE_SCALE_PARAM - Variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec: Parameter to give the configuration file
sizeConstraint - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ListSizeConstraint: The list size constraint.
sizePanel - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel: If saving as JPEG/PNG show width/height infos here.
sizescale - Variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec: Parameter for scaling the cluster sizes.
skippackages - Variable in class de.lmu.ifi.dbs.elki.application.internal.CheckELKIProperties: Package to skip matches in - unreleased code.
SLINK<O extends DatabaseObject,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering: Efficient implementation of the Single-Link Algorithm SLINK of R.
SLINK(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK: Constructor, adhering to Parameterizable
SLINK_LAMBDA - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK: Association ID for SLINK lambda value
SLINK_PI - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK: Association ID for SLINK pi pointer
small - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod: "Small value" condition for stopping
small - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner: Holds the value of PCAFilteredRunner.SMALL_PARAM.
SMALL_ID - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner: OptionID for PCAFilteredRunner.SMALL_PARAM
SMALL_PARAM - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner: Parameter to specify a constant small value to reset low eigenvalues, must be a double greater than 0.
smoothCubicTo(double, double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath: Smooth Cubic Bezier line to the given coordinates.
smoothQuadTo(double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath: Smooth quadratic Bezier line to the given coordinates.
SNNClustering<O extends DatabaseObject,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering: Shared nearest neighbor clustering.
SNNClustering(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering: Constructor, adhering to Parameterizable
SOD<V extends NumberVector<V,?>,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier
SOD(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD: Constructor, adhering to Parameterizable
sod - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODModel
SOD.SODModel<O extends NumberVector<O,?>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier
SOD.SODModel(Database<O>, List<Integer>, double, O) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODModel: Initialize SOD Model
SOD.SODProxyScoreResult - Class in de.lmu.ifi.dbs.elki.algorithm.outlier: Proxy class that converts a model result to an actual SOD score result.
SOD.SODProxyScoreResult(AnnotationResult<SOD.SODModel<?>>) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult: Constructor.
SOD_MODEL - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD: The association id to associate a subspace outlier degree.
SOD_SCORE - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD: The association id for the raw scores.
SolidLineStyleLibrary - Class in de.lmu.ifi.dbs.elki.visualization.style.lines: Line style library featuring solid lines for default styles only (combine with a color library to obtain enough classes!)
SolidLineStyleLibrary(StyleLibrary) - Constructor for class de.lmu.ifi.dbs.elki.visualization.style.lines.SolidLineStyleLibrary: Constructor.
solidreplacement - Variable in class de.lmu.ifi.dbs.elki.visualization.style.lines.DashedLineStyleLibrary: Replacement for the solid pattern in 'interpolated' mode
solution - Variable in class de.lmu.ifi.dbs.elki.result.AprioriResult: The frequent itemsets.
solutionToString(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem: Returns a string representation of the solution of this equation system.
solvable - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem: Indicates if linear equation system is solvable.
solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.CholeskyDecomposition: Solve A*X = B
solve(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem: solves linear system with the chosen method
solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition: Solve A*X = B
solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Solve A*X = B
solve(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.QRDecomposition: Least squares solution of A*X = B
solveByTotalPivotSearch() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem: Solves this linear equation system by total pivot search.
solveByTrivialPivotSearch() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem: Solves this linear equation system by trivial pivot search.
solved - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem: Indicates if solvability has been checked.
solveTranspose(Matrix) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Solve X*A = B, which is also A'*X' = B'
sort(List<V>, Database<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.KMeans: Returns a list of clusters.
sortClusters(Map<BitSet, List<Pair<BitSet, DatabaseObjectGroupCollection<List<Integer>>>>>, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH: Returns a sorted list of the clusters w.r.t. the subspace dimensionality in descending order.
SortedEigenPairs - Class in de.lmu.ifi.dbs.elki.math.linearalgebra: Helper class which encapsulates an array of eigenpairs (i.e. an array of eigenvectors and their corresponding eigenvalues).
SortedEigenPairs() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs: Creates a new empty SortedEigenPairs object.
SortedEigenPairs(EigenvalueDecomposition, boolean) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs: Creates a new SortedEigenPairs object from the specified eigenvalue decomposition.
SortedEigenPairs(List<EigenPair>) - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs: Creates a new SortedEigenPairs object from the specified list.
sortIDs() - Method in class de.lmu.ifi.dbs.elki.data.model.Bicluster: Sorts the row and column ids in ascending order.
sortIDs() - Method in class de.lmu.ifi.dbs.elki.data.model.BiclusterWithInverted: Sorts the row and column ids (and - if applicable - the ids of inverted rows) in ascending order.
SPACE_SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints: OptionID for AxisBasedReferencePoints.SPACE_SCALE_PARAM
SPACE_SCALE_PARAM - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints: Parameter to specify the extra scaling of the space, to allow out-of-data-space reference points.
spacescale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints: Holds the value of AxisBasedReferencePoints.SPACE_SCALE_PARAM.
SparseBitVectorLabelParser - Class in de.lmu.ifi.dbs.elki.parser: Provides a parser for parsing one sparse BitVector per line, where the indices of the one-bits are separated by whitespace.
SparseBitVectorLabelParser() - Constructor for class de.lmu.ifi.dbs.elki.parser.SparseBitVectorLabelParser: Provides a parser for parsing one sparse BitVector per line, where the indices of the one-bits are separated by whitespace.
SparseFloatVector - Class in de.lmu.ifi.dbs.elki.data: A SparseFloatVector is to store real values approximately as float values.
SparseFloatVector(Map<Integer, Float>, int) - Constructor for class de.lmu.ifi.dbs.elki.data.SparseFloatVector: Provides a SparseFloatVector consisting of double values according to the specified mapping of indices and values.
SparseFloatVector(float[]) - Constructor for class de.lmu.ifi.dbs.elki.data.SparseFloatVector: Provides a SparseFloatVector consisting of double values according to the specified mapping of indices and values.
SparseFloatVectorLabelParser - Class in de.lmu.ifi.dbs.elki.parser: Provides a parser for parsing one point per line, attributes separated by whitespace.
SparseFloatVectorLabelParser(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.parser.SparseFloatVectorLabelParser: Constructor, adhering to Parameterizable
SparseFloatVectorProjectionParser - Class in de.lmu.ifi.dbs.elki.parser.meta: Parser to project the ParsingResult obtained by a suitable base parser onto a selected subset of attributes.
SparseFloatVectorProjectionParser(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.parser.meta.SparseFloatVectorProjectionParser: Constructor.
SparseFloatVectorRandomProjectionParser - Class in de.lmu.ifi.dbs.elki.parser.meta: Parser to project the ParsingResult obtained by a suitable base parser onto a randomly selected subset of attributes.
SparseFloatVectorRandomProjectionParser(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.parser.meta.SparseFloatVectorRandomProjectionParser: Constructor.
SpatialApproximationMaterializeKNNPreprocessor<O extends NumberVector<O,?>,D extends Distance<D>,N extends SpatialNode<N,E>,E extends SpatialEntry> - Class in de.lmu.ifi.dbs.elki.preprocessing: A preprocessor for annotation of the k nearest neighbors (and their distances) to each database object.
SpatialApproximationMaterializeKNNPreprocessor(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.preprocessing.SpatialApproximationMaterializeKNNPreprocessor: Constructor, adhering to Parameterizable
SpatialComparable - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial: Defines the required methods needed for comparison of spatial objects.
SpatialComparator - Class in de.lmu.ifi.dbs.elki.index.tree.spatial: Compares objects of type SpatialComparable.
SpatialComparator(int, int) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialComparator: Creates a new spatial comparator with the specified parameters.
SpatialDirectoryEntry - Class in de.lmu.ifi.dbs.elki.index.tree.spatial: Represents an entry in a directory node of a spatial index.
SpatialDirectoryEntry() - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry: Empty constructor for serialization purposes.
SpatialDirectoryEntry(int, HyperBoundingBox) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry: Constructs a new SpatialDirectoryEntry object with the given parameters.
SpatialDistanceFunction<V extends FeatureVector<V,?>,D extends Distance<D>> - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial: Defines the requirements for a distance function that can used in spatial index to measure the dissimilarity between spatial data objects.
SpatialEntry - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial: Defines the requirements for an entry in a node of a Spatial Index.
SpatialIndex<O extends NumberVector<O,?>,N extends SpatialNode<N,E>,E extends SpatialEntry> - Class in de.lmu.ifi.dbs.elki.index.tree.spatial: Abstract super class for all spatial index classes.
SpatialIndex(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialIndex: Constructor, adhering to Parameterizable
SpatialIndexDatabase<O extends NumberVector<O,?>,N extends SpatialNode<N,E>,E extends SpatialEntry> - Class in de.lmu.ifi.dbs.elki.database: SpatialIndexDatabase is a database implementation which is supported by a spatial index structure.
SpatialIndexDatabase(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.database.SpatialIndexDatabase: Constructor, adhering to Parameterizable
SpatialLeafEntry - Class in de.lmu.ifi.dbs.elki.index.tree.spatial: Represents an entry in a leaf node of a spatial index.
SpatialLeafEntry() - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry: Empty constructor for serialization purposes.
SpatialLeafEntry(int, double[]) - Constructor for class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry: Constructs a new LeafEntry object with the given parameters.
SpatialNode<N extends SpatialNode<N,E>,E extends SpatialEntry> - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial: Defines the requirements for an object that can be used as a node in a Spatial Index.
SpatialObject - Interface in de.lmu.ifi.dbs.elki.index.tree.spatial: Defines the requirements for objects that can be indexed by a Spatial Index, which are spatial nodes or data objects.
specfile - Variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec: The configuration file.
spinner - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow
spinnerHeight - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
spinnerQual - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
spinnerWidth - Variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
split - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval: The object to perform interval splitting.
split() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval: Splits this interval into 2 children.
split(N) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree: Splits the specified node and returns the split result.
split - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree.SplitResult
split(N) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree: Splits the specified node and returns the newly created split node.
SPLIT - Static variable in class de.lmu.ifi.dbs.elki.normalization.MultiRepresentedObjectNormalization: A pattern defining a comma.
SPLIT - Static variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ListParameter: A pattern defining a ",".
splitAtLastBlank(String, int) - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil: Splits the specified string at the last blank before width.
splitAxis - Variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.TopologicalSplit: The split axis.
splitEntries(List<E>, List<E>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTreeNode: Splits the entries of this node into a new node at the specified splitPoint and returns the newly created node.
splitEntries(List<E>, int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeNode: Splits the entries of this node into a new node at the specified splitPoint and returns the newly created node.
splitfreq - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram: Flag to make split frequencies
SPLITFREQ_ID - Static variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram: OptionID for ComputeOutlierHistogram.SPLITFREQ_PARAM
SPLITFREQ_PARAM - Variable in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram: Flag to count frequencies of outliers and non-outliers separately Key: -histogram.splitfreq
splitPoint - Variable in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.TopologicalSplit: The index of the split point.
sqrSum - Variable in class de.lmu.ifi.dbs.elki.math.MeanVariance: Sum of Squares
Sqrt2PI - Static variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.GaussianFittingFunction: Precomputed constant value of Sqrt(2*PI)
SqrtStandardDeviationScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier: Scaling that can map arbitrary values to a probability in the range of [0:1].
SqrtStandardDeviationScaling(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling: Constructor, adhering to Parameterizable
sqrtVector() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector: Square roots every element of the vector.
SquaredPearsonCorrelationDistanceFunction<V extends NumberVector<V,N>,N extends Number> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.correlation: Squared Pearson correlation distance function for feature vectors.
SquaredPearsonCorrelationDistanceFunction() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction: Provides a SquaredPearsonCorrelationDistanceFunction.
srcColorModel - Variable in class de.lmu.ifi.dbs.elki.data.images.BlendComposite.BlendingContext: Source color model
ssqerr(int, int, double[], double[], double, double) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTree
ssr - Variable in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression: The sum of square residuals
sst - Variable in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression: The sum of square totals
StandAloneApplication - Class in de.lmu.ifi.dbs.elki.application: StandAloneApplication sets additionally to the flags set by AbstractApplication the output parameter out.
StandAloneApplication(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.application.StandAloneApplication: Adds parameter StandAloneApplication.OUTPUT_PARAM to the option handler additionally to parameters of super class.
StandAloneInputApplication - Class in de.lmu.ifi.dbs.elki.application: StandAloneInputApplication extends StandAloneApplication and sets additionally the parameter in.
StandAloneInputApplication(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.application.StandAloneInputApplication: Adds parameter StandAloneInputApplication.INPUT_PARAM to the option handler additionally to parameters of super class.
StandardCovarianceMatrixBuilder<V extends NumberVector<V,?>,D extends NumberDistance<D,?>> - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca: Class for building a "traditional" covariance matrix.
StandardCovarianceMatrixBuilder() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.StandardCovarianceMatrixBuilder
standardDeviation - Variable in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution: The standard deviation within this solution.
StandardDeviationScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling.outlier: Scaling that can map arbitrary values to a probability in the range of [0:1].
StandardDeviationScaling(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling: Constructor, adhering to Parameterizable
StarBasedReferencePoints<O extends NumberVector<O,?>> - Class in de.lmu.ifi.dbs.elki.utilities.referencepoints: Star-based strategy to pick reference points.
StarBasedReferencePoints(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints: Constructor, adhering to Parameterizable
START_TRACE_AT - Static variable in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord: Name of this class.
statements - Variable in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass: Actual CSS statements
STATIC_LOGGER - Static variable in class de.lmu.ifi.dbs.elki.application.AbstractApplication: We need a static logger in this class.
StaticScalingFunction - Interface in de.lmu.ifi.dbs.elki.utilities.scaling: Interface for Scaling functions that do NOT depend on analyzing the data set.
stddev - Variable in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.NormalDistribution: Standard deviation
stddev - Variable in class de.lmu.ifi.dbs.elki.normalization.AttributeWiseVarianceNormalization: Stores the standard deviation in each dimension.
STDDEV_ID - Static variable in class de.lmu.ifi.dbs.elki.normalization.AttributeWiseVarianceNormalization: OptionID for AttributeWiseVarianceNormalization.STDDEV_PARAM
STDDEV_PARAM - Variable in class de.lmu.ifi.dbs.elki.normalization.AttributeWiseVarianceNormalization: Parameter for stddevs.
step1(int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK: First step: Initialize P(id) = id, L(id) = infinity.
step2(int, ArrayList<Integer>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK: Second step: Determine the pairwise distances from all objects in the pointer representation to the new object with the specified id.
step3(int, ArrayList<Integer>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK: Third step: Determine the values for P and L
step4(int, ArrayList<Integer>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK: Fourth step: Actualize the clusters if necessary
stopped - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot: Flag to indicate shutdown.
stopThumbnailer() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot: Stop a running thumbnailer.
store - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel: Settings storage
store - Variable in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI: Settings storage
store - Variable in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile: Data store
store - Variable in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager: Store the contained CSS classes.
STR_CHOOSE_FORMAT - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
STR_IMAGE_HEIGHT - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
STR_IMAGE_SIZE - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
STR_IMAGE_WIDTH - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
STR_JPEG_QUALITY - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
STR_LOCK_ASPECT_RATIO - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
STR_RESET_IMAGE_SIZE - Static variable in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel
strategy - Variable in class de.lmu.ifi.dbs.elki.preprocessing.DiSHPreprocessor: The strategy to determine the preference vector.
STRATEGY_ID - Static variable in class de.lmu.ifi.dbs.elki.preprocessing.DiSHPreprocessor: OptionID for DiSHPreprocessor.STRATEGY_PARAM
STRATEGY_PARAM - Variable in class de.lmu.ifi.dbs.elki.preprocessing.DiSHPreprocessor: The strategy for determination of the preference vector, available strategies are: DiSHPreprocessor.Strategy.APRIORI and DiSHPreprocessor.Strategy.MAX_INTERSECTION.
stream - Variable in class de.lmu.ifi.dbs.elki.result.textwriter.SingleStreamOutput: Output stream
StreamFactory - Interface in de.lmu.ifi.dbs.elki.result.textwriter: Interface for output handling (single file, multiple files, ...)
STRING_OPTIONAL - Static variable in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters: Pseudo-value used in options that are optional, to unset.
STRING_USE_DEFAULT - Static variable in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters: Pseudo-value used in dropdowns for options that have a default value
StringParameter - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters: Parameter class for a parameter specifying a string.
StringParameter(OptionID, List<ParameterConstraint<String>>, String) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID, constraints and default value.
StringParameter(OptionID, List<ParameterConstraint<String>>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID, constraints and default value.
StringParameter(OptionID, List<ParameterConstraint<String>>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID, constraints and default value.
StringParameter(OptionID, ParameterConstraint<String>, String) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID, constraints and default value.
StringParameter(OptionID, ParameterConstraint<String>, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID, constraints and default value.
StringParameter(OptionID, ParameterConstraint<String>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID, constraints and default value.
StringParameter(OptionID, String) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID, and default value.
StringParameter(OptionID, boolean) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID.
StringParameter(OptionID) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter: Constructs a string parameter with the given optionID.
stringToColor(String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Convert a color name from SVG syntax to an AWT color object.
strip - Variable in class de.lmu.ifi.dbs.elki.application.internal.CheckELKIProperties: Pattern to strip comments, while keeping commented class names.
STRONG_EIGENVECTOR_MATRIX - Static variable in class de.lmu.ifi.dbs.elki.database.AssociationID: The association id to associate the strong eigenvector weighted matrix of an object.
strongEigenPairs - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FilteredEigenPairs: The strong eigenpairs.
strongEigenvalues - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult: The strong eigenvalues.
strongEigenvectors - Variable in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution: The strong eigenvectors of the hyperplane induced by the correlation.
strongEigenvectors - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult: The strong eigenvectors to their corresponding filtered eigenvalues.
StudentDistribution - Class in de.lmu.ifi.dbs.elki.math.statistics: Tabelarizes the values for student distribution.
StudentDistribution() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.StudentDistribution
style - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationLabel
style - Variable in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Primary style information
STYLE_CURVES_FLAG - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis1d.Projection1DHistogramVisualizer: Flag to specify the "curves" rendering style.
STYLE_CURVES_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis1d.Projection1DHistogramVisualizer: OptionID for Projection1DHistogramVisualizer.STYLE_CURVES_FLAG.
STYLE_LIBRARY - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext: Identifier for the main style library to use.
stylelib - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizersForResult: Style library to use.
STYLELIB_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizersForResult: Option ID for the style properties to use, VisualizersForResult.STYLELIB_PARAM
STYLELIB_PARAM - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizersForResult: Parameter to get the style properties file.
StyleLibrary - Interface in de.lmu.ifi.dbs.elki.visualization.style: Style library interface.
SUBCLU<V extends NumberVector<V,?>,D extends Distance<D>> - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.subspace: Implementation of the SUBCLU algorithm, an algorithm to detect arbitrarily shaped and positioned clusters in subspaces.
SUBCLU(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU: Constructor, adhering to Parameterizable
SubplotSelectedEvent - Class in de.lmu.ifi.dbs.elki.visualization.gui.overview: Event when a particular subplot was selected.
SubplotSelectedEvent(OverviewPlot<?>, int, String, int, double, double) - Constructor for class de.lmu.ifi.dbs.elki.visualization.gui.overview.SubplotSelectedEvent: Constructor.
subspace - Variable in class de.lmu.ifi.dbs.elki.data.model.SubspaceModel: The subspace of the cluster.
Subspace<V extends FeatureVector<V,?>> - Class in de.lmu.ifi.dbs.elki.data: Represents a subspace of the original data space.
Subspace(int) - Constructor for class de.lmu.ifi.dbs.elki.data.Subspace: Creates a new one-dimensional subspace of the original data space.
Subspace(BitSet) - Constructor for class de.lmu.ifi.dbs.elki.data.Subspace: Creates a new k-dimensional subspace of the original data space.
Subspace.DimensionComparator - Class in de.lmu.ifi.dbs.elki.data: A comparator for subspaces based on their involved dimensions.
Subspace.DimensionComparator() - Constructor for class de.lmu.ifi.dbs.elki.data.Subspace.DimensionComparator
SUBSPACE_PATTERN - Static variable in class de.lmu.ifi.dbs.elki.distance.SubspaceDistance: The pattern for parsing subspace values
SubspaceAndMeanModel<V extends FeatureVector<V,?>> - Class in de.lmu.ifi.dbs.elki.data.model: Model for Subspace Clusters that additionally stores a mean vector.
SubspaceAndMeanModel(BitSet, V) - Constructor for class de.lmu.ifi.dbs.elki.data.model.SubspaceAndMeanModel: Creates a new SubspaceModel for the specified subspace.
subspacedim() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem: Return dimensionality of spanned subspace.
SubspaceDistance - Class in de.lmu.ifi.dbs.elki.distance: The subspace distance is a special distance that indicates the dissimilarity between subspaces of equal dimensionality.
SubspaceDistance() - Constructor for class de.lmu.ifi.dbs.elki.distance.SubspaceDistance: Empty constructor for serialization purposes.
SubspaceDistance(double, double) - Constructor for class de.lmu.ifi.dbs.elki.distance.SubspaceDistance: Constructs a new SubspaceDistance object consisting of the specified subspace distance and affine distance.
subspaceDistance - Variable in class de.lmu.ifi.dbs.elki.distance.SubspaceDistance: The subspace distance.
SubspaceDistanceFunction<V extends NumberVector<V,?>,P extends LocalPCAPreprocessor<V>> - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.subspace: Provides a distance function to determine a kind of correlation distance between two points, which is a pair consisting of the distance between the two subspaces spanned by the strong eigenvectors of the two points and the affine distance between the two subspaces.
SubspaceDistanceFunction(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction: Constructor, adhering to Parameterizable
SubspaceModel<V extends FeatureVector<V,?>> - Class in de.lmu.ifi.dbs.elki.data.model: Model for Subspace Clusters.
SubspaceModel(Subspace<V>) - Constructor for class de.lmu.ifi.dbs.elki.data.model.SubspaceModel: Creates a new SubspaceModel for the specified subspace.
SubspaceModel(BitSet) - Constructor for class de.lmu.ifi.dbs.elki.data.model.SubspaceModel: Creates a new SubspaceModel for a subspace of the specified dimensions.
subspaceOutlierDegree(O, O, BitSet) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODModel
sum - Variable in class de.lmu.ifi.dbs.elki.math.MeanVariance: Sum of values
superclass - Variable in class de.lmu.ifi.dbs.elki.properties.IterateKnownImplementations: Super class
supports - Variable in class de.lmu.ifi.dbs.elki.result.AprioriResult: The supports of all itemsets.
svd() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Singular Value Decomposition
SVG_COLOR_NAMES - Static variable in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: SVG color names conversion.
svgCanvas - Variable in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow
svgCanvas - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow: The SVG canvas.
svgCircle(double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Create a SVG circle
svgCircle(Document, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Create a SVG circle element.
svgElement(String) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Create a SVG element in the SVG namespace.
svgElement(Document, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Create a SVG element in appropriate namespace
svgLine(double, double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Create a SVG line element
svgLine(Document, double, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Create a SVG line element.
SVGPath - Class in de.lmu.ifi.dbs.elki.visualization.svg: Element used for building an SVG path using a string buffer.
SVGPath() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath: Empty path constructor.
SVGPath(double, double) - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGPath: Constructor with initial point.
SVGPlot - Class in de.lmu.ifi.dbs.elki.visualization.svg: Base class for SVG plots.
SVGPlot() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Create a new plotting document.
svgRect(double, double, double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Create a SVG rectangle
svgRect(Document, double, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Create a SVG rectangle element.
SVGSaveDialog - Class in de.lmu.ifi.dbs.elki.visualization.savedialog: A save dialog to save/export a SVG image to a file.
SVGSaveDialog() - Constructor for class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog
SVGSimpleLinearAxis - Class in de.lmu.ifi.dbs.elki.visualization.svg: Class to draw a simple axis with tick marks on the plot.
SVGSimpleLinearAxis() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis
SVGSimpleLinearAxis.ALIGNMENT - Enum in de.lmu.ifi.dbs.elki.visualization.svg: Flag for axis label position.
SVGSimpleLinearAxis.ALIGNMENT() - Constructor for enum de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis.ALIGNMENT
svgText(double, double, String) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Create a SVG text element.
svgText(Document, double, double, String) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Create a SVG text element.
SVGUtil - Class in de.lmu.ifi.dbs.elki.visualization.svg: Utility class for SVG processing.
SVGUtil() - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil
svgWaitIcon(Document, double, double, double, double) - Static method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil: Draw a simple "please wait" icon (in-progress) as placeholder for running renderings.
swap(int, int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeap: Swaps the nodes at the indices i1 and i2 in the array.
swap(int, int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap: Swaps the position of two elements.
swapColumn(int, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Swaps the specified columns of this matrix.
SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair: Comparator to compare by swapped components
SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair: Comparator to compare by swapped components
SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair: Comparator to compare by swapped components
SWAPPED_COMPARATOR - Static variable in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair: Comparator to compare by swapped components
swapRow(int, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix: Swaps the specified rows of this matrix.
sync - Variable in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner: Owner/Synchronization object
synchronizer - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas: Synchronizer to use when synchronizing SVG plots
synchronizer - Variable in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner: Synchronizer that can block events from being executed right away.
synchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot: Assign an update synchronizer.
synchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner: Set a new update synchronizer.
syncrunner - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer: The current Runnable scheduled