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U

u - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull
Number of points in upper hull.
u - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem
Holds the space of solutions of the homogeneous linear equation system.
U - Variable in class de.lmu.ifi.dbs.elki.math.linearalgebra.SingularValueDecomposition
Arrays for internal storage of U and V.
ubound - Variable in class de.lmu.ifi.dbs.elki.algorithm.outlier.distance.HilOut.HilFeature
Upper bound for object
uglyCastIntoSubclass(Class<D>) - Static method in class de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil
Cast the (erased) generics onto a class.
uglyCrossCast(Class<FROM>, Class<BASE>) - Static method in class de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil
This class performs an ugly cast, from Class<F> to Class<T>, where both F and T need to extend B.
UKMeans - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.uncertain
Uncertain K-Means clustering, using the average deviation from the center.
UKMeans(int, int, RandomFactory) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.clustering.uncertain.UKMeans
Constructor.
UKMeans.Parameterizer - Class in de.lmu.ifi.dbs.elki.algorithm.clustering.uncertain
Parameterization class.
umadapter - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer
Adapter to track component changes
UMAdapter() - Constructor for class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer.UMAdapter
Constructor.
UnableToComplyException - Exception in de.lmu.ifi.dbs.elki.utilities.exceptions
General Exception to state inability to execute an operation.
UnableToComplyException() - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException
Exception to state inability to execute an operation.
UnableToComplyException(String) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException
Exception to state inability to execute an operation.
UnableToComplyException(String, Throwable) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException
Exception to state inability to execute an operation.
UnableToComplyException(Throwable) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.exceptions.UnableToComplyException
Exception to state inability to execute an operation.
uncenteredCorrelation(NumberVector, NumberVector) - Static method in class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.UncenteredCorrelationDistanceFunction
Compute the uncentered correlation of two vectors.
UncenteredCorrelationDistanceFunction - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.correlation
Uncentered correlation distance.
UncenteredCorrelationDistanceFunction() - Constructor for class de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.UncenteredCorrelationDistanceFunction
Deprecated.
Use static instance!
UncenteredCorrelationDistanceFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.distance.distancefunction.correlation
Parameterization class.
UNCERTAIN_OBJECT_FIELD - Static variable in class de.lmu.ifi.dbs.elki.data.type.TypeUtil
Uncertain objects.
UncertainBoundingBoxVisualization - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain
Visualize uncertain objects by their bounding box.
UncertainBoundingBoxVisualization() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain.UncertainBoundingBoxVisualization
Constructor.
UncertainBoundingBoxVisualization.Instance - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain
Instance.
Uncertainifier<UO extends UncertainObject> - Interface in de.lmu.ifi.dbs.elki.data.uncertain.uncertainifier
Class to derive uncertain object from exact vectors.
UncertainifyFilter<UO extends UncertainObject> - Class in de.lmu.ifi.dbs.elki.datasource.filter.typeconversions
Filter class to transform a database containing vector fields (TODO I need to express this more correctly) into a database containing UncertainObject fields.
UncertainifyFilter(Uncertainifier<UO>, boolean, RandomFactory) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.typeconversions.UncertainifyFilter
Constructor.
UncertainifyFilter.Parameterizer<UO extends UncertainObject> - Class in de.lmu.ifi.dbs.elki.datasource.filter.typeconversions
Parameterization class.
UncertainInstancesVisualization - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain
Visualize a single derived sample from an uncertain database.
UncertainInstancesVisualization() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain.UncertainInstancesVisualization
Constructor.
UncertainInstancesVisualization.Instance - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain
Instance.
UNCERTAINITY_MODEL_ID - Static variable in class de.lmu.ifi.dbs.elki.datasource.filter.typeconversions.UncertainifyFilter.Parameterizer
Parameter to specify the uncertainityModel used for the uncertainification.
UncertainObject - Interface in de.lmu.ifi.dbs.elki.data.uncertain
Interface for uncertain objects.
UncertainSamplesVisualization - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain
Visualize uncertain objects by multiple samples.
UncertainSamplesVisualization() - Constructor for class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain.UncertainSamplesVisualization
Constructor.
UncertainSamplesVisualization.Instance - Class in de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.uncertain
Instance.
UncertainSplitFilter - Class in de.lmu.ifi.dbs.elki.datasource.filter.typeconversions
Filter to transform a single vector into a set of samples to interpret as uncertain observation.
UncertainSplitFilter(int) - Constructor for class de.lmu.ifi.dbs.elki.datasource.filter.typeconversions.UncertainSplitFilter
Constructor.
UncertainSplitFilter.Parameterizer - Class in de.lmu.ifi.dbs.elki.datasource.filter.typeconversions
Parameterization class.
UNCLUSTERED - Static variable in class de.lmu.ifi.dbs.elki.evaluation.clustering.pairsegments.Segment
Object is not clustered
UNDEFINED_DISTANCE - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.optics.FastOPTICS
undefined value for (reachability/average) distance
unflip(int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.density.DensityEstimationOverlay.Instance
 
unhomogeneRelativeVector(Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation
Project an homogeneous vector back into the original space.
unhomogeneRelativeVector(double[]) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation
Project an homogeneous vector back into the original space.
unhomogeneVector(Vector) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation
Project an homogeneous vector back into the original space.
unhomogeneVector(double[]) - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation
Project an homogeneous vector back into the original space.
UniformContinuousUncertainObject - Class in de.lmu.ifi.dbs.elki.data.uncertain
Continuous uncertain object model using a uniform distribution on the bounding box.
UniformContinuousUncertainObject(SpatialComparable) - Constructor for class de.lmu.ifi.dbs.elki.data.uncertain.UniformContinuousUncertainObject
Constructor.
UniformContinuousUncertainObject.Factory - Class in de.lmu.ifi.dbs.elki.data.uncertain
Factory class for this data type.
UniformDistribution - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution
Uniform distribution.
UniformDistribution(double, double, RandomFactory) - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.distribution.UniformDistribution
Constructor for a uniform distribution on the interval [min, max[
UniformDistribution(double, double, Random) - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.distribution.UniformDistribution
Constructor for a uniform distribution on the interval [min, max[
UniformDistribution(double, double) - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.distribution.UniformDistribution
Constructor for a uniform distribution on the interval [min, max[
UniformDistribution.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution
Parameterization class
UniformEnhancedMinMaxEstimator - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Slightly improved estimation, that takes sample size into account and enhances the interval appropriately.
UniformEnhancedMinMaxEstimator() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator.UniformEnhancedMinMaxEstimator
Constructor.
UniformEnhancedMinMaxEstimator.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Parameterization class.
UniformKernelDensityFunction - Class in de.lmu.ifi.dbs.elki.math.statistics.kernelfunctions
Uniform / Rectangular kernel density estimator.
UniformKernelDensityFunction() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.kernelfunctions.UniformKernelDensityFunction
Private, empty constructor.
UniformKernelDensityFunction.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.statistics.kernelfunctions
Parameterization stub.
UniformLMMEstimator - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Estimate the parameters of a normal distribution using the method of L-Moments (LMM).
UniformLMMEstimator() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator.UniformLMMEstimator
Constructor.
UniformLMMEstimator.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Parameterization class.
UniformMADEstimator - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Estimate Uniform distribution parameters using Median and MAD.
UniformMADEstimator() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator.UniformMADEstimator
Private constructor, use static instance!
UniformMADEstimator.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Parameterization class.
UniformMinMaxEstimator - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Estimate the uniform distribution by computing min and max.
UniformMinMaxEstimator() - Constructor for class de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator.UniformMinMaxEstimator
Constructor.
UniformMinMaxEstimator.Parameterizer - Class in de.lmu.ifi.dbs.elki.math.statistics.distribution.estimator
Parameterization class.
UniformUncertainifier - Class in de.lmu.ifi.dbs.elki.data.uncertain.uncertainifier
Factory class.
UniformUncertainifier(double, double, boolean) - Constructor for class de.lmu.ifi.dbs.elki.data.uncertain.uncertainifier.UniformUncertainifier
Constructor.
UniformUncertainifier.Parameterizer - Class in de.lmu.ifi.dbs.elki.data.uncertain.uncertainifier
Parameterizer class.
unifySegment(Segment) - Method in class de.lmu.ifi.dbs.elki.evaluation.clustering.pairsegments.Segments
 
union(Relation<V>, DistanceQuery<V>, ORCLUS<V>.ORCLUSCluster, ORCLUS<V>.ORCLUSCluster, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS
Returns the union of the two specified clusters.
union(SpatialComparable, SpatialComparable) - Static method in class de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil
Computes the union HyperBoundingBox of two SpatialComparables.
union(DBIDs, DBIDs) - Static method in class de.lmu.ifi.dbs.elki.database.ids.DBIDUtil
Returns the union of the two specified collection of IDs.
unionDBIDs(DBIDs[], int, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.P3C
Compute the union of multiple DBID sets.
unionFlatMBR(A, ArrayAdapter<E, ? super A>) - Static method in class de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil
Compute the union of a number of objects as a flat MBR (low-level, for index structures).
unionSize(BitVector) - Method in class de.lmu.ifi.dbs.elki.data.BitVector
Compute the vector union size.
unionSize(long, long) - Static method in class de.lmu.ifi.dbs.elki.utilities.BitsUtil
Compute the union size of two Bitsets.
unionSize(long[], long[]) - Static method in class de.lmu.ifi.dbs.elki.utilities.BitsUtil
Compute the union size of two Bitsets.
unionTolerant(SpatialComparable, SpatialComparable) - Static method in class de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil
Returns the union of the two specified MBRs.
unique - Variable in class de.lmu.ifi.dbs.elki.datasource.parser.CategorialDataAsNumberVectorParser
For String unification.
unique - Variable in class de.lmu.ifi.dbs.elki.datasource.parser.NumberVectorLabelParser
For String unification.
Unique<E> - Class in de.lmu.ifi.dbs.elki.utilities.datastructures.hash
This hash set is designed to keep only a unique copy of each object (hence its name).
Unique() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.hash.Unique
Constructor with default size and load factors.
Unique(int) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.hash.Unique
Constructor with desired initial size.
Unique(int, float) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.hash.Unique
Constructor with desired initial size, and with the specified load factor.
unitMatrix(int) - Static method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix
Returns the unit matrix of the specified dimension.
unitMatrix(int) - Static method in class de.lmu.ifi.dbs.elki.math.linearalgebra.VMath
Returns the unit matrix of the specified dimension.
unitVector(int, int) - Static method in class de.lmu.ifi.dbs.elki.math.linearalgebra.Vector
Returns the ith unit vector of the specified dimensionality.
unitVector(int, int) - Static method in class de.lmu.ifi.dbs.elki.math.linearalgebra.VMath
Returns the ith unit vector of the specified dimensionality.
univariateStandardization(double[]) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.normalization.instancewise.InstanceMeanVarianceNormalization
 
UNIX_NEWLINE - Static variable in class de.lmu.ifi.dbs.elki.logging.OutputStreamLogger
Unix newline
unmapByteBuffer(MappedByteBuffer) - Static method in class de.lmu.ifi.dbs.elki.utilities.io.ByteArrayUtil
Unmap a byte buffer.
UnmodifiableArrayDBIDs - Class in de.lmu.ifi.dbs.elki.database.ids.generic
Unmodifiable wrapper for DBIDs.
UnmodifiableArrayDBIDs(ArrayDBIDs) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.generic.UnmodifiableArrayDBIDs
Constructor.
UnmodifiableArrayDBIDs.UnmodifiableDBIDArrayIter - Class in de.lmu.ifi.dbs.elki.database.ids.generic
Make an existing DBIDMIter unmodifiable.
UnmodifiableDBIDArrayIter(DBIDArrayIter) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.generic.UnmodifiableArrayDBIDs.UnmodifiableDBIDArrayIter
Constructor.
UnmodifiableDBIDIter(DBIDIter) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.generic.UnmodifiableDBIDs.UnmodifiableDBIDIter
Constructor.
UnmodifiableDBIDIter(IntegerDBIDArrayIter) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.integer.UnmodifiableIntegerArrayDBIDs.UnmodifiableDBIDIter
Constructor.
UnmodifiableDBIDIter(IntegerDBIDIter) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.integer.UnmodifiableIntegerDBIDs.UnmodifiableDBIDIter
Constructor.
UnmodifiableDBIDs - Class in de.lmu.ifi.dbs.elki.database.ids.generic
Unmodifiable wrapper for DBIDs.
UnmodifiableDBIDs(DBIDs) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.generic.UnmodifiableDBIDs
Constructor.
UnmodifiableDBIDs.UnmodifiableDBIDIter - Class in de.lmu.ifi.dbs.elki.database.ids.generic
Make an existing DBIDMIter unmodifiable.
UnmodifiableIntegerArrayDBIDs - Class in de.lmu.ifi.dbs.elki.database.ids.integer
Unmodifiable wrapper for DBIDs.
UnmodifiableIntegerArrayDBIDs(IntegerArrayDBIDs) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.integer.UnmodifiableIntegerArrayDBIDs
Constructor.
UnmodifiableIntegerArrayDBIDs.UnmodifiableDBIDIter - Class in de.lmu.ifi.dbs.elki.database.ids.integer
Make an existing DBIDMIter unmodifiable.
UnmodifiableIntegerDBIDs - Class in de.lmu.ifi.dbs.elki.database.ids.integer
Unmodifiable wrapper for DBIDs.
UnmodifiableIntegerDBIDs(IntegerDBIDs) - Constructor for class de.lmu.ifi.dbs.elki.database.ids.integer.UnmodifiableIntegerDBIDs
Constructor.
UnmodifiableIntegerDBIDs.UnmodifiableDBIDIter - Class in de.lmu.ifi.dbs.elki.database.ids.integer
Make an existing DBIDMIter unmodifiable.
unorderedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.Heap
Get an unordered heap iterator.
UnorderedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.Heap.UnorderedIter
Constructor.
unorderedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.TiedTopBoundedHeap
Get an unordered heap iterator.
UnorderedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.TiedTopBoundedHeap.UnorderedIter
Constructor.
UnParameterization - Class in de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization
Parameterization handler that doesn't set any parameters.
UnParameterization() - Constructor for class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.UnParameterization
 
UNPROCESSED - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.gdbscan.GeneralizedDBSCAN.Instance
Unprocessed IDs
UNPROCESSED - Static variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.gdbscan.LSDBC
Constants used internally.
UNQUEUE(ThumbnailThread.Task) - Static method in class de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailThread
Remove a pending task from the queue.
unselectedObjects - Variable in class de.lmu.ifi.dbs.elki.visualization.visualizers.pairsegments.SegmentsStylingPolicy
Not selected IDs that will be drawn in default colors.
unset() - Method in interface de.lmu.ifi.dbs.elki.database.ids.DBIDVar
Clear the contents.
unset() - Method in class de.lmu.ifi.dbs.elki.database.ids.integer.IntegerDBIDVar
 
unsetEpsilon() - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotCutVisualization.Instance
Reset the epsilon value.
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparableMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparableMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparableMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparableMinHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparatorMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparatorMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparatorMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ComparatorMinHeap.UnsortedIter
 
unsortedIter() - Method in interface de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleHeap
Get an unsorted iterator to inspect the heap.
unsortedIter() - Method in interface de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleIntegerHeap
Get an unsorted iterator to inspect the heap.
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleIntegerMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleIntegerMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleIntegerMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleIntegerMinHeap.UnsortedIter
 
unsortedIter() - Method in interface de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleLongHeap
Get an unsorted iterator to inspect the heap.
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleLongMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleLongMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleLongMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleLongMinHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleMinHeap.UnsortedIter
 
unsortedIter() - Method in interface de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleObjectHeap
Get an unsorted iterator to inspect the heap.
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleObjectMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleObjectMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleObjectMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.DoubleObjectMinHeap.UnsortedIter
 
unsortedIter() - Method in interface de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerHeap
Get an unsorted iterator to inspect the heap.
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerMinHeap.UnsortedIter
 
unsortedIter() - Method in interface de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerObjectHeap
Get an unsorted iterator to inspect the heap.
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerObjectMaxHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerObjectMaxHeap.UnsortedIter
 
unsortedIter() - Method in class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerObjectMinHeap
 
UnsortedIter() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.IntegerObjectMinHeap.UnsortedIter
 
unsortedIter() - Method in interface de.lmu.ifi.dbs.elki.utilities.datastructures.heap.ObjectHeap
Get an unsorted iterator to inspect the heap.
UnspecifiedParameterException - Exception in de.lmu.ifi.dbs.elki.utilities.optionhandling
Exception when a required parameter was not given.
UnspecifiedParameterException(Parameter<?>) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnspecifiedParameterException
Constructor with missing Parameter
unstandardized(double[][]) - Method in class de.lmu.ifi.dbs.elki.math.statistics.tests.StandardizedTwoSampleAndersonDarlingTest
Compute the non-standardized A2 test statistic for the k-samples test.
unstandardized(double[][], int) - Method in class de.lmu.ifi.dbs.elki.math.statistics.tests.StandardizedTwoSampleAndersonDarlingTest
Compute the non-standardized A2 test statistic for the k-samples test.
unstandardized(double[], double[]) - Method in class de.lmu.ifi.dbs.elki.math.statistics.tests.StandardizedTwoSampleAndersonDarlingTest
Compute the non-standardized A2 test statistic for the k-samples test.
UNSUPPORTED - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages
Generic "unsupported" message
UNSUPPORTED_NOT_YET - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages
Generic "not yet supported" message
UNSUPPORTED_REMOVE - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages
"remove unsupported" message for iterators
UNSUPPORTED_UNDEFINED_DISTANCE - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages
Message when a distance doesn't support undefined values.
UnsynchronizedLongCounter - Class in de.lmu.ifi.dbs.elki.logging.statistics
Class to count events in a thread-safe counter.
UnsynchronizedLongCounter(String) - Constructor for class de.lmu.ifi.dbs.elki.logging.statistics.UnsynchronizedLongCounter
Constructor.
unsynchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot
Detach from synchronization.
unsynchronizeWith(UpdateSynchronizer) - Method in class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner
Remove an update synchronizer
UnusedParameterException - Exception in de.lmu.ifi.dbs.elki.utilities.optionhandling
Thrown by OptionHandler in case of request of an unused parameter.
UnusedParameterException(String) - Constructor for exception de.lmu.ifi.dbs.elki.utilities.optionhandling.UnusedParameterException
Thrown by OptionHandler in case of request of an unused parameter.
UnweightedDiscreteUncertainifier - Class in de.lmu.ifi.dbs.elki.data.uncertain.uncertainifier
Class to generate unweighted discrete uncertain objects.
UnweightedDiscreteUncertainifier(Uncertainifier<?>, int, int) - Constructor for class de.lmu.ifi.dbs.elki.data.uncertain.uncertainifier.UnweightedDiscreteUncertainifier
Constructor.
UnweightedDiscreteUncertainifier.Parameterizer - Class in de.lmu.ifi.dbs.elki.data.uncertain.uncertainifier
Parameterization class.
UnweightedDiscreteUncertainObject - Class in de.lmu.ifi.dbs.elki.data.uncertain
Unweighted implementation of discrete uncertain objects.
UnweightedDiscreteUncertainObject(DoubleVector[]) - Constructor for class de.lmu.ifi.dbs.elki.data.uncertain.UnweightedDiscreteUncertainObject
Constructor.
UnweightedDiscreteUncertainObject.Factory - Class in de.lmu.ifi.dbs.elki.data.uncertain
Factory class for this data type.
UnweightedNeighborhoodAdapter - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted
Adapter to use unweighted neighborhoods in an algorithm that requires weighted neighborhoods.
UnweightedNeighborhoodAdapter(NeighborSetPredicate) - Constructor for class de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted.UnweightedNeighborhoodAdapter
Constructor.
UnweightedNeighborhoodAdapter.Factory<O> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted
Factory class
UnweightedNeighborhoodAdapter.Factory.Parameterizer<O> - Class in de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted
Parameterization class.
UP - Static variable in class de.lmu.ifi.dbs.elki.visualization.svg.SVGArrow
Constant for "up"
UpdatableDatabase - Interface in de.lmu.ifi.dbs.elki.database
Database API with updates.
UpdatableHeap<O> - Class in de.lmu.ifi.dbs.elki.utilities.datastructures.heap
A heap as used in OPTICS that allows updating entries.
UpdatableHeap() - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap
Simple constructor with default size.
UpdatableHeap(int) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap
Constructor with predefined size.
UpdatableHeap(Comparator<? super O>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap
Constructor with comparator.
UpdatableHeap(int, Comparator<? super O>) - Constructor for class de.lmu.ifi.dbs.elki.utilities.datastructures.heap.UpdatableHeap
Constructor with predefined size and comparator.
update() - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI.SettingsComboboxModel
Force an update.
update() - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel.SettingsComboboxModel
Force an update
update() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow
Refresh the overview
update(Result) - Method in class de.lmu.ifi.dbs.elki.workflow.EvaluationStep.Evaluation
Update on a particular result.
updateAssignment(DBIDIter, List<? extends ModifiableDBIDs>, WritableIntegerDataStore, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.AbstractKMeans
 
updateAssignment(DBIDIter, V, List<? extends ModifiableDBIDs>, WritableIntegerDataStore, double[][], int[], int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansBatchedLloyd
Update the assignment of a single object.
updateAssignment(DBIDIter, List<? extends ModifiableDBIDs>, WritableIntegerDataStore, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.uncertain.UKMeans
Update the cluster assignment.
updateBounds(Relation<V>, WritableIntegerDataStore, WritableDoubleDataStore, WritableDataStore<double[]>, double[]) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansElkan
Update the bounds for k-means.
updateBounds(Relation<V>, WritableIntegerDataStore, WritableDoubleDataStore, WritableDoubleDataStore, double[], double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansHamerly
Update the bounds for k-means.
updateCache(int, double[], double[], int[], int, int, int, double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.hierarchical.AnderbergHierarchicalClustering
Update the cache.
updateCircumcircle(List<Vector>) - Method in class de.lmu.ifi.dbs.elki.math.geometry.SweepHullDelaunay2D.Triangle
Recompute the location and squared radius of circumcircle.
updateDB(DBIDs, Vector) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.MoveObjectsToolVisualization.Instance
Updates the objects with the given DBIDs It will be moved depending on the given Vector
updateDensities(WritableDoubleDataStore, DoubleDBIDList) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.distance.ReferenceBasedOutlierDetection
Update the density estimates for each object.
updateDistances(Relation<V>, List<Vector>, WritableDataStore<SameSizeKMeansAlgorithm<V>.Meta>, NumberVectorDistanceFunction<? super V>) - Method in class tutorial.clustering.SameSizeKMeansAlgorithm
Compute the distances of each object to all means.
updateE(NumberVector, double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.em.DiagonalGaussianModel
 
updateE(NumberVector, double) - Method in interface de.lmu.ifi.dbs.elki.algorithm.clustering.em.EMClusterModel
Update the
updateE(NumberVector, double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.em.MultivariateGaussianModel
 
updateE(NumberVector, double) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.em.SphericalGaussianModel
 
updateEigenvector(double[], double[], double) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.transform.FastMultidimensionalScalingTransform
Compute the change in the eigenvector, and normalize the output vector while doing so.
updateEstimations(int[], int, double[], double[]) - Method in class de.lmu.ifi.dbs.elki.application.greedyensemble.GreedyEnsembleExperiment
 
updateEvent(DBIDs) - Static method in class de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent
Update event.
updateFilterSDASet(double, List<OPTICSXi.SteepDownArea>, double) - Static method in class de.lmu.ifi.dbs.elki.algorithm.clustering.optics.OPTICSXi
Update the mib values of SteepDownAreas, and remove obsolete areas.
updateFromSelection() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.SelectionTableWindow
Update our selection
updateFromTrackParameters(TrackParameters) - Method in class de.lmu.ifi.dbs.elki.gui.util.DynamicParameters
Update the Parameter list from the collected options of an ELKI context
updateHeap(double, int) - Method in class de.lmu.ifi.dbs.elki.database.ids.integer.DoubleIntegerDBIDKNNHeap
Do a full update for the heap.
updateInverse() - Method in class de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation
Compute the inverse transformation matrix
updateKNNsAfterDeletion(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor
Updates the kNNs of the RkNNs of the specified ids.
updateKNNsAfterInsertion(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor
Updates the kNNs of the RkNNs of the specified ids.
updateKNNsAndRkNNs(DBIDs) - Method in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor
Updates the kNNs and RkNNs after insertion of the specified ids.
updatemask - Variable in class de.lmu.ifi.dbs.elki.visualization.VisualizationTask
The update event mask.
updateMatrix(int, double[], DBIDArrayIter, WritableDoubleDataStore, WritableIntegerDataStore, double, int, int, int, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.hierarchical.AGNES
Update the scratch distance matrix.
updateMatrix(int, double[], DBIDArrayIter, double[], int[], WritableDoubleDataStore, WritableIntegerDataStore, double, int, int, int, int) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.hierarchical.AnderbergHierarchicalClustering
Update the scratch distance matrix.
updateMatrix(double[][], double[], double) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.transform.FastMultidimensionalScalingTransform
Update matrix, by removing the effects of a known Eigenvector.
updateMeanAndAssignment(List<ModifiableDBIDs>, List<Vector>, int, V, DBIDIter, WritableIntegerDataStore) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.AbstractKMeans
Try to update the cluster assignment.
updateMeans(List<Vector>, double[][], List<ModifiableDBIDs>, int[]) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansBatchedLloyd
Merge changes into mean vectors.
updateMeta(BundleMeta) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.cleaning.DropNaNFilter
Process an updated meta record.
updateMeta(BundleMeta) - Method in class de.lmu.ifi.dbs.elki.datasource.filter.cleaning.ReplaceNaNWithRandomFilter
Process an updated meta record.
updateMeta() - Method in class de.lmu.ifi.dbs.elki.datasource.filter.cleaning.VectorDimensionalityFilter
Update metadata.
updateMinMax(V, double[], double[]) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE
Updates the minima and maxima array according to the specified feature vector.
updateNames() - Method in class de.lmu.ifi.dbs.elki.result.textwriter.naming.SimpleEnumeratingScheme
Assign names to each cluster (which doesn't have a name yet)
updateOnAny(int) - Method in class de.lmu.ifi.dbs.elki.visualization.VisualizationTask
Update if any oft these bits is set.
updateOUT(int) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.distance.HilOut.HilbertFeatures
updateOUT function inserts pf[i] in out.
updateParameterTable() - Method in class de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI
Serialize the parameter table and run setParameters().
updateParameterTable() - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel
Serialize the parameter table and run setParameters()
updateProgressBar(Progress, JProgressBar) - Method in class de.lmu.ifi.dbs.elki.gui.util.LogPanel
Update a progress bar
updateQueue - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.VisualizationPlot
Update queue.
updateRowAndColumnMeans(double[][], boolean) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.biclustering.ChengAndChurch.BiclusterCandidate
Update the row means and column means.
updaterunner - Variable in class de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGUpdateSynchronizer
The UpdateRunner we are put into
UpdateRunner - Class in de.lmu.ifi.dbs.elki.visualization.svg
Class to handle updates to an SVG plot, in particular when used in an Apache Batik UI.
UpdateRunner(Object) - Constructor for class de.lmu.ifi.dbs.elki.visualization.svg.UpdateRunner
Construct a new update handler
updates - Variable in class de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent
Updates.
updates - Variable in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.KNNChangeEvent
The ids of the kNNs that were updated due to the insertion or removals of objects.
updateSelection(OPTICSPlotSelectionVisualization.Mode, int, int) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotSelectionVisualization.Instance
Updates the selection for the given ClusterOrderEntry.
updateSelection(Projection, SVGPoint, SVGPoint) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.selection.SelectionToolAxisRangeVisualization.Instance
Update the selection in the context.
updateSelection(SelectionToolLineVisualization.Mode, SVGPoint, SVGPoint) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.selection.SelectionToolLineVisualization.Instance
Updates the selection in the context.
updateSelection(Projection, SVGPoint, SVGPoint) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionToolCubeVisualization.Instance
Update the selection in the context.
updateSelection(SelectionToolDotVisualization.Mode, Projection2D, SVGPoint, SVGPoint) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionToolDotVisualization.Instance
Updates the selection in the context.
updateSelectionRectKoordinates(double, double, double, double, ModifiableHyperBoundingBox) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.selection.SelectionToolAxisRangeVisualization.Instance
Set the selected ranges and the mask for the actual dimensions in the context
updateSelectionRectKoordinates(double, double, double, double, ModifiableHyperBoundingBox) - Method in class de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionToolCubeVisualization.Instance
Set the selected ranges and the mask for the actual dimensions in the context.
updateSizes(DBIDs, WritableDataStore<ModifiableDBIDs>, WritableIntegerDataStore) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.DWOF
This method updates each object's cluster size after the clustering step.
updateStatus() - Method in class de.lmu.ifi.dbs.elki.gui.multistep.panels.ParameterTabPanel
Invoked to update the UI when the status could have changed.
updateStyleElement(Document, Element) - Method in class de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager
Update the text contents of an existing style element.
updateStyleElement() - Method in class de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot
Update style element - invoke this appropriately after any change to the CSS styles.
UpdateSynchronizer - Interface in de.lmu.ifi.dbs.elki.visualization.svg
API to synchronize updates
updateVisualizerMenus() - Method in class de.lmu.ifi.dbs.elki.visualization.gui.ResultWindow.DynamicMenu
Update the visualizer menus.
updateWeights(WritableDoubleDataStore, DBIDs, T, DistanceQuery<? super T>) - Method in class de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.initialization.KMeansPlusPlusInitialMeans
Update the weight list.
updateWLB(int) - Method in class de.lmu.ifi.dbs.elki.algorithm.outlier.distance.HilOut.HilbertFeatures
updateWLB function inserts pf[i] in wlb.
upperHull - Variable in class de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.ConvexHull
The upper hull.
usage(Collection<TrackedParameter>) - Static method in class de.lmu.ifi.dbs.elki.application.AbstractApplication
Returns a usage message, explaining all known options
usage - Variable in class de.lmu.ifi.dbs.elki.visualization.gui.overview.RectangleArranger
Map indicating which cells are used.
usebulk - Static variable in class de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor
Flag to use bulk operations.
used - Variable in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.MergedParameterization
Parameters to rewind.
useDefaultValue() - Method in class de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.AbstractParameter
 
useDefaultValue() - Method in interface de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter
Sets the default value of this parameter as the actual value of this parameter.
usegzip - Variable in class de.lmu.ifi.dbs.elki.result.textwriter.MultipleFilesOutput
Control gzip compression of output.
useinverted - Variable in class de.lmu.ifi.dbs.elki.algorithm.clustering.biclustering.ChengAndChurch
Allow inversion of rows in the last phase.
useMarker(SVGPlot, Element, double, double, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.style.marker.CircleMarkers
Use a given marker on the document.
useMarker(SVGPlot, Element, double, double, int, double) - Method in interface de.lmu.ifi.dbs.elki.visualization.style.marker.MarkerLibrary
Insert a marker at the given coordinates.
useMarker(SVGPlot, Element, double, double, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.style.marker.MinimalMarkers
Use a given marker on the document.
useMarker(SVGPlot, Element, double, double, int, double) - Method in class de.lmu.ifi.dbs.elki.visualization.style.marker.PrettyMarkers
 
usemean - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling.Parameterizer
Use the mean for scaling
usemean - Variable in class de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling
Use the mean for scaling
USER_REQUESTED_HELP - Static variable in interface de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages
Message when the user requested a help message.
ustart - Variable in class de.lmu.ifi.dbs.elki.datasource.parser.CategorialDataAsNumberVectorParser
Base for enumerating unique values.
Util() - Constructor for class de.lmu.ifi.dbs.elki.evaluation.clustering.ClusterContingencyTable.Util
 
Util - Class in de.lmu.ifi.dbs.elki.utilities
This class collects various static helper methods.
Util() - Constructor for class de.lmu.ifi.dbs.elki.utilities.Util
Fake constructor: do not instantiate.
Util.ForwardComparator - Class in de.lmu.ifi.dbs.elki.utilities
Regular comparator.
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ELKI Version 0.7.0~20150828

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