A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

G

g - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.ERPDistanceFunction

Keeps the currently set g.

G_ID - Static variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.ERPDistanceFunction

OptionID for ERPDistanceFunction.G_PARAM

G_PARAM - Variable in class de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.ERPDistanceFunction

G parameter

gamma - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling

Gamma value.

gamma - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer

Gamma parameter.

GAMMA_ID - Static variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer

OptionID for BubbleVisualizer.GAMMA_PARAM.

GAMMA_PARAM - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer

Parameter for the gamma-correction.

GammaScaling - Class in de.lmu.ifi.dbs.elki.utilities.scaling

Non-linear scaling function using a Gamma curve.

GammaScaling() - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling

Default constructor.

GammaScaling(double) - Constructor for class de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling

Constructor with Gamma value.

gammaScaling - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer

Used for Gamma-Correction.

GaussianFittingFunction - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.fitting

Gaussian function for parameter fitting Based mostly on fgauss in "Numerical Recpies in C".

GaussianFittingFunction() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.GaussianFittingFunction

GaussianKernelDensityFunction - Class in de.lmu.ifi.dbs.elki.math.statistics

Gaussian kernel density estimator.

GaussianKernelDensityFunction() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.GaussianKernelDensityFunction

Private, empty constructor.

GaussianModel<V extends NumberVector<V,Double>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Outlier have smallest GMOD_PROB: the outlier scores is the probability density of the assumed distribution.

GaussianModel(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianModel

Constructor, adhering to Parameterizable

GaussianUniformMixture<V extends NumberVector<V,Double>> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier

Outlier detection algorithm using a mixture model approach.

GaussianUniformMixture(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianUniformMixture

Constructor, adhering to Parameterizable

GaussStddevWeight - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions

Gaussian Weight function, scaled such using standard deviation factor * exp(-.5 * (distance/stddev)^2) with factor being 1 / sqrt(2 * PI)

GaussStddevWeight() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussStddevWeight

GaussWeight - Class in de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions

Gaussian Weight function, scaled such that the result it 0.1 at distance == max exp(-2.3025850929940455 * (distance/max)^2)

GaussWeight() - Constructor for class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussWeight

gen - Variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec

The actual generator class

generate() - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.Distribution

Generate a new random value

generate() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.NormalDistribution

Generate a random value with the generators parameters

generate() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.UniformDistribution

Generate a random value with the generators parameters

generate(int) - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterface

Generate a specified number of points

generate() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorMain

Main loop to generate data set.

generate(int) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Generate the given number of additional points.

generate(int) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

"Generate" new cluster points.

generateDefaultClustering() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext

Generate a default (fallback) clustering.

generateExplanation(Database<V>, Integer, LinkedList<Integer>) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

generateModel(Database<V>, Collection<Integer>) - Method in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator

Runs the pca on the given set of IDs.

generateModel(Database<V>, Collection<Integer>, V) - Method in class de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator

Runs the pca on the given set of IDs and for the given centroid.

generateSubspaceCandidates(List<Subspace<V>>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU

Generates d+1-dimensional subspace candidates from the specified d-dimensional subspaces.

generateThumbnail(Element, VisualizationInfo) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot

Generate a single Thumbnail.

generateThumbnail(Thumbnailer, int) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationInfo

Generate a thumbnail for this visualization.

GENERATOR_SCHEMA_FILE - Static variable in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec

File name of the generators XML Schema file.

GeneratorInterface - Interface in de.lmu.ifi.dbs.elki.data.synthetic.bymodel

Interface for cluster generators

GeneratorInterfaceDynamic - Interface in de.lmu.ifi.dbs.elki.data.synthetic.bymodel

Interface for a dynamic cluster generator.

GeneratorMain - Class in de.lmu.ifi.dbs.elki.data.synthetic.bymodel

Generate a data set according to a given model.

GeneratorMain() - Constructor for class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorMain

generators - Variable in class de.lmu.ifi.dbs.elki.evaluation.paircounting.generator.PairGeneratorMerge

Generators to merge

GeneratorSingleCluster - Class in de.lmu.ifi.dbs.elki.data.synthetic.bymodel

Class to generate a single cluster according to a model as well as getting the density of a given model at that point (to evaluate generated points according to the same model)

GeneratorSingleCluster(String, int, double, Random) - Constructor for class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Generator (without axes)

GeneratorStatic - Class in de.lmu.ifi.dbs.elki.data.synthetic.bymodel

Class for static clusters, that is an implementation of GeneratorInterface that will return only a given set of points.

GeneratorStatic(String, LinkedList<Vector>) - Constructor for class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Construct generator using given name and points

GeneratorXMLSpec - Class in de.lmu.ifi.dbs.elki.application

Generate a data set based on a specified model (using an XML specification)

GeneratorXMLSpec(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec

Constructor, adhering to Parameterizable

GENERIC_SIZE - Static variable in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Generic size

get(Integer) - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

get(AssociationID<T>) - Method in class de.lmu.ifi.dbs.elki.database.AssociationMaps

Provides the mapping from object ids to associated objects for the given AssociationID.

get(AssociationID<T>) - Method in class de.lmu.ifi.dbs.elki.database.Associations

Retrieves the object associated under the given association id.

get(Integer) - Method in interface de.lmu.ifi.dbs.elki.database.Database

Returns the DatabaseObject represented by the specified id.

get(String) - Method in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile

Find a saved setting by key.

get(double) - Method in class de.lmu.ifi.dbs.elki.math.FlexiHistogram

get(int, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Get a single element.

get(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Returns the value at the specified row.

get(double) - Method in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Get the data at a given Coordinate.

get(int) - Method in interface de.lmu.ifi.dbs.elki.persistent.Cache

Retrieves a page from this cache.

get(int) - Method in class de.lmu.ifi.dbs.elki.persistent.LRUCache

Retrieves a page from the cache.

get(K, Class<T>) - Method in class de.lmu.ifi.dbs.elki.utilities.AnyMap

Type checked get method

get(Object) - Method in class de.lmu.ifi.dbs.elki.utilities.AnyMap

Deprecated. use AnyMap.get(Object, Class) or AnyMap.getGenerics(Object, Class) instead, for type safety!

get(double, double) - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotMap

Get the visualization on the given coordinates.

getAbofFilter(KernelMatrix<V>, Integer, HashMap<Integer, Double>, double, double, List<Integer>) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

getActiveRatio() - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.LazyCanvasResizer

Get the components last applied ratio.

getActualMaximum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta

getActualMaximum() - Method in interface de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta

Get the actual maximum of the value range.

getActualMaximum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore

getActualMinimum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta

getActualMinimum() - Method in interface de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta

Get the actual minimum of the value range.

getActualMinimum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore

getAdapterForDistance(ClusterOrderResult<D>) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.OPTICSPlotVisualizer

Try to find a distance adapter.

getAffineDistance() - Method in class de.lmu.ifi.dbs.elki.distance.SubspaceDistance

Returns the value of the affine distance.

getAllClusters() - Method in class de.lmu.ifi.dbs.elki.data.Clustering

Collect all clusters (recursively) into a List.

getAllIds() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Get all used DOM Ids in this plot.

getAllParameters() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters

Get all seen parameters, set or unset, along with their owner objects.

getAlpha() - Method in class de.lmu.ifi.dbs.elki.preprocessing.HiSCPreprocessor

Returns the value of the alpha parameter (i.e. the maximum allowed variance along a coordinate axis).

getAncestors(T) - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Delegate to hierarchy object

getAncestors(C, T) - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyImplementation

Collect ancestors (recursive parents)

getAncestors(T) - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyInterface

Collect ancestors (recursive parents)

getAncestors(C, T) - Method in class de.lmu.ifi.dbs.elki.data.cluster.SimpleHierarchy

Collect ancestors.

getAnnotationResults(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Collect all Annotation results from a Result

getApproximatedKnnDistance(int, DistanceFunction<O, D>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ApproximationLine

Returns the approximated knn-distance at the specified k.

getArray() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Access the internal two-dimensional array.

getArrayCopy() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Copy the internal two-dimensional array.

getAssignments() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.MTreeSplit

Returns the assignments of this split.

getAssociation(AssociationID<T>, Integer) - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

getAssociation(AssociationID<T>, Integer) - Method in interface de.lmu.ifi.dbs.elki.database.Database

Returns the association specified by the given associationID and related to the specified Object.

getAssociation(AssociationID<M>) - Method in class de.lmu.ifi.dbs.elki.result.MultiResult

Get a meta data object.

getAssociationGenerics(AssociationID<?>) - Method in class de.lmu.ifi.dbs.elki.result.MultiResult

Get a meta data object, with weaker compile time type checking.

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult

getAssociationID(String) - Static method in class de.lmu.ifi.dbs.elki.database.AssociationID

Returns the AssociationID for the given name if it exists, null otherwise.

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.KernelBasedLocallyWeightedDistanceFunction

Returns the association ID for the association to be set by the preprocessor.

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractPreferenceVectorBasedCorrelationDistanceFunction

Returns the association ID for the association to be set by the preprocessor.

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction

getAssociationID() - Method in interface de.lmu.ifi.dbs.elki.preprocessing.PreprocessorClient

Returns the association ID for the association to be set by the preprocessor.

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.preprocessing.SharedNearestNeighborsPreprocessor

Provides the association id used for annotation of the nearest neighbors.

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.result.AnnotationFromDatabase

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.result.AnnotationFromHashMap

getAssociationID() - Method in interface de.lmu.ifi.dbs.elki.result.AnnotationResult

Return the association ID of this result.

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult.PredecessorAdapter

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult.ReachabilityDistanceAdapter

getAssociationID() - Method in class de.lmu.ifi.dbs.elki.result.IDResult

getAssociations(Integer) - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

Returns all associations for a given ID.

getAssociations(Integer) - Method in interface de.lmu.ifi.dbs.elki.database.Database

Returns all associations for a given ID.

getAssociations() - Method in class de.lmu.ifi.dbs.elki.result.MultiResult

Get stored meta data associations.

getAxes() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Get axis generators.

getB(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.PolynomialApproximation

Returns the parameter bp at the specified index p.

getBackgroundColor(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getBackgroundColor(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Retrieve background color for an item

getBaseObjectClassExpensive(Database<O>) - Static method in class de.lmu.ifi.dbs.elki.utilities.DatabaseUtil

Do a full inspection of the database to find the base object class.

getBestSorting() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.TopologicalSplit

Returns whether the sorting according to maximal or to minimal value has been used for choosing the split axis and split point.

getBinForColor(int) - Method in class de.lmu.ifi.dbs.elki.data.images.AbstractComputeColorHistogram

Compute the bin number from a pixel color value.

getBinForColor(int) - Method in class de.lmu.ifi.dbs.elki.data.images.ComputeHSBColorHistogram

getBinForColor(int) - Method in class de.lmu.ifi.dbs.elki.data.images.ComputeNaiveHSBColorHistogram

getBinForColor(int) - Method in class de.lmu.ifi.dbs.elki.data.images.ComputeNaiveRGBColorHistogram

getBinNr(double) - Method in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Compute the bin number.

getBinsize() - Method in class de.lmu.ifi.dbs.elki.math.FlexiHistogram

getBinsize() - Method in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Get the size (width) of a bin.

getBits() - Method in class de.lmu.ifi.dbs.elki.data.BitVector

Returns a copy of the bits currently set in this BitVector.

getCached(String, String, Class<T>) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

Get a value from the cache (to avoid repeated parsing)

getCacheIndex() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.Deap

Returns the index of this deap in the cachePath of the persistent heap.

getCacheIndizes() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns an array of the indices of the deaps in the cache.

getCapacity() - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractNode

Returns the capacity of this node (i.e. the length of the entries arrays).

getCellEditorValue() - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.AdjustingEditor

getCellEditorValue() - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.FileNameEditor

Delegate getCellEditorValue to the text field.

getCentroid() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

Returns the centroid of this model.

getCentroid() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationModel

Get assigned for Centroid

getChildren() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Delegate to hierarchy object

getChildren(C) - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyImplementation

Get children list.

getChildren() - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyInterface

Get children list.

getChildren(C) - Method in class de.lmu.ifi.dbs.elki.data.cluster.SimpleHierarchy

Return children

getChildWithLeastOverlap(N, HyperBoundingBox) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Returns the path information of the entry of the specified node which needs least overlap enlargement if the given mbr would be inserted into.

getChiSq() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod

Get current ChiSquared (squared error sum)

getClass(String, Object) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager

Retrieve a single class by name and owner

getClass(String) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager

Retrieve a single class by name only

getClasses() - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager

Get all CSS classes in this manager.

getClassLabels(Database<?>) - Static method in class de.lmu.ifi.dbs.elki.utilities.DatabaseUtil

Retrieves all class labels within the database.

getClassOrObjectLabel(Database<?>, Integer) - Static method in class de.lmu.ifi.dbs.elki.utilities.DatabaseUtil

Get the class label or object label of an object in the database

getClipmax() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Return a copy of the 'clipping maximum' vector

getClipmin() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Return a copy of the 'clipping minimum' vector.

getClusteringResults(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Collect all clustering results from a Result

getClusterOrder() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult

Retrieve the complete cluster order.

getCoefficents() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Returns a copy of the coefficient array of this linear equation system.

getCoefficients() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.PolynomialApproximation

Returns a copy of the the array of coefficients b0, ..., bp.

getCollectionResults(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Collect all collection results from a Result

getColor(double) - Method in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow

Get the appropriate color for the given distance.

getColor(int) - Method in interface de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary

Return the i'th color.

getColor(int) - Method in class de.lmu.ifi.dbs.elki.visualization.colors.ListBasedColorLibrary

getColor(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getColor(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Retrieve a color for an item

getColorForEntry(ClusterOrderEntry<?>) - Method in interface de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSColorAdapter

Get the color value for a particular cluster order entry.

getColorForEntry(ClusterOrderEntry<?>) - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSColorFromClustering

getColorForEntry(ClusterOrderEntry<?>) - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSColorStatic

getColorSet(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getColorSet(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Retrieve colorset for an item

getColumn(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the jth column of this matrix.

getColumnClass(int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel

getColumnCount() - Method in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel

getColumnDimensionality() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the dimensionality of the columns of this matrix.

getColumnIDs() - Method in class de.lmu.ifi.dbs.elki.data.model.Bicluster

Provides a copy of the column IDs contributing to the bicluster.

getColumnName(int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel

getColumnPackedCopy() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Make a one-dimensional column packed copy of the internal array.

getColumnPermutations() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Returns a copy of the column permutations, column i is at position column[i].

getColumnVector() - Method in class de.lmu.ifi.dbs.elki.data.BitVector

Returns a Vector representing in one column and getDimensionality() rows the values of this BitVector as double values.

getColumnVector() - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector

getColumnVector() - Method in class de.lmu.ifi.dbs.elki.data.FloatVector

getColumnVector() - Method in interface de.lmu.ifi.dbs.elki.data.NumberVector

Returns a Vector representing in one column and getDimensionality() rows the values of this NumberVector of V.

getColumnVector() - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

getColumnVector(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the jth column of this matrix as vector.

getCommonPreferenceVector() - Method in class de.lmu.ifi.dbs.elki.distance.PreferenceVectorBasedCorrelationDistance

Returns the common preference vector of the two objects defining this distance.

getComponentType(T[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil

Retrieve the component type of a given array.

getConservativeKnnDistanceApproximation() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPDirectoryEntry

Returns the conservative approximation line.

getConservativeKnnDistanceApproximation() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPEntry

Returns the conservative approximation line.

getConservativeKnnDistanceApproximation() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry

Returns the conservative approximation line.

getConsoleWidth() - Static method in class de.lmu.ifi.dbs.elki.utilities.FormatUtil

Get the width of the terminal window (on Unix xterms), with a default of 78 characters.

getCorrelationDimension() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Get correlation (subspace) dimensionality

getCorrelationDimensionality() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

Return the correlation dimensionality.

getCorrelationValue() - Method in class de.lmu.ifi.dbs.elki.distance.CorrelationDistance

Returns the correlation dimension between the objects.

getCount() - Method in class de.lmu.ifi.dbs.elki.math.MeanVariance

Get the number of points the average is based on.

getCovarianceMatrix() - Method in class de.lmu.ifi.dbs.elki.data.model.EMModel

getCovarianceMatrixBuilder() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCARunner

Get covariance matrix builder

getCoverage() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique.CLIQUESubspace

Returns the coverage of this subspace, which is the number of all feature vectors that fall inside the dense units of this subspace.

getCoveringRadius() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry

Returns the covering radius of this entry.

getCoveringRadius() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry

Returns the covering radius if this entry is a directory entry, null otherwise.

getCoveringRadius() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry

Returns null, since a leaf entry has no covering radius.

getCoverMaximum() - Method in class de.lmu.ifi.dbs.elki.math.FlexiHistogram

getCoverMaximum() - Method in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Get maximum (covered by bins, not data!)

getCoverMinimum() - Method in class de.lmu.ifi.dbs.elki.math.FlexiHistogram

getCoverMinimum() - Method in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Get minimum (covered by bins, not data!)

getCovmat() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod

Get the final covariance matrix.

getCSSClassManager() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Get the plots CSS class manager.

getCurrentRatio() - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.LazyCanvasResizer

Get the components current ratio.

getD() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition

Return the block diagonal eigenvalue matrix

getD_max() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the maximum distance value.

getD_min() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the minimum distance value.

getData() - Method in class de.lmu.ifi.dbs.elki.math.FlexiHistogram

getData() - Method in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Get the raw data.

getDatabase() - Method in class de.lmu.ifi.dbs.elki.data.model.Bicluster

Getter to retrieve the database

getDatabase(Normalization<O>) - Method in interface de.lmu.ifi.dbs.elki.database.connection.DatabaseConnection

Returns a Database according to parameter settings.

getDatabase(Normalization<O>) - Method in class de.lmu.ifi.dbs.elki.database.connection.EmptyDatabaseConnection

getDatabase(Normalization<O>) - Method in class de.lmu.ifi.dbs.elki.database.connection.InputStreamDatabaseConnection

getDatabase(Normalization<MultiRepresentedObject<O>>) - Method in class de.lmu.ifi.dbs.elki.database.connection.MultipleFileBasedDatabaseConnection

getDatabase() - Method in class de.lmu.ifi.dbs.elki.distance.AbstractMeasurementFunction

Returns the database holding the objects for which the measurements should be computed.

getDatabase() - Method in class de.lmu.ifi.dbs.elki.result.AnnotationFromDatabase

Return database referenced by annotations

getDatabase() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext

Get the database itself

getDatabaseIDs(Database<ParameterizationFunction>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH

Returns the set of ids belonging to the specified database.

getDatabaseObjectGroup() - Method in class de.lmu.ifi.dbs.elki.data.model.Bicluster

Creates a DatabaseObjectGroup for the row IDs included in this Bicluster.

getDeap(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the deap with the specified index.

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractLocallyWeightedDistanceFunction

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction

Returns the name of the default preprocessor.

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DiSHDistanceFunction

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.HiSCDistanceFunction

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction

getDefaultPreprocessorClass() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction

getDefaultPreprocessorClass() - Method in interface de.lmu.ifi.dbs.elki.preprocessing.PreprocessorClient

Returns the name of the default preprocessor.

getDefaultStream() - Method in class de.lmu.ifi.dbs.elki.result.textwriter.MultipleFilesOutput

Retrieve/open the default output stream.

getDefaultValue() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Returns the default value of the parameter.

getDefs() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Getter for definitions section

getDenseUnits() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique.CLIQUESubspace

getDensity(Vector) - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterface

Get the density of the given vector

getDensity(Vector) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Compute density for cluster model at given vector p-

getDensity(Vector) - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Get density at a given coordinate.

getDensity() - Method in class de.lmu.ifi.dbs.elki.math.statistics.KernelDensityEstimator

Retrieve density array (NO copy)

getDensityCorrection() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Return density correction factor

getDescendants(T) - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Delegate to hierarchy object

getDescendants() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Collect descendants

getDescendants(C, T) - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyImplementation

Collect descendants (recursive children)

getDescendants(T) - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyInterface

Collect descendants (recursive children)

getDescendants(C, T) - Method in class de.lmu.ifi.dbs.elki.data.cluster.SimpleHierarchy

Collect descendants.

getDescription() - Method in class de.lmu.ifi.dbs.elki.properties.PropertyDescription

Returns the description of the property.

getDescription(Class<?>) - Static method in class de.lmu.ifi.dbs.elki.utilities.documentation.DocumentationUtil

Get a class description if defined, an empty string otherwise.

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.AllOrNoneMustBeSetGlobalConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.DefaultValueGlobalConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.DistanceFunctionPatternConstraint

Deprecated.

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.EqualSizeGlobalConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.EqualStringConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalDistanceFunctionPatternConstraint

Deprecated.

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalListSizeConstraint

getDescription() - Method in interface de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalParameterConstraint

Returns a description of this global constraint.

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalVectorListElementSizeConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterEqualConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.IntervalConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessEqualConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessEqualGlobalConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.LessGlobalConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ListGreaterEqualConstraint

getDescription(String) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ListSizeConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.NotEqualValueGlobalConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.OneMustBeSetGlobalConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.OnlyOneIsAllowedToBeSetGlobalConstraint

getDescription(String) - Method in interface de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ParameterConstraint

Returns a description of this constraint.

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ParameterFlagGlobalConstraint

getDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID

Returns the description of this OptionID.

getDiagonal() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

getDiagonal returns array of diagonal-elements.

getDiff() - Method in class de.lmu.ifi.dbs.elki.math.DoubleMinMax

Return the difference between minimum and maximum.

getDim() - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterface

Get dimensionality of generated data

getDim() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Get the cluster dimensionality

getDim() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Get cluster dimensionality

getDimension() - Method in class de.lmu.ifi.dbs.elki.data.Interval

Returns the dimension of the interval in the original data space

getDimension() - Method in class de.lmu.ifi.dbs.elki.data.model.DimensionModel

Get cluster dimensionality

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.data.BitVector

The dimensionality of the binary vector space of which this BitVector is an element.

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector

getDimensionality() - Method in interface de.lmu.ifi.dbs.elki.data.FeatureVector

The dimensionality of the vector space where of this FeatureVector of V is an element.

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.data.FloatVector

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeNode

getDimensionality() - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialComparable

Returns the dimensionality of the object.

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry

getDimensionality() - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialNode

Returns the dimensionality of this spatial object.

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation

Query dimensionality of the transformation.

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector

Returns the dimensionality of this vector.

getDimensionality() - Method in class de.lmu.ifi.dbs.elki.utilities.HyperBoundingBox

Returns the dimensionality of this HyperBoundingBox.

getDimensions() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS.PROCLUSCluster

Returns the correlated dimensions of this cluster as BitSet.

getDimensions() - Method in class de.lmu.ifi.dbs.elki.data.model.SubspaceModel

Returns the BitSet that represents the dimensions of the subspace of this SubspaceModel.

getDimensions() - Method in class de.lmu.ifi.dbs.elki.data.Subspace

Returns the BitSet representing the dimensions of this subspace.

getDirCapacity() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

Returns the capacity of a directory node (= 1 + maximum number of entries in a directory node).

getDirMinimum() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

Returns the minimum number of entries in a directory node.

getDisableInteractions() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Get Batik disable default interactions flag.

getDiscarded() - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterfaceDynamic

Get number of discarded points

getDiscarded() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Get number of discarded points

getDiscarded() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Get number of discarded points

getDistance() - Method in class de.lmu.ifi.dbs.elki.database.DistanceResultPair

Getter for first

getDistance(int, int) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.KernelMatrix

Returns the kernel distance between the two specified objects.

getDistance() - Method in class de.lmu.ifi.dbs.elki.index.tree.DistanceEntry

Returns the distance value belonging to the entry.

getDistanceCache() - Method in class de.lmu.ifi.dbs.elki.parser.DistanceParsingResult

Returns the cache of precomputed distances between the database objects.

getDistanceFactory() - Method in class de.lmu.ifi.dbs.elki.algorithm.DistanceBasedAlgorithm

Returns the distance we use.

getDistanceFactory() - Method in class de.lmu.ifi.dbs.elki.distance.AbstractMeasurementFunction

getDistanceFactory() - Method in interface de.lmu.ifi.dbs.elki.distance.MeasurementFunction

Method to get the distance functions factory.

getDistanceFunction() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.ProjectedClustering

Returns the distance function.

getDistanceFunction() - Method in class de.lmu.ifi.dbs.elki.algorithm.DistanceBasedAlgorithm

Returns the distanceFunction.

getDistanceFunction() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.MetricalIndex

Returns the distance function of this metrical index.

getDistanceFunction() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree

getDistanceFunction() - Method in interface de.lmu.ifi.dbs.elki.parser.DistanceParser

Returns the distance function of this parser.

getDistanceFunction() - Method in class de.lmu.ifi.dbs.elki.parser.NumberDistanceParser

Returns the distance function of this parser.

getDistanceFunction() - Method in class de.lmu.ifi.dbs.elki.preprocessing.SharedNearestNeighborsPreprocessor

Returns the distance function used by the preprocessor.

getDocument() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Retrieve the SVG document.

getDoubleForEntry(ClusterOrderEntry<CorrelationDistance<?>>) - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSCorrelationDimensionalityDistance

getDoubleForEntry(ClusterOrderEntry<D>) - Method in interface de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSDistanceAdapter

Get the double value for plotting for a cluster order entry.

getDoubleForEntry(ClusterOrderEntry<NumberDistance<?, ?>>) - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSNumberDistance

getDoublePivot() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition

Return pivot permutation vector as a one-dimensional double array

getEigenPair(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs

Returns the eigenpair at the specified index.

getEigenPairFilter() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner

Retrieve the EigenPairFilter to be used.

getEigenPairs() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAResult

Returns a copy of the eigenpairs of the object to which this PCA belongs to in decreasing order.

getEigenvalue() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenPair

Returns the eigenvalue.

getEigenvalues() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAResult

Returns a copy of the eigenvalues of the object to which this PCA belongs to in decreasing order.

getEigenvector() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenPair

Returns the eigenvector.

getEigenvectors() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAResult

Returns a copy of the matrix of eigenvectors of the object to which this PCA belongs to.

getElementAt(int) - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

getElementAt(int) - Method in class de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile

Array access.

getEmptyPagesSize() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

getEntries() - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractNode

Returns a list of the entries.

getEntry(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractNode

getEntry() - Method in class de.lmu.ifi.dbs.elki.index.tree.DistanceEntry

Returns the entry of the Index.

getEntry(int) - Method in interface de.lmu.ifi.dbs.elki.index.tree.Node

Returns the entry at the specified index.

getEntry() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexPathComponent

Returns the entry of the component.

getEntry() - Method in class de.lmu.ifi.dbs.elki.properties.PropertyDescription

Returns the entry of the property.

getEpsilon() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering

Returns the value of SNNClustering.EPSILON_PARAM.

getEpsilon() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractPreferenceVectorBasedCorrelationDistanceFunction

Returns epsilon.

getEpsilon() - Method in class de.lmu.ifi.dbs.elki.preprocessing.DiSHPreprocessor

Returns the value of the epsilon parameter.

getErrors() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.AbstractParameterization

Get the configuration errors thrown in Parameterization.grab(de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter)

getErrors() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.MergedParameterization

getErrors() - Method in interface de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization

Get the configuration errors thrown in Parameterization.grab(de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter)

getErrors() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters

getErrors() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.UnParameterization

getEstimatedCoefficients() - Method in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression

Returns the estimated coefficients

getEstimatedResiduals() - Method in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression

Returns the estimated residuals

getEuclideanValue() - Method in class de.lmu.ifi.dbs.elki.distance.CorrelationDistance

Returns the euclidean distance between the objects.

getExpanded(SpatialEntry) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTree

Returns the nodes which are already expanded with the specified node.

getExpanded(DeLiCluNode) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTree

Returns the nodes which are already expanded with the specified node.

getExplainedVariance() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns explained variance

getExplanations(Database<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

Get explanations for points in the database.

getExtraHeaderSize() - Method in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Return the size of the extra header.

getFastRanking(Database<V>, int, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

Main part of the algorithm.

getFile() - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractPage

Returns the file that stores the pages.

getFile() - Method in class de.lmu.ifi.dbs.elki.persistent.PersistentPageFile

getFileName() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

getFilename() - Method in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Get the file name.

getFilenameExtension(File) - Static method in class de.lmu.ifi.dbs.elki.utilities.FileUtil

Returns the lower case extension of the selected file.

getFilenameExtension(String) - Static method in class de.lmu.ifi.dbs.elki.utilities.FileUtil

Returns the lower case extension of the selected file.

getFilePrefix(String) - Static method in class de.lmu.ifi.dbs.elki.utilities.Util

Returns the prefix of the specified fileName (i.e. the name of the file without extension).

getFirst() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair

Get first value

getFirst() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair

Get first value

getFirst() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair

Get first value

getFirst() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair

Get first value

getFirst() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair

Getter for first

getFirst() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

Getter for first

getFirstAssignments() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

Returns the assignmnets to the first routing object.

getFirstCoveringRadius() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

Returns the first covering radius.

getFirstDeap() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the first deap in the cache path.

getFirstFilteredResult(Class<C>) - Method in class de.lmu.ifi.dbs.elki.result.MultiResult

Return first results of the given restriction class

getFirstRoutingObject() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

Returns the id of the first routing object.

getFontFamily(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getFontFamily(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Get font family

getFormats() - Static method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog

getFullDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Returns the extended description of the option which includes the option's type, the short description and the default value (if specified).

getGenerics(K, Class<?>) - Method in class de.lmu.ifi.dbs.elki.utilities.AnyMap

(Largely) type checked get method for use with generic types

getGivenParameters() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters

Get the tracked parameters that were actually set.

getGivenValue() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Get the last given value.

getGlobalAlphaExtremum() - Method in class de.lmu.ifi.dbs.elki.data.ParameterizationFunction

Returns the alpha values of the extremum point in interval [(0,...,0), (Pi,...

getGlobalAssociation(AssociationID<T>) - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

Returns the global association specified by the given associationID.

getGlobalAssociation(AssociationID<T>) - Method in interface de.lmu.ifi.dbs.elki.database.Database

Returns the global association specified by the given associationID.

getGlobalAssociation(Result, AssociationID<M>) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Get first Association from a MultiResult.

getGlobalExtremum() - Method in class de.lmu.ifi.dbs.elki.data.ParameterizationFunction

Returns the global extremum of this function in interval [0,...

getGlobalExtremumType() - Method in class de.lmu.ifi.dbs.elki.data.ParameterizationFunction

Returns the type of the global extremum in interval [0,...

getGrandParent(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the grand parents.

getGreatestChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the greater child.

getGreatestChildAndGrandChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the greatest of the children and grand children.

getGreatestGrandChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the greatest grand child.

getGroup() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Access group object

getH() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.QRDecomposition

Return the Householder vectors

getHandler(Object) - Method in class de.lmu.ifi.dbs.elki.utilities.HandlerList

Find a matching handler for the given object

getHeader() - Method in class de.lmu.ifi.dbs.elki.persistent.PersistentPageFile

Get the header of this persistent page file.

getHeader() - Method in class de.lmu.ifi.dbs.elki.result.CollectionResult

Get header information

getHeight() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Returns the height of this R*-Tree.

getHeight() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotMap

Get height in plot units.

getHeight() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationInfo

Get the height

getHeight() - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

getHierarchy() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Get hierarchy object

getID() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the unique id of this interval.

getID() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.DeLiClu.SpatialObjectPair

Returns the unique id of this object.

getID() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS.COEntry

Returns the unique id of this object.

getID() - Method in class de.lmu.ifi.dbs.elki.data.AbstractDatabaseObject

getID() - Method in interface de.lmu.ifi.dbs.elki.data.DatabaseObject

Returns the unique id of this database object.

getID() - Method in class de.lmu.ifi.dbs.elki.database.DistanceResultPair

Getter for second element in pair

getID() - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractEntry

Returns the id of the node or data object that is represented by this entry.

getID() - Method in interface de.lmu.ifi.dbs.elki.index.tree.Entry

Returns the id of the node or data object that is represented by this entry.

getID() - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialObject

Returns the id of this spatial object.

getID() - Method in class de.lmu.ifi.dbs.elki.persistent.AbstractPage

Returns the unique id of this Page.

getID() - Method in interface de.lmu.ifi.dbs.elki.persistent.Page

Returns the unique id of this Page.

getID() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderEntry

Returns the object id of this entry.

getID() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.Deap

Returns the unique id of this Page.

getID() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultIdentifiable

Returns the unique id of this object.

getID() - Method in interface de.lmu.ifi.dbs.elki.utilities.Identifiable

Returns the unique id of this object.

getIdElement(String) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Get an element by its id.

getIDs() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the set of ids of the objects associated with this interval.

getIds() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique.CLIQUEUnit

Returns the ids of the feature vectors this unit contains.

getIDs() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Delegate to group.

getIDs() - Method in interface de.lmu.ifi.dbs.elki.data.DatabaseObjectGroup

Retrieve collection access to the IDs

getIDs() - Method in class de.lmu.ifi.dbs.elki.data.DatabaseObjectGroupArray

Retrieve the IDs as collection.

getIDs() - Method in class de.lmu.ifi.dbs.elki.data.DatabaseObjectGroupCollection

Retrieve the IDs as collection.

getIDs() - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

Returns a list of all ids currently in use in the database.

getIDs() - Method in interface de.lmu.ifi.dbs.elki.database.Database

Returns a list comprising all IDs currently in use.

getIDs() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.external.FileBasedDoubleDistanceFunction

Return a collection of all IDs in the cache.

getImagEigenvalues() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition

Return the imaginary parts of the eigenvalues

getIndex() - Method in class de.lmu.ifi.dbs.elki.database.IndexDatabase

Returns the underlying index structure.

getIndex() - Method in class de.lmu.ifi.dbs.elki.database.MetricalIndexDatabase

Returns the index of this database.

getIndex() - Method in class de.lmu.ifi.dbs.elki.database.SpatialIndexDatabase

Returns the index of this database.

getIndex() - Method in class de.lmu.ifi.dbs.elki.index.tree.DistanceEntry

Returns the index of this entry in its parents child array.

getIndex() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexPathComponent

Returns the index of the component in its parent.

getIndex() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.Deap

Returns the index of this deap in the persistent heap.

getIndexOf(V) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeap

Returns the current index of the specified value in this heap.

getIndexOf(V) - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.Heap

Returns the current index of the specified value in this heap.

getIndexOf(V) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the current index of the specified value in this heap.

getIndexOf(V) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the current index of the specified value in this heap.

getIndexOfMaximum(double[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.Util

Returns the index of the maximum of the given values.

getIndicesOfNotNullValues() - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

Provides a list containing the indices (dimensions) with a value other than zero.

getInput() - Method in class de.lmu.ifi.dbs.elki.application.StandAloneInputApplication

Returns the input file.

getInputDescription() - Method in class de.lmu.ifi.dbs.elki.application.StandAloneInputApplication

Returns the description for the input parameter.

getInternalErrors() - Method in exception de.lmu.ifi.dbs.elki.utilities.optionhandling.InternalParameterizationErrors

getInterval(Integer) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique.CLIQUEUnit

Returns the interval of the specified dimension.

getIntervals() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique.CLIQUEUnit

Returns a sorted set of the intervals of which this unit is build.

getInverse() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation

Get a copy of the inverse matrix

getInvertedRows() - Method in class de.lmu.ifi.dbs.elki.data.model.BiclusterWithInverted

Provides a copy of the inverted column IDs.

getIterableResult(Database<O>, Result) - Method in class de.lmu.ifi.dbs.elki.evaluation.roc.ComputeROCCurve

Find an "iterable" result that looks like object IDs.

getIterableResults(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Return all Iterable results

getJPEGQuality() - Method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

Returns the quality value in the quality field.

getK() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.ProjectedClustering

Returns the value of ProjectedClustering.K_PARAM.

getK() - Method in class de.lmu.ifi.dbs.elki.data.KNNList

Returns the maximum size of this list.

getK() - Method in class de.lmu.ifi.dbs.elki.preprocessing.HiSCPreprocessor

Returns the value of the k parameter (i.e. the number of nearest neighbors considered to determine the preference vector).

getK_0() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ApproximationLine

Returns the start value for k.

getK_i() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.ProjectedClustering

Returns the value of ProjectedClustering.K_I_PARAM.

getK_max() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTree

Returns the value of the k_max parameter.

getK_max() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTree

Returns the value of the k_max parameter.

getK_max() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabDirectoryEntry

getK_max() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabEntry

Returns the parameter k_max.

getK_max() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabLeafEntry

getK_max() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.MkTreeHeader

Returns the parameter k.

getKernel() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.KernelMatrix

Get the kernel matrix.

getKey() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeapNode

Returns the key of this heap node.

getKey() - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.HeapNode

Returns the key of this HeapNode.

getKNN(Database<V>, Integer) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD

Provides the k nearest neighbors in terms of the shared nearest neighbor distance.

getKNNDistance() - Method in class de.lmu.ifi.dbs.elki.data.KNNList

Returns the k-th distance of this list (e.g. the key of the k-th element).

getKnnDistance() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxDirectoryEntry

getKnnDistance() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxEntry

Returns the knn distance of the entry.

getKnnDistance() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxLeafEntry

getKnnDistance(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabDirectoryEntry

getKnnDistance(int) - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabEntry

Returns the knn distance of the entry for the specified parameter k.

getKnnDistance(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabLeafEntry

getKnnDistance() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNDirectoryEntry

getKnnDistance() - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNEntry

Returns the knn distance of this entry.

getKnnDistance() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNLeafEntry

getKnnDistanceApproximation() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppDirectoryEntry

Returns the polynomial approximation.

getKnnDistanceApproximation() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppEntry

Returns the polynomial approximation.

getKnnDistanceApproximation() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppLeafEntry

Returns the polynomial approximation.

getKnnDistances() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabDirectoryEntry

getKnnDistances() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabEntry

Returns the list of knn distances of the entry.

getKnnDistances() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabLeafEntry

getKNNList(Integer, Map<Integer, KNNList<D>>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTree

getKnownImplementations() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter

Get an iterator over all known implementations of the class restriction.

getL() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.ProjectedClustering

Returns the value of ProjectedClustering.L_PARAM..

getL() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.CholeskyDecomposition

Return triangular factor.

getL() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition

Return lower triangular factor

getLabel() - Method in class de.lmu.ifi.dbs.elki.database.AssociationID

Return the name formatted for use in text serialization

getLastDeap() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the last deap in the cache path.

getLastPathComponent() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexPath

Returns the last component of this path.

getLeafCapacity() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

Returns the capacity of a leaf node (= 1 + maximum number of entries in a leaf node).

getLeafMinimum() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader

Returns the minimum number of entries in a leaf node.

getLeafNodes(N, List<E>, int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Determines the entries pointing to the leaf nodes of the specified subtree

getLeastEnlargement(N, HyperBoundingBox) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Returns the path information of the entry of the specified node with the least enlargement if the given mbr would be inserted into.

getLeaves() - Method in class de.lmu.ifi.dbs.elki.database.SpatialIndexDatabase

Returns a list of the leaf nodes of the underlying spatial index of this database.

getLeaves() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Returns a list of entries pointing to the leaf nodes of this spatial index.

getLeaves() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialIndex

Returns a list of entries pointing to the leaf nodes of this spatial index.

getLeftChild() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the left child of this interval.

getLeftChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the left child.

getLes() - Method in class de.lmu.ifi.dbs.elki.data.model.LinearEquationModel

Get assigned Linear Equation System

getLevel() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the level of this interval.

getLineStyleLibrary() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext

Convenience method to get the current line style library, or use a default.

getLineWidth(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getLineWidth(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Get line width

getListCellRendererComponent(JList, Object, int, boolean, boolean) - Method in class de.lmu.ifi.dbs.elki.application.visualization.KNNExplorer.ExplorerWindow.SeriesLabelRenderer

getListSize() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ListParameter

Returns the size of this list parameter.

getLocalities(Set<Integer>, Database<V>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS

Computes the localities of the specified medoids.

getLog10Res() - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Get resolution (scale interval size)

getLogger(Class<?>) - Static method in class de.lmu.ifi.dbs.elki.logging.Logging

Retrieve logging utility for a particular class.

getLogger(String) - Static method in class de.lmu.ifi.dbs.elki.logging.Logging

Retrieve logging utility for a particular class.

getLogicalPageAccess() - Method in class de.lmu.ifi.dbs.elki.database.IndexDatabase

Returns the logical page access of this database.

getLogicalPageAccess() - Method in interface de.lmu.ifi.dbs.elki.index.Index

Returns the logical page access of this index.

getLogicalPageAccess() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

getLogicalPageAccess() - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile

Returns the logical read I/O-Accesses of this file.

getLogicalPageAccess() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the logical read I/O-access of this heap.

getLowerHull() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull

Returns the lower hull.

getM() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ApproximationLine

Returns the incline.

getM() - Method in class de.lmu.ifi.dbs.elki.math.statistics.LinearRegression

getMarkerLibrary() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext

Convenience method to get the current marker

getMaterialized() - Method in class de.lmu.ifi.dbs.elki.preprocessing.MaterializeKNNPreprocessor

Materialize a neighborhood.

getMatrix(int, int, int, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Get a submatrix.

getMatrix(int[], int[]) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Get a submatrix.

getMatrix(int, int, int[]) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Get a submatrix.

getMatrix(int[], int, int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Get a submatrix.

getMatrixSize() - Method in class de.lmu.ifi.dbs.elki.persistent.OnDiskUpperTriangleMatrix

Query the size of the matrix.

getMax(int) - Method in class de.lmu.ifi.dbs.elki.data.AbstractNumberVector

Get Maximum - implementation of the SpatialComparable interface

getMax() - Method in class de.lmu.ifi.dbs.elki.data.Interval

Returns the maximum (right) value of the interval.

getMax() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.UniformDistribution

getMax(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeNode

getMax(int) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialComparable

Returns the maximum coordinate at the specified dimension.

getMax(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

getMax(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry

getMax() - Method in class de.lmu.ifi.dbs.elki.math.DoubleMinMax

Get the current maximum.

getMax() - Method in class de.lmu.ifi.dbs.elki.math.MinMax

Get the current maximum.

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.HyperBoundingBox

Returns a clone of the maximum hyper point.

getMax(int) - Method in class de.lmu.ifi.dbs.elki.utilities.HyperBoundingBox

Returns the coordinate at the specified dimension of the maximum hyper point

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.ClipScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.IdentityScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.MinusLogScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierGammaScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierMinusLogScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling

getMax() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.TopKOutlierScaling

getMax() - Method in interface de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction

Get maximum resulting value.

getMax() - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Get maximum value (scale, not data).

getMaximumDistance() - Method in class de.lmu.ifi.dbs.elki.data.KNNList

Returns the maximum distance of this list (e.g. the key of the last element).

getMaxNode() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Retrieves and removes the maximum node of this heap.

getMaxRef() - Method in class de.lmu.ifi.dbs.elki.utilities.ModifiableHyperBoundingBox

Returns the reference to the maximum hyper point.

getMaxSorting() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.TopologicalSplit

Returns the entries to be split sorted according to their max values of their MBRs.

getMaxSplitDimension() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the maximum split dimension.

getMBR() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

getMBR() - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry

Returns the MBR of the underlying spatial object of this entry.

getMBR() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry

getMean() - Method in class de.lmu.ifi.dbs.elki.data.model.MeanModel

getMean() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.NormalDistribution

getMean() - Method in class de.lmu.ifi.dbs.elki.math.MeanVariance

Return mean

getMeanKNNList(List<Integer>, Map<Integer, KNNList<D>>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTree

getMessage() - Method in class de.lmu.ifi.dbs.elki.logging.progress.ProgressLogRecord

Generate the message only when needed.

getMetadata() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualizer

getMetadata() - Method in interface de.lmu.ifi.dbs.elki.visualization.visualizers.Visualizer

Get visualization meta data, such as dimensions visualized.

getMin(int) - Method in class de.lmu.ifi.dbs.elki.data.AbstractNumberVector

Get Minimum - implementation of the SpatialComparable interface

getMin() - Method in class de.lmu.ifi.dbs.elki.data.Interval

Returns the minimum (left) value of the interval.

getMin() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.UniformDistribution

getMin(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeNode

getMin(int) - Method in interface de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialComparable

Returns the minimum coordinate at the specified dimension.

getMin(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry

getMin(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry

getMin() - Method in class de.lmu.ifi.dbs.elki.math.DoubleMinMax

Get the current minimum.

getMin() - Method in class de.lmu.ifi.dbs.elki.math.MinMax

Get the current minimum.

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.HyperBoundingBox

Returns a clone of the minimum hyper point.

getMin(int) - Method in class de.lmu.ifi.dbs.elki.utilities.HyperBoundingBox

Returns the coordinate at the specified dimension of the minimum hyper point

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.ClipScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.IdentityScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.MinusLogScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierGammaScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierMinusLogScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling

getMin() - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.TopKOutlierScaling

getMin() - Method in interface de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction

Get minimum resulting value.

getMin() - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Get minimum value (scale, not data).

getMinNode() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeap

Retrieves and removes the minimum node of this heap.

getMinNode() - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.Heap

Retrieves and removes the minimum node of this heap.

getMinNode() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Retrieves and removes the minimum node of this heap.

getMinNode() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Retrieves and removes the minimum node of this heap.

getMinpts() - Method in class de.lmu.ifi.dbs.elki.preprocessing.DiSHPreprocessor

Returns minpts.

getMinRef() - Method in class de.lmu.ifi.dbs.elki.utilities.ModifiableHyperBoundingBox

Returns a reference to the minimum hyper point.

getMinSorting() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.TopologicalSplit

Returns the entries to be split sorted according to their min values of their MBRs.

getModel() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Access model object

getName() - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult

getName() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Get Cluster name.

getName() - Method in class de.lmu.ifi.dbs.elki.data.Clustering

getName() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

getName() - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterface

Get cluster name

getName() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Get cluster name.

getName() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Get cluster name

getName() - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

getName() - Method in class de.lmu.ifi.dbs.elki.result.AnnotationFromDatabase

getName() - Method in class de.lmu.ifi.dbs.elki.result.AnnotationFromHashMap

getName() - Method in class de.lmu.ifi.dbs.elki.result.AprioriResult

getName() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult.ClusterOrderAdapter

getName() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult

getName() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult.PredecessorAdapter

getName() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult.ReachabilityDistanceAdapter

getName() - Method in class de.lmu.ifi.dbs.elki.result.CollectionResult

getName() - Method in class de.lmu.ifi.dbs.elki.result.HistogramResult

getName() - Method in class de.lmu.ifi.dbs.elki.result.IDResult

getName() - Method in class de.lmu.ifi.dbs.elki.result.KNNDistanceOrderResult

getName() - Method in class de.lmu.ifi.dbs.elki.result.MultiResult

getName() - Method in class de.lmu.ifi.dbs.elki.result.OrderingFromAssociation

getName() - Method in class de.lmu.ifi.dbs.elki.result.OrderingFromHashMap

getName() - Method in class de.lmu.ifi.dbs.elki.result.ReferencePointsResult

getName() - Method in interface de.lmu.ifi.dbs.elki.result.Result

Get a user-understandable name for this result.

getName() - Method in class de.lmu.ifi.dbs.elki.result.SettingsResult

getName() - Method in class de.lmu.ifi.dbs.elki.utilities.ConstantObject

Returns the name of the ConstantObject.

getName() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Returns the name of the option.

getName() - Method in class de.lmu.ifi.dbs.elki.visualization.colors.ListBasedColorLibrary

Get the color scheme name.

getName() - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Get the class name.

getName() - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

Get the style scheme name.

getNameAt(int) - Method in class de.lmu.ifi.dbs.elki.data.HierarchicalClassLabel

Returns the name at the given level as a String.

getNameAutomatic() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Return either the assigned name or the suggested label

getNameFor(Object) - Method in interface de.lmu.ifi.dbs.elki.data.cluster.naming.NamingScheme

Retrieve a name for the given cluster.

getNameFor(Object) - Method in class de.lmu.ifi.dbs.elki.data.cluster.naming.SimpleEnumeratingScheme

Retrieve the cluster name.

getNeighbors(O) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction

Wrapper to handle objects not preprocessed with a cache for performance.

getNewRandomGenerator() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Create a new random generator (reproducible)

getNextEmptyPageID() - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile

Returns the next empty page id.

getNextPageID() - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile

Returns the next page id.

getNode(int) - Method in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters

Get the node in this nth row of the flattened tree.

getNode(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

Returns the node with the specified id.

getNode(E) - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

Returns the node that is represented by the specified entry.

getNodeAt(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeap

Returns the node at the specified index.

getNodeAt(int) - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.Heap

Returns the node at the specified index.

getNodeAt(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns an element of the heap by the index.

getNodeAt(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the node at the specified index.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree.MTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar.RStarTree

Return the node base class.

getNodeClass() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

Get the node class of this index

getNormalization() - Method in class de.lmu.ifi.dbs.elki.result.ResultWriter

Getter for normalization

getNormalization() - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriter

Getter for normalization

getNormalization() - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStreamNormalizing

Getter for normalization class.

getNormalizedLinearEquationSystem(Normalization<V>) - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

Returns the linear equation system for printing purposes.

getNumberOfNativeColors() - Method in interface de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary

Return the number of native colors available.

getNumberOfNativeColors() - Method in class de.lmu.ifi.dbs.elki.visualization.colors.ListBasedColorLibrary

getNumberOfNeighbors() - Method in class de.lmu.ifi.dbs.elki.preprocessing.SharedNearestNeighborsPreprocessor

Returns the number of nearest neighbors considered

getNumberOfPointsInLowerHull() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull

Returns the number of points in lower hull

getNumberOfPointsInUpperHull() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull

Returns the number of points in upper hull

getNumberOfRepresentations() - Method in class de.lmu.ifi.dbs.elki.data.MultiRepresentedObject

Returns the number of representations.

getNumBins() - Method in class de.lmu.ifi.dbs.elki.data.images.AbstractComputeColorHistogram

Get the number of bins.

getNumBins() - Method in class de.lmu.ifi.dbs.elki.data.images.ComputeHSBColorHistogram

getNumBins() - Method in class de.lmu.ifi.dbs.elki.data.images.ComputeNaiveHSBColorHistogram

getNumBins() - Method in class de.lmu.ifi.dbs.elki.data.images.ComputeNaiveRGBColorHistogram

getNumBins() - Method in class de.lmu.ifi.dbs.elki.math.FlexiHistogram

getNumBins() - Method in class de.lmu.ifi.dbs.elki.math.ReplacingHistogram

Get the number of bins actually in use.

getNumEntries() - Method in class de.lmu.ifi.dbs.elki.index.tree.AbstractNode

getNumEntries() - Method in interface de.lmu.ifi.dbs.elki.index.tree.Node

Returns the number of entries of this node.

getNumRecords() - Method in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Get number of records in file.

getObjectAndLabelList() - Method in class de.lmu.ifi.dbs.elki.parser.ParsingResult

Returns the list of database objects and labels associated with these objects.

getObjectIDs() - Method in class de.lmu.ifi.dbs.elki.database.DatabaseEvent

Returns the database object that have been changed.

getObjects(List<Pair<O, Associations>>) - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

Helper method to extract the list of database objects from the specified list of objects and their associations.

getObjectsByLabelMatch(Database<?>, Pattern) - Static method in class de.lmu.ifi.dbs.elki.utilities.DatabaseUtil

Find object by matching their labels.

getOptionID(String) - Static method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID

Returns the OptionID for the given name if it exists, null otherwise.

getOptionID() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Return the OptionID of this option.

getOrCreateAssociationID(String, Class<C>) - Static method in class de.lmu.ifi.dbs.elki.database.AssociationID

Gets or creates the AssociationID for the given name and given type.

getOrCreateAssociationIDGenerics(String, Class<?>) - Static method in class de.lmu.ifi.dbs.elki.database.AssociationID

Gets or creates the AssociationID for the given name and given type.

getOrCreateDefaultClustering() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext

Convenience method to get the clustering to use, and fall back to a default "clustering".

getOrCreateOptionID(String, String) - Static method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID

Gets or creates the OptionID for the given class and given name.

getOrCreatePropertyName(Class<?>) - Static method in class de.lmu.ifi.dbs.elki.properties.PropertyName

Gets the PropertyName for the given class named as the classes name if it exists, creates and returns it otherwise.

getOrdering() - Method in class de.lmu.ifi.dbs.elki.result.outlier.OutlierResult

Get the outlier ordering

getOrderingResults(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Collect all ordering results from a Result

getOutlierMeta() - Method in class de.lmu.ifi.dbs.elki.result.outlier.OutlierResult

Get the outlier score meta data

getOutlierResult(Database<O>, Result) - Method in class de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram

Find an OutlierResult to work with.

getOutlierResults(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Collect all outlier results from a Result

getOutput() - Method in class de.lmu.ifi.dbs.elki.application.StandAloneApplication

Returns the output string.

getOutputDescription() - Method in class de.lmu.ifi.dbs.elki.application.GeneratorXMLSpec

Describe wrapper output.

getOutputDescription() - Method in class de.lmu.ifi.dbs.elki.application.StandAloneApplication

Returns the description for the output parameter.

getOwner() - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Get class owner.

getPageAccess() - Method in interface de.lmu.ifi.dbs.elki.persistent.Cache

Returns the number of page accesses.

getPageAccess() - Method in class de.lmu.ifi.dbs.elki.persistent.LRUCache

Returns the number of page accesses.

getPageSize() - Method in class de.lmu.ifi.dbs.elki.persistent.DefaultPageHeader

Returns the size of a page in Bytes.

getPageSize() - Method in interface de.lmu.ifi.dbs.elki.persistent.PageHeader

Returns the size of a page in Bytes.

getPairGenerator(R) - Static method in class de.lmu.ifi.dbs.elki.evaluation.paircounting.PairCountingFMeasure

Get a pair generator for the given Clustering

getParameters() - Method in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

getParameters() - Method in class de.lmu.ifi.dbs.elki.database.MetricalIndexDatabase

getParameters() - Method in class de.lmu.ifi.dbs.elki.database.SequentialDatabase

getParameters() - Method in class de.lmu.ifi.dbs.elki.database.SpatialIndexDatabase

getParams() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.LevenbergMarquardtMethod

Get current parameters.

getParent(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the parent of the element at the specified index.

getParent(Object) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters

Traverse the tree upwards.

getParentDistance() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry

Returns the distance from the routing object of this entry to its parent's routing object.

getParentDistance() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry

Returns the distance from the routing object of this entry to the routing object of its parent.

getParentDistance() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry

Returns the distance from the underlying data object to its parent's routing object.

getParentPath() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexPath

Returns a path containing all the elements of this object, except the last path component.

getParents() - Method in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Delegate to hierarchy object

getParents(C) - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyImplementation

Get parents list.

getParents() - Method in interface de.lmu.ifi.dbs.elki.data.cluster.HierarchyInterface

Get parents list.

getParents(C) - Method in class de.lmu.ifi.dbs.elki.data.cluster.SimpleHierarchy

Return parents

getPartitionAlgorithm() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.COPAC

Returns the partition algorithm.

getPath() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexPath

Returns an ordered list of IndexPathComponents containing the components of this IndexPath.

getPathComponent() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.Enlargement

Returns the path information of the entry representing the node.

getPathComponent(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexPath

Returns the path component at the specified index.

getPathCount() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndexPath

Returns the number of elements in the path.

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.AbstractDistance

Get the pattern accepted by this distance

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.BitDistance

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.PCACorrelationDistance

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.DoubleDistance

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.FloatDistance

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.IntegerDistance

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.PreferenceVectorBasedCorrelationDistance

getPattern() - Method in class de.lmu.ifi.dbs.elki.distance.SubspaceDistance

getPCAResult() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationModel

Get assigned PCA result

getPhysicalReadAccess() - Method in class de.lmu.ifi.dbs.elki.database.IndexDatabase

Returns the physical read access of this database.

getPhysicalReadAccess() - Method in interface de.lmu.ifi.dbs.elki.index.Index

Returns the physical read access of this index.

getPhysicalReadAccess() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

getPhysicalReadAccess() - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile

Returns the physical read I/O-Accesses of this file.

getPhysicalReadAccess() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the physical read I/O-access of this heap.

getPhysicalWriteAccess() - Method in interface de.lmu.ifi.dbs.elki.index.Index

Returns the physical write access of this index.

getPhysicalWriteAccess() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

getPhysicalWriteAccess() - Method in class de.lmu.ifi.dbs.elki.persistent.PageFile

Returns the physical write I/O-Accesses of this file.

getPhysicalWriteAccess() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.PersistentHeap

Returns the physical write I/O-access of this heap.

getPhysicalWriteReadAccess() - Method in class de.lmu.ifi.dbs.elki.database.IndexDatabase

Returns the physical write access of this database.

getPivot() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition

Return pivot permutation vector

getPlot() - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas

Get the currently displayed SVG plot.

getPlot() - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

Get the OPTICS plot.

getPoints() - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterface

Get points.

getPoints() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Return the list of points (no copy)

getPoints() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Get cluster points

getPolynomialOrder() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.PolynomialApproximation

Returns the order of the polynom.

getPredecessorID() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderEntry

Returns the id of the predecessor of this entry if this entry has a predecessor, null otherwise.

getPreprocessor() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractPreprocessorBasedDistanceFunction

Get the preprocessor of this handler

getPreprocessor() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.AbstractPreprocessorBasedSimilarityFunction

Get the preprocessor managed by this handler

getPreprocessor() - Method in class de.lmu.ifi.dbs.elki.preprocessing.PreprocessorHandler

Returns the preprocessor.

getPreprocessorDescription() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractLocallyWeightedDistanceFunction

getPreprocessorDescription() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction

getPreprocessorDescription() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction

getPreprocessorDescription() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractPreferenceVectorBasedCorrelationDistanceFunction

getPreprocessorDescription() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction

getPreprocessorDescription() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction

getPreprocessorDescription() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction

getPreprocessorDescription() - Method in interface de.lmu.ifi.dbs.elki.preprocessing.PreprocessorClient

Returns the description for the preprocessor parameter.

getPreprocessorSuperClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractLocallyWeightedDistanceFunction

getPreprocessorSuperClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction

getPreprocessorSuperClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction

getPreprocessorSuperClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractPreferenceVectorBasedCorrelationDistanceFunction

getPreprocessorSuperClass() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction

getPreprocessorSuperClass() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction

getPreprocessorSuperClass() - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction

getPreprocessorSuperClass() - Method in interface de.lmu.ifi.dbs.elki.preprocessing.PreprocessorClient

Returns the super class for the preprocessor parameter.

getProbClusterIGivenX(Integer) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.EM

Get the probabilities for a given point.

getProcessed() - Method in class de.lmu.ifi.dbs.elki.logging.progress.AbstractProgress

Get the number of items already processed at a time being.

getProgress() - Method in class de.lmu.ifi.dbs.elki.logging.progress.ProgressLogRecord

Get the objects progress.

getProgresses() - Method in class de.lmu.ifi.dbs.elki.logging.progress.ProgressTracker

Get a list of progresses tracked.

getProgressiveKnnDistanceApproximation() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPLeafEntry

Returns the progressive approximation line.

getProperty(PropertyName) - Method in class de.lmu.ifi.dbs.elki.properties.Properties

Provides the entries (as separated by PROPERTY_SEPARATOR) for a specified PropertyName.

getPropertyName(String) - Static method in class de.lmu.ifi.dbs.elki.properties.PropertyName

Returns the PropertyName for the given name if it exists, null otherwise.

getPropertyNames() - Method in class de.lmu.ifi.dbs.elki.properties.Properties

Get a collection of all property names in this file.

getPropertyValue(String, String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

Retrieve the property value for a particular path + type pair.

getProvidedVisualizers() - Method in interface de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.AlgorithmAdapter

Returns a collection of Visualizers this adapter generally provides.

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.ClusteringAdapter

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.ClusterOrderAdapter

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.CurveAdapter

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.DefaultAdapter

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.HistogramAdapter

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.OutlierScoreAdapter

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.ReferencePointsAdapter

getProvidedVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.RStarTreeAdapter

getQ() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.QRDecomposition

Generate and return the (economy-sized) orthogonal factor

getR() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.QRDecomposition

Return the upper triangular factor

getRangeDouble(V) - Static method in class de.lmu.ifi.dbs.elki.data.VectorUtil

Return the range across all dimensions.

getRanking(Database<V>, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD

Main part of the algorithm.

getRatio() - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

Get width-to-height ratio of image.

getReachability() - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderEntry

Returns the reachability distance of this entry

getRealEigenvalues() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition

Return the real parts of the eigenvalues

getRecordsize() - Method in class de.lmu.ifi.dbs.elki.persistent.OnDiskArray

Get the size of a single record.

getReference(Class<?>) - Static method in class de.lmu.ifi.dbs.elki.utilities.documentation.DocumentationUtil

Get the reference annotation of a class, or null.

getReferencePoints(Database<O>) - Method in class de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints

getReferencePoints(Database<O>) - Method in class de.lmu.ifi.dbs.elki.utilities.referencepoints.FullDatabaseReferencePoints

getReferencePoints(Database<O>) - Method in class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

getReferencePoints(Database<O>) - Method in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints

getReferencePoints(Database<O>) - Method in class de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomSampleReferencePoints

getReferencePoints(Database<O>) - Method in interface de.lmu.ifi.dbs.elki.utilities.referencepoints.ReferencePointsHeuristic

Get the reference points for the given database.

getReferencePoints(Database<O>) - Method in class de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints

getRelativeCoordinates(Event, Element) - Static method in class de.lmu.ifi.dbs.elki.visualization.batikutil.BatikUtil

Get the relative coordinates of a point within the coordinate system of a particular SVG Element.

getRelativeScaled(double) - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Covert a relative value to it's scale position

getRelativeUnscaled(double) - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Covert a relative scale position to the actual value

getRemainingParameters() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization

Return the yet unused parameters.

getRemainingParameters() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization

Return the yet unused parameters.

getRepresentation(int) - Method in class de.lmu.ifi.dbs.elki.data.MultiRepresentedObject

Returns the ith representation of this object

getRes() - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Get resolution (scale interval size)

getReservedPages() - Method in class de.lmu.ifi.dbs.elki.persistent.DefaultPageHeader

Returns the number of pages necessary for the header

getReservedPages() - Method in interface de.lmu.ifi.dbs.elki.persistent.PageHeader

Returns the number of pages necessary for the header

getRestrictionClass() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter

Returns the restriction class of this class parameter.

getRestrictionClasses() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassListParameter

Returns the class names allowed according to the restriction class of this parameter.

getRestrictionClasses() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter

Returns the class names allowed according to the restriction class of this class parameter.

getResult() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU

Returns the result of the algorithm.

getResult() - Method in class de.lmu.ifi.dbs.elki.KDDTask

Get the algorithms result.

getResult() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext

Get the full result object

getResults() - Method in class de.lmu.ifi.dbs.elki.result.MultiResult

Retrieve result array.

getRetries() - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterfaceDynamic

Retrieve remaining number of retries.

getRetries() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Return number of remaining retries.

getRHS() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Returns a copy of the right hand side of this linear equation system.

getRightChild() - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash.CASHInterval

Returns the right child of this interval.

getRightChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the right child.

getRkNNStatistics() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTree

Returns the statistic for performed rknn queries.

getRkNNStatistics() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTree

Returns the statistic for performed rknn queries.

getRoot() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

Reads the root node of this index from the file.

getRoot() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Getter for root element.

getRootEntry() - Method in class de.lmu.ifi.dbs.elki.database.SpatialIndexDatabase

Returns the id of the root of the underlying index.

getRootEntry() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

Returns the entry representing the root if this index.

getRootPath() - Method in class de.lmu.ifi.dbs.elki.index.tree.TreeIndex

Returns the path to the root of this tree.

getRoutingObjectID() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeDirectoryEntry

Returns the id of the routing object of this entry.

getRoutingObjectID() - Method in interface de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry

Returns the id of the underlying database object of this entry, if this entry is a leaf entry, the id of the routing object, otherwise.

getRoutingObjectID() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeLeafEntry

Returns the id of the underlying data object of this entry.

getRoutingObjectID() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.util.PQNode

Returns the id of the routing object.

getRow(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the ith row of this matrix.

getRowCount() - Method in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel

getRowDimensionality() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the dimensionality of the rows of this matrix.

getRowPackedCopy() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Make a one-dimensional row packed copy of the internal array.

getRowPermutations() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem

Returns a copy of the row permutations, row i is at position row[i].

getRowVector() - Method in class de.lmu.ifi.dbs.elki.data.BitVector

Returns a Matrix representing in one row and getDimensionality() columns the values of this BitVector as double values.

getRowVector() - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector

getRowVector() - Method in class de.lmu.ifi.dbs.elki.data.FloatVector

getRowVector() - Method in interface de.lmu.ifi.dbs.elki.data.NumberVector

Returns a Matrix representing in one row and getDimensionality() columns the values of this NumberVector of V.

getRowVector() - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

getRowVector(int) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix

Returns the ith row of this matrix as vector.

getS() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition

Return the diagonal matrix of singular values

getScale() - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

getScale(int) - Method in class de.lmu.ifi.dbs.elki.visualization.VisualizationProjection

Get the scales used, for rendering scales mostly.

getScale() - Method in class de.lmu.ifi.dbs.elki.visualization.VisualizationProjection

Global scaling function.

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.ClipScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.IdentityScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.MinusLogScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MinusLogStandardDeviationScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierGammaScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierMinusLogScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.TopKOutlierScaling

getScaled(double) - Method in interface de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction

Transform a given value using the scaling function.

getScaled(double) - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Covert a value to it's scale position

getScaledForId(int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.BubbleVisualizer

Convenience method to apply scalings in the right order.

getScaleValue(Database<?>, OutlierResult) - Static method in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling

Compute the scaling value in a linear scan over the annotation.

getScores() - Method in class de.lmu.ifi.dbs.elki.result.outlier.OutlierResult

Get the outlier scores association.

getSecond() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair

Get second value

getSecond() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.DoubleIntPair

Get second value

getSecond() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntDoublePair

Get second value

getSecond() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair

Get second value

getSecond() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Pair

Getter for second element in pair

getSecond() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

Getter for second element in triple

getSecondAssignments() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

Returns the assignmnets to the second routing object.

getSecondCoveringRadius() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

Returns the second covering radius.

getSecondRoutingObject() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split.Assignments

Returns the id of the second routing object.

getSelectedAttributes() - Method in class de.lmu.ifi.dbs.elki.parser.meta.ProjectionParser

Provides a BitSet with the bits set to true corresponding to the selected attributes in ProjectionParser.SELECTED_ATTRIBUTES_PARAM.

getSelectedDimension() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DimensionSelectingDistanceFunction

Returns the selected dimension.

getSelectedDimensions() - Method in class de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractDimensionsSelectingDoubleDistanceFunction

Returns a bit set representing the selected dimensions.

getSelectedFormat() - Method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SaveOptionsPanel

Return the selected file format.

getSelectedItem() - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

getSettings() - Method in class de.lmu.ifi.dbs.elki.result.SettingsResult

Get the settings

getSettingsResults(Result) - Static method in class de.lmu.ifi.dbs.elki.result.ResultUtil

Collect all settings results from a Result

getShortDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Returns the short description of the option.

getSimilarity(int, int) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.KernelMatrix

Returns the kernel value of object o1 and object o2

getSimilarityMatrix() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

Returns the similarity matrix of the pca.

getSingularValues() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition

Return the one-dimensional array of singular values

getSize() - Method in interface de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorInterface

Get number of points to be generated by this generator.

getSize() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Return the size

getSize() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorStatic

Get cluster size

getSize() - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel

getSize(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getSize(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Get generic size

getSmallestChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the smaller child.

getSmallestChildAndGrandChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the smallest of the children and grand children.

getSmallestGrandChild(int) - Method in class de.lmu.ifi.dbs.elki.utilities.heap.MinMaxHeap

Returns the index of the smallest grand child.

getSod() - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODModel

Return the SOD of the point.

getSolution() - Method in class de.lmu.ifi.dbs.elki.result.AprioriResult

Returns the frequent item sets.

getSortedEntries(N, Integer) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree

Sorts the entries of the specified node according to their minimum distance to the specified object.

getSortedEntries(N, Integer[]) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree

Sorts the entries of the specified node according to their minimum distance to the specified objects.

getSortedEntries(N, List<Integer>) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTree

Sorts the entries of the specified node according to their minimum distance to the specified objects.

getSortedEntries(N, Integer, SpatialDistanceFunction<O, D>) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Sorts the entries of the specified node according to their minimum distance to the specified object.

getSortedEntries(N, Collection<Integer>, SpatialDistanceFunction<O, D>) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Sorts the entries of the specified node according to their minimum distance to the specified objects.

getSourceClassName() - Method in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord

getSourceMethodName() - Method in class de.lmu.ifi.dbs.elki.logging.ELKILogRecord

getSpatialDatabase(Database<O>) - Method in class de.lmu.ifi.dbs.elki.preprocessing.SpatialApproximationMaterializeKNNPreprocessor

Do some (limited) type checking, then cast the database into a spatial database.

getSplitAxis() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.TopologicalSplit

Returns the split axis.

getSplitPoint() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.TopologicalSplit

Returns the split point.

getSquaredDistance(int, int) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.KernelMatrix

Returns the squared kernel distance between the two specified objects.

getStandardDeviation() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

Returns the standard deviation of the distances of the objects belonging to the hyperplane underlying this solution.

getStartObject(SpatialIndexDatabase<O, DeLiCluNode, DeLiCluEntry>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.DeLiClu

Returns the id of the start object for the run method.

getStatement(String) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClass

Get the current value of a particular CSS statement.

getStddev() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution.NormalDistribution

getStddev() - Method in class de.lmu.ifi.dbs.elki.math.MeanVariance

Return standard deviation

getStrongEigenPairs() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FilteredEigenPairs

Returns the strong eigenpairs (no copy).

getStrongEigenvalues() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns a copy of the strong eigenvalues of the object after passing the eigen pair filter.

getStrongEigenvectors() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

Returns a copy of the strong eigenvectors.

getStrongEigenvectors() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns a copy of the matrix of strong eigenvectors after passing the eigen pair filter.

getStyle() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Deprecated. Contents will be overwritten by CSS class manager!

getStyleLibrary() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext

Get the style library

getSubColumn(int, List<Integer>) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.KernelMatrix

Returns the ith kernel matrix column for all objects in ids

getSubMatrix(Collection<Integer>) - Method in class de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.KernelMatrix

Returns a sub kernel matrix for all objects in ids

getSubspace() - Method in class de.lmu.ifi.dbs.elki.data.model.SubspaceModel

Returns the subspace of this SubspaceModel.

getSubspaceDistance() - Method in class de.lmu.ifi.dbs.elki.distance.SubspaceDistance

Returns the value of the subspace distance.

getSumOfSquareResiduals() - Method in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression

Returns the sum of square residuals.

getSumOfSquaresTotal() - Method in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression

Returns the sum of squares total.

getSupports() - Method in class de.lmu.ifi.dbs.elki.result.AprioriResult

Returns the frequencies of the frequent item sets.

getSynchronizedRunner() - Method in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer

Get the current update runner.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassListParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DistanceParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DoubleListParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DoubleParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileListParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag

A flag has no syntax, since it doesn't take extra options

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntListParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.LongParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectListParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Returns a string representation of the parameter's type (e.g. an IntParameter should return <int>).

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.PatternParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Returns a string representation of the parameter's type.

getSyntax() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.VectorListParameter

Returns a string representation of the parameter's type.

getT() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ApproximationLine

Returns the axes intercept.

getT() - Method in class de.lmu.ifi.dbs.elki.math.statistics.LinearRegression

getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.AdjustingEditor

getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.DropdownEditor

getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.FileNameEditor

Apply the Editor for a selected option.

getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParameterTable.ColorfolRenderer

getTask() - Method in class de.lmu.ifi.dbs.elki.logging.progress.AbstractProgress

Provides the name of the task.

getTextColor(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getTextColor(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Retrieve text color for an item

getTextSize(String) - Method in class de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary

getTextSize(String) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary

Get text size

getTheoreticalBaseline() - Method in class de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta

getTheoreticalBaseline() - Method in interface de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta

Get the theoretical baseline of the value range.

getTheoreticalBaseline() - Method in class de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore

getTheoreticalMaximum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta

getTheoreticalMaximum() - Method in interface de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta

Get the theoretical maximum of the value range.

getTheoreticalMaximum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore

getTheoreticalMinimum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta

getTheoreticalMinimum() - Method in interface de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta

Get the theoretical minimum of the value range.

getTheoreticalMinimum() - Method in class de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore

getThird() - Method in class de.lmu.ifi.dbs.elki.utilities.pairs.Triple

Getter for third

getThumbnailIfGenerated() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationInfo

Access the existing thumbnail, or null.

getTitle(Class<?>) - Static method in class de.lmu.ifi.dbs.elki.utilities.documentation.DocumentationUtil

Get a useful title from a class, either by reading the "title" annotation, or by using the class name.

getTitle(Database<? extends DatabaseObject>, MultiResult) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizersForResult

Try to automatically generate a title for this.

getToplevelClusters() - Method in class de.lmu.ifi.dbs.elki.data.Clustering

Return top level clusters

getTotal() - Method in class de.lmu.ifi.dbs.elki.logging.progress.FiniteProgress

Get the final value for the progress.

getTrans() - Method in class de.lmu.ifi.dbs.elki.data.synthetic.bymodel.GeneratorSingleCluster

Get transformation

getTransformation() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation

Get a copy of the transformation matrix

getType() - Method in class de.lmu.ifi.dbs.elki.database.AssociationID

Returns the type of the AssociationID.

getType() - Method in class de.lmu.ifi.dbs.elki.properties.PropertyName

Returns the type of the PropertyName.

getU() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.LUDecomposition

Return upper triangular factor

getU() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition

Return the left singular vectors

getUnscaled(double) - Method in class de.lmu.ifi.dbs.elki.visualization.scales.LinearScale

Covert a scale position to the actual value

getUpdateRunner() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot

Get the plots update runner.

getUpperHull() - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull

Returns the upper hull.

getUsableVisualizers(VisualizerContext) - Method in interface de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.AlgorithmAdapter

Returns a collection of Visualizers this adapter provides, depending on the given database and result.

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.ClusteringAdapter

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.ClusterOrderAdapter

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.CurveAdapter

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.DefaultAdapter

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.HistogramAdapter

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.OutlierScoreAdapter

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.ReferencePointsAdapter

getUsableVisualizers(VisualizerContext) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.adapter.RStarTreeAdapter

getV() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.EigenvalueDecomposition

Return the eigenvector matrix

getV() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition

Return the right singular vectors

getValue(int) - Method in class de.lmu.ifi.dbs.elki.data.BitVector

Returns the value in the specified dimension.

getValue(int) - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector

Returns the value of the specified attribute.

getValue(int) - Method in interface de.lmu.ifi.dbs.elki.data.FeatureVector

Returns the value in the specified dimension.

getValue(int) - Method in class de.lmu.ifi.dbs.elki.data.FloatVector

getValue(int) - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

getValue() - Method in class de.lmu.ifi.dbs.elki.distance.BitDistance

getValue() - Method in class de.lmu.ifi.dbs.elki.distance.DoubleDistance

getValue() - Method in class de.lmu.ifi.dbs.elki.distance.FloatDistance

getValue() - Method in class de.lmu.ifi.dbs.elki.distance.IntegerDistance

getValue() - Method in class de.lmu.ifi.dbs.elki.distance.NumberDistance

Returns the value of this NumberDistance.

getValue() - Method in class de.lmu.ifi.dbs.elki.utilities.heap.DefaultHeapNode

Returns the value of this heap node.

getValue() - Method in interface de.lmu.ifi.dbs.elki.utilities.heap.HeapNode

Returns the value of this HeapNode.

getValue() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Returns the value of the option.

getValue(int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d.TooltipVisualizer

Returns the outlierness-score for a given ID.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassListParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DistanceParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DoubleListParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DoubleParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileListParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntListParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.LongParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.PatternParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter

Get the value as string.

getValueAsString() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.VectorListParameter

Get the value as string.

getValueAt(int, int) - Method in class de.lmu.ifi.dbs.elki.gui.util.ParametersModel

getValueAt(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.PolynomialApproximation

Returns the function value of the polynoial approximation at the specified k.

getValueAt(int) - Method in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ApproximationLine

Returns the function value of the approximation line at the specified k.

getValueFor(Integer) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.SOD.SODProxyScoreResult

getValueFor(Integer) - Method in class de.lmu.ifi.dbs.elki.result.AnnotationFromDatabase

getValueFor(Integer) - Method in class de.lmu.ifi.dbs.elki.result.AnnotationFromHashMap

getValueFor(Integer) - Method in interface de.lmu.ifi.dbs.elki.result.AnnotationResult

Get associated value for an object.

getValueFor(Integer) - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult.PredecessorAdapter

getValueFor(Integer) - Method in class de.lmu.ifi.dbs.elki.result.ClusterOrderResult.ReachabilityDistanceAdapter

getValueFor(Integer) - Method in class de.lmu.ifi.dbs.elki.result.IDResult

getValues() - Method in class de.lmu.ifi.dbs.elki.data.DoubleVector

Get a copy of the raw double[] array.

getValues() - Method in class de.lmu.ifi.dbs.elki.data.SparseFloatVector

Returns an array consisting of the values of this feature vector.

getValues(O) - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree

Returns a double array consisting of the values of the specified real vector.

getValues() - Method in class de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialLeafEntry

Returns the values of the underlying data object of this entry.

getValuesDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter

Return a description of known valid classes.

getValuesDescription() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

Return a string explaining valid values.

getVariance() - Method in class de.lmu.ifi.dbs.elki.math.MeanVariance

Return variance

getVariance() - Method in class de.lmu.ifi.dbs.elki.math.statistics.KernelDensityEstimator

Retrieve variance/quality array (NO copy)

getVariance() - Method in class de.lmu.ifi.dbs.elki.math.statistics.MultipleLinearRegression

Returns the error variance.

getVisibleFormats() - Static method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog

getVisualization() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationInfo

getVisualization() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationLabel

getVisualization() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationProjectedInfo

getVisualization() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationUnprojectedInfo

getVisualizers() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizersForResult

Get the visualizers found.

getWeakEigenPairs() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FilteredEigenPairs

Returns the weak eigenpairs (no copy).

getWeakEigenvalues() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns a copy of the weak eigenvalues of the object after passing the eigen pair filter.

getWeakEigenvectors() - Method in class de.lmu.ifi.dbs.elki.data.model.CorrelationAnalysisSolution

Returns a copy of the weak eigenvectors.

getWeakEigenvectors() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult

Returns a copy of the matrix of weak eigenvectors after passing the eigen pair filter.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ConstantWeight

Get the constant weight No scaling - the result is always 1.0

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ErfcStddevWeight

Return Erfc weight, scaled by standard deviation. max is ignored.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ErfcWeight

Get Erfc Weight, using distance / max. stddev is ignored.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ExponentialStddevWeight

Get exponential weight, max is ignored.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ExponentialWeight

Exponential Weight function. stddev is not used.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussStddevWeight

Get Gaussian Weight using standard deviation for scaling. max is ignored.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussWeight

Get Gaussian weight. stddev is not used, scaled using max.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.InverseLinearWeight

Linear increasing weight, from 0.1 to 1.0 NOTE: increasing weights are non-standard, and mostly for testing

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.InverseProportionalStddevWeight

Get inverse proportional weight. max is ignored.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.InverseProportionalWeight

Get inverse proportional weight. stddev is ignored.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.LinearWeight

Linear decreasing weight, from 1.0 to 0.1.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.QuadraticStddevWeight

Evaluate weight function at given parameters. max is ignored.

getWeight(double, double, double) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.QuadraticWeight

Evaluate quadratic weight. stddev is ignored.

getWeight(double, double, double) - Method in interface de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.WeightFunction

Evaluate weight function with given parameters.

getWidth() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotMap

Get width in plot units

getWidth() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.overview.VisualizationInfo

Get the width

getWidth() - Method in class de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot

getWrappedLogger() - Method in class de.lmu.ifi.dbs.elki.logging.Logging

getWriterFor(Object) - Method in class de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream

Retrieve an appropriate writer from the handler list.

givenValue - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter

The value last passed to this option.

globalAssociations - Variable in class de.lmu.ifi.dbs.elki.database.AbstractDatabase

Map to hold global associations.

GlobalDistanceFunctionPatternConstraint<D extends DistanceFunction<?,?>> - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Deprecated. Use DistanceParameter instead.

GlobalDistanceFunctionPatternConstraint(StringParameter, ClassParameter<D>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalDistanceFunctionPatternConstraint

Deprecated. Constructs a global parameter constraint for testing if a given pattern parameter is a valid argument for a given distance function of a class parameter.

GlobalListSizeConstraint - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Represents a global parameter constraint for testing if the size of the list parameter (ListParameter) given is equal to the constraint size specified by the integer parameter (IntParameter) given.

GlobalListSizeConstraint(ListParameter<?>, IntParameter) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalListSizeConstraint

Creates a List-Size global parameter constraint.

GlobalParameterConstraint - Interface in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Interface for specifying global parameter constraints, i.e. constraints addressing several parameters.

GlobalVectorListElementSizeConstraint - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Global parameter constraint for testing if the dimensions of each vector specified by a given vector list parameter (VectorListParameter) correspond to the value of a integer parameter (IntParameter) given.

GlobalVectorListElementSizeConstraint(VectorListParameter, IntParameter) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GlobalVectorListElementSizeConstraint

Constructs a global vector size constraint.

GMOD_PROB - Static variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianModel

Association ID for the Gaussian model outlier probability

grab(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.AbstractParameterization

grab(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.MergedParameterization

grab(Parameter<?, ?>) - Method in interface de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization

Get the option value from the Parameterization.

grab(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.TrackParameters

grab(Parameter<?, ?>) - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.UnParameterization

gradients - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.fitting.FittingFunctionResult

Parameter gradients at the given coordinate

GreaterConstraint - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Represents a parameter constraint for testing if the value of the number parameter (NumberParameter) tested is greater than the specified constraint value.

GreaterConstraint(Number) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterConstraint

Creates a Greater-Than-Number parameter constraint.

GreaterEqualConstraint - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints

Represents a Greater-Equal-Than-Number parameter constraint.

GreaterEqualConstraint(Number) - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterEqualConstraint

Creates a Greater-Equal parameter constraint.

greedy(Set<Integer>, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS

Returns a piercing set of k medoids from the specified sample set.

GRID_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

OptionID for GridBasedReferencePoints.GRID_PARAM

GRID_PARAM - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

Parameter to specify the grid resolution.

GRID_SCALE_ID - Static variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

OptionID for GridBasedReferencePoints.GRID_SCALE_PARAM

GRID_SCALE_PARAM - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

Parameter to specify the extra scaling of the space, to allow out-of-data-space reference points.

GridBasedReferencePoints<O extends NumberVector<O,?>> - Class in de.lmu.ifi.dbs.elki.utilities.referencepoints

Grid-based strategy to pick reference points.

GridBasedReferencePoints(Parameterization) - Constructor for class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

Constructor, adhering to Parameterizable

gridres - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

Holds the value of GridBasedReferencePoints.GRID_PARAM.

gridscale - Variable in class de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints

Holds the value of GridBasedReferencePoints.GRID_SCALE_PARAM.

ground - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.TopKOutlierScaling

The "ground" value

group - Variable in class de.lmu.ifi.dbs.elki.data.cluster.Cluster

Cluster data.

GSCALE - Static variable in class de.lmu.ifi.dbs.elki.math.statistics.GaussianKernelDensityFunction

Scaling constant for Gaussian kernel, to make it sum up to 1.

guessFormat(String) - Static method in class de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog

Guess a supported format from the file name.

guessObjectClass(Database<O>) - Static method in class de.lmu.ifi.dbs.elki.utilities.DatabaseUtil

Do a cheap guess at the databases object class.

gzip - Variable in class de.lmu.ifi.dbs.elki.result.ResultWriter

Whether or not to do gzip compression on output.

GZIP_EXTENSION - Static variable in class de.lmu.ifi.dbs.elki.result.textwriter.MultipleFilesOutput

GZip extra file extension

GZIP_FLAG - Variable in class de.lmu.ifi.dbs.elki.result.ResultWriter

Flag to control GZIP compression.

GZIP_OUTPUT - Variable in class de.lmu.ifi.dbs.elki.result.ResultWriter

GZIP compression flag.